3JB9


Conserved Protein Domain Family
EFTUD2

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pfam16004: EFTUD2 (this model, PSSM-Id:406414 is obsolete and has been replaced by 464968)
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116 kDa U5 small nuclear ribonucleoprotein component N-terminus
Statistics
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PSSM-Id: 406414
Aligned: 129 rows
Threshold Bit Score: 69.483
Created: 21-May-2020
Updated: 7-Aug-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3JB9_B          5 DLYDEFGNYI--------------GpENEEDeEElfpqapsptiaqvpsfeevip------------------deeledv 52   Schizosacchar...
A0BVQ2          5 NNYDEFGNYI--------------GpEIDSEeEDnvqieeeqmaendq-------------------------------- 38   Paramecium te...
EFA79966       36 gvdddeGNDLt-------------GiDMSRDdADrdndedhdhhsnglng---------------------------ngr 75   Heterostelium...
EGG17824        5 PIFDEFGNLI-------------------EDvEDienideqqdydddeeervardeqqnght---taadgdgdepmvqee 62   Cavenderia fa...
Q54R72          4 NLYDEFGNYI--------------GeSL-ED-EEvtydqqqqqqeeeeeedrkpnqqqqqqqynddeahieetgdndggd 67   Dictyostelium...
EGC33460        6 ELWDEFGNYI--------------GpDLDEN-EDqlyeieqqaqqeqeedhketngynqd-------ephieetndddee 63   Dictyostelium...
Q5CU80          5 DVYDEFGNYIvkddndsegsadwvGsEETSDpEDshnnkdgeifdhaqkeesedsgsdifsenewqkhkgqvkilnkqsi 84   Cryptosporidi...
XP_002142411    5 EIYDEFGNYI--------------GtESESN-LDleisldededqssdsqknpthdpt------------evddvkming 57   Cryptosporidi...
CCE84442        4 DLYDEFGNPI--------------GgQDDEQfDSessnasnlahsddea------------------------------s 39   Millerozyma f...
XP_001485790    4 DDYDEFGNLI--------------GdPLDSD-ADsssdaesishidsrdhsgenp------------------lnsvpid 50   Meyerozyma gu...
3JB9_B         53 eraeemalshlepQNAVVLHED--KQYY-----PSAEE------VYGSNVDIMVQEQDTQPLSQPIIEPIRHKRIAIETT 119  Schizosacchar...
A0BVQ2         39 ehvianrvyipnqQVAVILNED--KQYY-----PDAQQ------VYGRDVEINVQEEDAQPITQPMIAPLKSKEFDIQET 105  Paramecium te...
EFA79966       76 qqndrmevdnelkSNAIVLHED--KKYF-----PDASE------VY-HGAEVMVQDEDTQPISKPIIAPTRTRTFALTEQ 141  Heterostelium...
EGG17824       63 eedshvefktrqpGNAIVLHED--KQYY-----PDASE------VYGQDVEVMVQDEDTQPISKPVIDPGSKRSFLVADK 129  Cavenderia fa...
Q54R72         68 emnidrdniqistTSAIVLHED--KQYF-----PDASD------VY-KGVEVMVQDEDSQPLSKPIIDPKKNKSFTITEK 133  Dictyostelium...
EGC33460       64 rmnldnnirqvttSSAIVLHED--KQYY-----PDAND------VY-KGVEVMVQDEDTQPLSKPIINPQKNKTVSIQEK 129  Dictyostelium...
Q5CU80         85 kdedhemtqetddDNKIVQFED--KEYY-----PDPSD------VYGDDVEILVQEEDHQHIDEPLISPLKENKFDLIEK 151  Cryptosporidi...
XP_002142411   58 inrivdgmdiemdNEAIILHEH--KEYY-----EDADK------IFGKDVEILFEDEDMHHIDTPTIVPLKDNKFDLVEG 124  Cryptosporidi...
CCE84442       40 esgvddemrndeaETNLVLHADagKEHTiedvdADSHKalslktVYGKGVETIVASEDVPMEDEPVIKPLTETKMKVEYT 119  Millerozyma f...
XP_001485790   51 kdaktaslrdndnSMAITRNEG--KQVG-----LKS--------TFGPEVETIIVKPTMEQKDEPVILPDIQKKLRLVld 115  Meyerozyma gu...
3JB9_B        120 NVP 122  Schizosaccharomyces pombe 972h-
A0BVQ2        106 QIP 108  Paramecium tetraurelia
EFA79966      142 DLP 144  Heterostelium album PN500
EGG17824      130 ELP 132  Cavenderia fasciculata
Q54R72        134 DYP 136  Dictyostelium discoideum AX4
EGC33460      130 DYP 132  Dictyostelium purpureum
Q5CU80        152 NLK 154  Cryptosporidium parvum
XP_002142411  125 DIn 127  Cryptosporidium muris RN66
CCE84442      120 DFE 122  Millerozyma farinosa CBS 7064
XP_001485790  116 esl 118  Meyerozyma guilliermondii ATCC 6260
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