2XN1,3MI6


Conserved Protein Domain Family
Glyco_hydro_36N

?
pfam16875: Glyco_hydro_36N (this model, PSSM-Id:407116 is obsolete and has been replaced by 435621)
Click on image for an interactive view with Cn3D
Glycosyl hydrolase family 36 N-terminal domain
This domain is found at the N-terminus of many family 36 glycoside hydrolases. It has a beta-supersandwich fold.
Statistics
?
PSSM-Id: 407116
Aligned: 243 rows
Threshold Bit Score: -1
Created: 21-May-2020
Updated: 7-Aug-2020
Structure
?
Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
2XN1_D                   32 GTLSHLYFGGAVknynnqlkYPRLDRGFSGNL---PESld----------rTFSRdslpkeYSSAGEMDFHTPATIVR-- 96  Lact...
WP_011743871             39 DLPRFVHWGRPL-------------TAPETVIntfDALapqrvsgaldytaWPSV------LPTQSEAWSGSDRFDVR-- 97  Bifi...
WP_007056897             40 DLPHIVHWGRPL-------------AKPDTLLaayDALkpqrvsgalddtaWPSI------LPTQAESWIGEQRVVLR-- 98  Bifi...
WP_014760786             39 GLPRFVHWGRPL-------------AAPGTVLaayDALrpqrvsgaldetaWPSI------MPTQSESWIGAPRLDIR-- 97  Bifi...
jgi:Jden_2479            39 HLPRILYWGEEL-----------TGITDTSLAalaTMTtpsatggtidtpaITSI------ITEPSSGWPGTPGLTGS-- 99  Jone...
jgi:Namu_1776            27 GLPTVLYWGPAL-----------SELSSADLVelrRATqapfgdsridvpeRVSV------LPTPAEGWVGRPGIAGS-- 87  Naka...
BAJ75041                 29 ALPTILHWGPEV--------------PAGDEDellVATagpvgdslvqaqpQVGV------LPLHSRGWLGHPGLRGS-- 86  Micr...
jgi:Intca_3457           28 TIPRVLHWGPDL-----------GDLDDAALSavaDAArpttgdsvvthqtSVPL------VPQHGTGWLGRPGIAGNri 90  Intr...
jgi:Sked_31550           19 GLPTIVHWGHDL-----------GDAAQADLDglaLAAepqrvsggldvpaRLTL------LPLDAAGWLGTPGLEGH-- 79  Sang...
noaausda:RSal33209_0148  31 RMPRIIYWGAAI--------DQNGPLATAELAalsLAGapqrvsggidlpaRLSL------LPQESEGSQHLPGLQGH-- 94  Reni...
WP_011743871             39 DLPRFVHWGRPL-------------TAPETVIntfDALapqrvsgaldytaWPSV------LPTQSEAWSGSDRFDVR-- 97  Bifi...
WP_007056897             40 DLPHIVHWGRPL-------------AKPDTLLaayDALkpqrvsgalddtaWPSI------LPTQAESWIGEQRVVLR-- 98  Bifi...
WP_014760786             39 GLPRFVHWGRPL-------------AAPGTVLaayDALrpqrvsgaldetaWPSI------MPTQSESWIGAPRLDIR-- 97  Bifi...
jgi:Jden_2479            39 HLPRILYWGEEL-----------TGITDTSLAalaTMTtpsatggtidtpaITSI------ITEPSSGWPGTPGLTGS-- 99  Jone...
jgi:Namu_1776            27 GLPTVLYWGPAL-----------SELSSADLVelrRATqapfgdsridvpeRVSV------LPTPAEGWVGRPGIAGS-- 87  Naka...
BAJ75041                 29 ALPTILHWGPEV--------------PAGDEDellVATagpvgdslvqaqpQVGV------LPLHSRGWLGHPGLRGS-- 86  Micr...
jgi:Intca_3457           28 TIPRVLHWGPDL-----------GDLDDAALSavaDAArpttgdsvvthqtSVPL------VPQHGTGWLGRPGIAGNri 90  Intr...
jgi:Sked_31550           19 GLPTIVHWGHDL-----------GDAAQADLDglaLAAepqrvsggldvpaRLTL------LPLDAAGWLGTPGLEGH-- 79  Sang...
noaausda:RSal33209_0148  31 RMPRIIYWGAAI--------DQNGPLATAELAalsLAGapqrvsggidlpaRLSL------LPQESEGSQHLPGLQGH-- 94  Reni...
2XN1_D                   97 ---NpDG-SNALFLAYKSY---KI-----EDGkPdlkglphs--wtkeddeaQTLIVTLEDKVSKLEYDLLYTIyRDRPV 162 Lact...
WP_011743871             98 ---R-DGvELFCKFQVTDIkaeTVaagktYTMaekdgypsw--svasepkqtPTVTVTAEDVEQCVKLTWTCEL-DETGL 170 Bifi...
WP_007056897             99 ---R-AGvELFPKFTVTNIeagGVleatlDAVsgesytdvagharatgpvrvPGVIVTARDEEQGVEVEWHLEL-LPGGL 173 Bifi...
WP_014760786             98 ---R-AGvTPFCAFTVTGIairQDerqgvDVSdgvdgaa------htvtqqvPVVTVTASDTEQGVELSWTAEL-LPGGL 166 Bifi...
jgi:Jden_2479           100 ---R-NGqAWTTAFRVTGYdlaTTda------gD------------------LTTRWYATDTDAALTITLTITL-LVTGI 150 Jone...
jgi:Namu_1776            88 ---S-NGqAFSPLFRLLVTeivERse-----tvA------------------TGFRYHAADPTAELDLALDVEL-THSGL 139 Naka...
BAJ75041                 87 ---R-AGrAWSFDPSTVTHdvgDTpg------eP------------------ARLVSVAVDEVDRLEVTTELLL-EPSGL 137 Micr...
jgi:Intca_3457           91 vdgR-PGpGWSPLFTSVQHaraDSd-------aV------------------CRLVSEGTDPVAELFLTTEVEV-HPSGL 143 Intr...
jgi:Sked_31550           80 ---R-SGrVFSPSFALSTVehgP-----------------------------STATITAVDDHGALTLVVELEV-SDAGL 125 Sang...
noaausda:RSal33209_0148  95 ---R-AGrAAFPDFRVQKFdvgK-----------------------------NHVAIQAVDSDAELLLDVELEL-TASGL 140 Reni...
WP_011743871             98 ---R-DGvELFCKFQVTDIkaeTVaagktYTMaekdgypsw--svasepkqtPTVTVTAEDVEQCVKLTWTCEL-DETGL 170 Bifi...
WP_007056897             99 ---R-AGvELFPKFTVTNIeagGVleatlDAVsgesytdvagharatgpvrvPGVIVTARDEEQGVEVEWHLEL-LPGGL 173 Bifi...
WP_014760786             98 ---R-AGvTPFCAFTVTGIairQDerqgvDVSdgvdgaa------htvtqqvPVVTVTASDTEQGVELSWTAEL-LPGGL 166 Bifi...
jgi:Jden_2479           100 ---R-NGqAWTTAFRVTGYdlaTTda------gD------------------LTTRWYATDTDAALTITLTITL-LVTGI 150 Jone...
jgi:Namu_1776            88 ---S-NGqAFSPLFRLLVTeivERse-----tvA------------------TGFRYHAADPTAELDLALDVEL-THSGL 139 Naka...
BAJ75041                 87 ---R-AGrAWSFDPSTVTHdvgDTpg------eP------------------ARLVSVAVDEVDRLEVTTELLL-EPSGL 137 Micr...
jgi:Intca_3457           91 vdgR-PGpGWSPLFTSVQHaraDSd-------aV------------------CRLVSEGTDPVAELFLTTEVEV-HPSGL 143 Intr...
jgi:Sked_31550           80 ---R-SGrVFSPSFALSTVehgP-----------------------------STATITAVDDHGALTLVVELEV-SDAGL 125 Sang...
noaausda:RSal33209_0148  95 ---R-AGrAAFPDFRVQKFdvgK-----------------------------NHVAIQAVDSDAELLLDVELEL-TASGL 140 Reni...
2XN1_D                  163 IVRSVQVHN---HGEEa-----VYLEKVASMqMDYV-DKDfEVITLPGAHANERRVQRENIGQGIKVFSSYRGTSSHQMN 233 Lact...
WP_011743871            171 IRQHAEVTN---TGEGr-----LEIGKIELA-FSVPaDAN-EILTTTGHHLRERSPQRQDFTIGRFAKSSMIGRPDFDAT 240 Bifi...
WP_007056897            174 VRQKATVTNlfgADAGa----pLEIGKIELG-FPLPeSAG-EILTTTGHHLRERSPQRQPLTVGRFEKPQLAGRPDFDAS 247 Bifi...
WP_014760786            167 IRQRTTLRN---LPAGnlptgdLEVGKVELG-FPLPaLAT-EILTTTGHHLRERSPQRQPLTEGRFEKVSMAGRPGFDAS 241 Bifi...
jgi:Jden_2479           151 VRAHAAVTN---AGDTp-----YQVDHLGVA-FPFPaEAT-EALDFTGRWARERAPQRRPLTVGTHLREAVRGKPGHDAP 220 Jone...
jgi:Namu_1776           140 VRLRAALIN---QGSSt-----YQLDGLVLA-LPVPtRAD-ELFDFTGRHTRERSPQRSPFQVGTHARESRQGRPGLDSP 209 Naka...
BAJ75041                138 VRVRAGVRN---LGDAd-----YELTVLEPA-LPVPaVAD-EILDMTGRHAHERHPQRGAFRQGRWTREAWGGRPGHDSA 207 Micr...
jgi:Intca_3457          144 VRVRATLRN---DGTTp-----YVVGGLECA-LPVPaAAD-ELLHLTGHHTRERMPQRQPFTVGQLVREARGGRAGHDAT 213 Intr...
jgi:Sked_31550          126 VRQRLSLTN---TGPDd-----YSLLALAAT-FPLPaQAT-EIMDTTGRHLRERSPQRRALTVGTHLRESRKGRPGADAT 195 Sang...
noaausda:RSal33209_0148 141 LRQRLSVQN---TGESr-----YEVIALNST-FPFPaNAT-EILDTTGRHLKERSPQRRSLTVGAHVREGRRGRTGADGP 210 Reni...
WP_011743871            171 IRQHAEVTN---TGEGr-----LEIGKIELA-FSVPaDAN-EILTTTGHHLRERSPQRQDFTIGRFAKSSMIGRPDFDAT 240 Bifi...
WP_007056897            174 VRQKATVTNlfgADAGa----pLEIGKIELG-FPLPeSAG-EILTTTGHHLRERSPQRQPLTVGRFEKPQLAGRPDFDAS 247 Bifi...
WP_014760786            167 IRQRTTLRN---LPAGnlptgdLEVGKVELG-FPLPaLAT-EILTTTGHHLRERSPQRQPLTEGRFEKVSMAGRPGFDAS 241 Bifi...
jgi:Jden_2479           151 VRAHAAVTN---AGDTp-----YQVDHLGVA-FPFPaEAT-EALDFTGRWARERAPQRRPLTVGTHLREAVRGKPGHDAP 220 Jone...
jgi:Namu_1776           140 VRLRAALIN---QGSSt-----YQLDGLVLA-LPVPtRAD-ELFDFTGRHTRERSPQRSPFQVGTHARESRQGRPGLDSP 209 Naka...
BAJ75041                138 VRVRAGVRN---LGDAd-----YELTVLEPA-LPVPaVAD-EILDMTGRHAHERHPQRGAFRQGRWTREAWGGRPGHDSA 207 Micr...
jgi:Intca_3457          144 VRVRATLRN---DGTTp-----YVVGGLECA-LPVPaAAD-ELLHLTGHHTRERMPQRQPFTVGQLVREARGGRAGHDAT 213 Intr...
jgi:Sked_31550          126 VRQRLSLTN---TGPDd-----YSLLALAAT-FPLPaQAT-EIMDTTGRHLRERSPQRRALTVGTHLRESRKGRPGADAT 195 Sang...
noaausda:RSal33209_0148 141 LRQRLSVQN---TGESr-----YEVIALNST-FPFPaNAT-EILDTTGRHLKERSPQRRSLTVGAHVREGRRGRTGADGP 210 Reni...
2XN1_D                  234 PFMALVDHDTNEFMGEAYGFALAYSGNHKFEVERDQFGQiHVNTGINDYNFK-WKLN 289 Lactobacillus acidophilus NCFM
WP_011743871            241 LLLSVGEHGFGFTHGNVYSAHVAWSGNSVLSAERLPYTT-GVIGGSEVLFGGeVGLE 296 Bifidobacterium adolescentis
WP_007056897            248 LLLTAGVPGFGFEHGDAYSVHVGWSGNSVLSAERLPYTT-GVIGGGELLFGGeVTLA 303 Bifidobacterium longum
WP_014760786            242 LLLSAGEPGFGFEHGEVYSVHVGWSGNSVLSAERQPYTT-GLIGGGEVLLGGeATLA 297 Bifidobacterium bifidum
jgi:Jden_2479           221 YLTVVGEPHFGFRHGEVRAFHLAWSGNQRIAIDTTFSGE-QVVRAGEYLHPGeIQLA 276 Jonesia denitrificans DSM 2...
jgi:Namu_1776           210 FLLAAGTTGFGWESGQLWGLHVGWSGNQVSYAERMYNGL-KMIGGGELILPGeVRLE 265 Nakamurella multipartita DS...
BAJ75041                208 TVLCAGETGFGFRRGLVWGVHLAWSGNGAVSAERTATGW-RMLSGGEKPLPGeIVLA 263 Microbacterium testaceum St...
jgi:Intca_3457          214 TIVAAGVPGFGWRSGRVWSVHVAWNGNQVTVAERTDGGW-RLLRGGELLLPGeIVLD 269 Intrasporangium calvum DSM ...
jgi:Sked_31550          196 LLLAAGTPGFGFERGQVHAVHVAWSGNHRLAAERTVTAE-SALTAGELLAPGeVDLA 251 Sanguibacter keddieii DSM 1...
noaausda:RSal33209_0148 211 LLLAAGTSGFGFNRGTVHAVHLAWSGNYRLSAERTVEAD-NFFSAAELLLPGeMTLA 266 Renibacterium salmoninarum ...
WP_011743871            241 LLLSVGEHGFGFTHGNVYSAHVAWSGNSVLSAERLPYTT-GVIGGSEVLFGGeVGLE 296 Bifidobacterium adolescentis
WP_007056897            248 LLLTAGVPGFGFEHGDAYSVHVGWSGNSVLSAERLPYTT-GVIGGGELLFGGeVTLA 303 Bifidobacterium longum
WP_014760786            242 LLLSAGEPGFGFEHGEVYSVHVGWSGNSVLSAERQPYTT-GLIGGGEVLLGGeATLA 297 Bifidobacterium bifidum
jgi:Jden_2479           221 YLTVVGEPHFGFRHGEVRAFHLAWSGNQRIAIDTTFSGE-QVVRAGEYLHPGeIQLA 276 Jonesia denitrificans DSM 2...
jgi:Namu_1776           210 FLLAAGTTGFGWESGQLWGLHVGWSGNQVSYAERMYNGL-KMIGGGELILPGeVRLE 265 Nakamurella multipartita DS...
BAJ75041                208 TVLCAGETGFGFRRGLVWGVHLAWSGNGAVSAERTATGW-RMLSGGEKPLPGeIVLA 263 Microbacterium testaceum St...
jgi:Intca_3457          214 TIVAAGVPGFGWRSGRVWSVHVAWNGNQVTVAERTDGGW-RLLRGGELLLPGeIVLD 269 Intrasporangium calvum DSM ...
jgi:Sked_31550          196 LLLAAGTPGFGFERGQVHAVHVAWSGNHRLAAERTVTAE-SALTAGELLAPGeVDLA 251 Sanguibacter keddieii DSM 1...
noaausda:RSal33209_0148 211 LLLAAGTSGFGFNRGTVHAVHLAWSGNYRLSAERTVEAD-NFFSAAELLLPGeMTLA 266 Renibacterium salmoninarum ...
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap