6GEN,6GEN


Conserved Protein Domain Family
TIP49

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pfam06068: TIP49 (This model is not part of the current CDD release)
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TIP49 C-terminus
This family consists of the C-terminal region of several eukaryotic and archaeal RuvB-like 1 (Pontin or TIP49a) and RuvB-like 2 (Reptin or TIP49b) proteins. The N-terminal domain contains the pfam00004 domain. In zebrafish, the liebeskummer (lik) mutation, causes development of hyperplastic embryonic hearts. lik encodes Reptin, a component of a DNA-stimulated ATPase complex. Beta-catenin and Pontin, a DNA-stimulated ATPase that is often part of complexes with Reptin, are in the same genetic pathways. The Reptin/Pontin ratio serves to regulate heart growth during development, at least in part via the beta-catenin pathway. TBP-interacting protein 49 (TIP49) was originally identified as a TBP-binding protein, and two related proteins are encoded by individual genes, tip49a and b. Although the function of this gene family has not been elucidated, they are supposed to play a critical role in nuclear events because they interact with various kinds of nuclear factors and have DNA helicase activities.TIP49a has been suggested to act as an autoantigen in some patients with autoimmune diseases.
Statistics
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PSSM-Id: 399217
Aligned: 15 rows
Threshold Bit Score: 497.217
Created: 21-Aug-2024
Updated: 4-Dec-2024
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
6GEN_Y        19 LIAAHSHITGLG------LDENL--------------------------------------------------------- 35  Saccharomyces c...
Q8IIU3        18 RVNIHSHIKGLGvntniyLHENE--------------------------------------------------------- 40  Plasmodium falc...
Q9GZH2        17 RTSVHSHITGLG------LNDRL--------------------------------------------------------- 33  Caenorhabditis ...
Q8SU27        11 RINLHSHIAGLG------CDGD---------------------------------------------------------- 26  Encephalitozoon...
XP_002933113  14 RIATHSHVKGLG------LDENG--------------------------------------------------------- 30 
Q9C0X6        15 RITTHSHIKGLG------LKEDG--------------------------------------------------------- 31  Schizosaccharom...
Q8WZS3        15 RTAAHTHIKGLG------LNSQG--------------------------------------------------------- 31  Neurospora cras...
6GEN_V        23 RTAAHTHIKGLG------LDESG--------------------------------------------------------- 39  Saccharomyces c...
Q8IAT2        12 RISLHSHISGLG------LDADGyvtdflfeenikkrdmyseptnkienndikngtildpdkvdnicnsyklenngnyen 85  Plasmodium falc...
O28462        14 RISAHSHIRGLG------LDENL--------------------------------------------------------- 30  Archaeoglobus f...
6GEN_Y        36 -------QPRPTSE---------GMVGQLQARRAAGVILKMVQNGTIAGRAVLVAGPPSTGKTALAMGVSQSLG-KDVPF 98  Saccharomyces c...
Q8IIU3        41 -------ISLSDEKysmffdnscGLVGQFKAREASLFLVDLIKQKKLAGKCILLAGPSGSGKSALAIGISREIN-RKMPF 112 Plasmodium falc...
Q9GZH2        34 -------EAEYVSG---------GMVGQVAARQAAGLIVKMIQEGKIAGRALLVTGEPGAGKTAIAIAISKELG-EDTPF 96  Caenorhabditis ...
Q8SU27        27 -------EVEYDKD---------GLVGQIKARKAMAVIRKMVESNK-GGKVVLIKGDRGSGKTALAIGLSKSLG--GVHF 87  Encephalitozoon...
XP_002933113  31 -------MAKQAAA---------GLVGQENAREACGVIVELIKSKKMAGRAVLLAGPPGTGKTALALAIAQELG-NKVPF 93 
Q9C0X6        32 -------TCESVGG---------GFIGQEKAREACGIITDLIKSKKFGGKGVLFAGGAGTGKTALALAIAQELG-PKVPF 94  Schizosaccharom...
Q8WZS3        32 -------IAEKQAS---------GFVGQTTAREACGVVVDLIKAHKMAGRGVLLAGGPGTGKTALALAISQELG-TKIPF 94  Neurospora cras...
6GEN_V        40 -------VAKRVEG---------GFVGQIEAREACGVIVDLIKAKKMSGRAILLAGGPSTGKTALALAISQELG-PKVPF 102 Saccharomyces c...
Q8IAT2        86 nkicynnISDDEDEvvknfykckGMVGQKKAREAAGIFINLIKEKNIC-KCLLLAGPSGSGKTAIAIAISKEISdESIPF 164 Plasmodium falc...
O28462        31 -------RAKDVAD---------GLVGQKRAREAAGVIVRLIKSGKMAGRGILMAGPPGTGKTAIAVAISKELG-KDIPF 93  Archaeoglobus f...
6GEN_Y        99 TAIAGSEIFSLELSKTEALTQAFRKSIGIKIKEETELIEGEVVEIQI---DRSIT----GGHKQGKLTIKTTDMETIYEL 171 Saccharomyces c...
Q8IIU3       113 VFLSGSEVYSNEIKKTEVILEAFRKSIHIKIKEEKLVYEGEVVDMVVeenECLYSlnkaKQINAIIITLKSVKGSKTLRL 192 Plasmodium falc...
Q9GZH2        97 VSIVASEIYSNEINKTEALTQAFRRALGIQIKEETEVLEGEVISLEV---DRSANg---MGPKVGKLTMRTTDMETIYDL 170 Caenorhabditis ...
Q8SU27        88 NSISGTEIYSLEMSKSEAITQALRKSVGLRIKESVKVIEGEVVSL-----------------SGRRIVLKTVDMESSFEI 150 Encephalitozoon...
XP_002933113  94 CPMVGSEVYSTEIKKTEVLMENFRRAIGLRIRETKEVYEGEVTELTPcetENPMGgy-gKTISHVIIGLKTAKGTKQLKL 172
Q9C0X6        95 CPMVGSEVYSSEIKKTEALMENFRRAIGLRVKETKEVYEGEVTEMVPeeaENPLGgy-gKTISHVLLGLKTHKGTKQLKL 173 Schizosaccharom...
Q8WZS3        95 CPITGSEIYSTEVKKTEVLMENFRRAIGLKVRETKEVYEGEVTELTPeeaENPLGgy-gKTITTLLIGLKSAKGQKKLRL 173 Neurospora cras...
6GEN_V       103 CPLVGSELYSVEVKKTETLMENFRRAIGLRIKETKEVYEGEVTELTPedaENPLGgy-gKTISHVIVGLKSAKGTKTLRL 181 Saccharomyces c...
Q8IAT2       165 CIFNASQVYSCEVKKTEILTQYIRKSIGVKIKEIKEVFEGEVVQIEPf-fDNTYDe---QKISYVHITLKTLKEQKKIKI 240 Plasmodium falc...
O28462        94 VQVSASEFYSAEMKKTEALIQAMRKAIGVRIRETRTVLEGEVVGLDYnmvPNPYNpt-qKIPESATLTLATKDEKRTFSV 172 Archaeoglobus f...
6GEN_Y       172 GNKMIDGLTKEKVLAGDVISIDKASGKITKLGRSFARSRDYDAmgADTRFVQCPEGELQKRKTVVHTVSLHEIDVINSRT 251 Saccharomyces c...
Q8IIU3       193 APKIHEQIAREKIKIGDVIYIETNTGHVKRLGRCNDYAKEYDI--EFDEYVSLPKGEVHKKKEVVQQISLHDIDLANANP 270 Plasmodium falc...
Q9GZH2       171 GSKMVDACLKEKVMPGDVIQVDKASGRVTRLGRSFNRSHDYDAmgPKVKLVQCPDGEIQKRRETVHTVCLHDIDVINSRT 250 Caenorhabditis ...
Q8SU27       151 GEKMRGELDKEKVSAGDVIRIVRERGRVYKIGTSMVKRS--DVvgTDTRFVPCPEGELIRITEETQEISLHDIDVVNSKA 228 Encephalitozoon...
XP_002933113 173 DPSIYESLQKERVEVGDVIYIEANSGAVKRQGRCDTYATEFDL--EAEEYVPLPKGDVHKKKEVIQDVTLHDLDVANARP 250
Q9C0X6       174 DPSIYESLQREQVSTGDVIYIEANTGAVKRVGRSDAYATEFDL--EAEEYVPMPKGEVHKRKEIVQDVTLHDLDIANARP 251 Schizosaccharom...
Q8WZS3       174 DPSIYEAIQKERVTVGDVIYIEANTGACKRVGRSDAYATEFDL--EAEEYVPIPKGEVHKKKEIVQDVSLHDLDVANARP 251 Neurospora cras...
6GEN_V       182 DPTIYESIQREKVSIGDVIYIEANTGAVKRVGRSDAYATEFDL--ETEEYVPLPKGEVHKKKEIVQDVTLHDLDVANARP 259 Saccharomyces c...
Q8IAT2       241 HSSIYDNLLKEKIQEKDIIYIESHSGNVKRVGKCSLYQDMFDI--ETDTFVDLPKGNVHKKKNIIQNITLYDLDVSNVQP 318 Plasmodium falc...
O28462       173 GGRLAMQFFTQGIEVGDVIVIDKETGRIGKLGRSEKAKKKYDL--GDDEVVPVPSGKVEKEKEFTYVVTLHDLDEANARR 250 Archaeoglobus f...
6GEN_Y       252 ---QGFLALF----TGDTGEIRSEVRDQINTKVAEWKEEGKAEIVPGVLFIDEVHMLDIECFSFINRALEDEFAPIVMMA 324 Saccharomyces c...
Q8IIU3       271 tvgEDLASVLnsylRPKKTEITEKLRVEINKTVNKFLESGLAEIIPGVLYIDEAHMLDIECFSYLNRAIESPLAPILIMA 350 Plasmodium falc...
Q9GZH2       251 ---QGYVALF----SGDTGEIKAEVRDQINKKVLEWREEGKAKFVPGVLFIDEAHMLDIECFSFLNRAIEGELSPLIIMA 323 Caenorhabditis ...
Q8SU27       229 ---EGYLALF----SGETGEIRAETRDEVNKKVWGWINEGKAEIVRGVLFIDEVHMLDIESFAFLNKAVEEDFCPVILVS 301 Encephalitozoon...
XP_002933113 251 qggQDILSMMgqlmKPKKTEITDKLRAEINKVVNKYIDQGIAELVPGVLFIDEVHMLDIECFTYLHRALESSLAPIVIFA 330
Q9C0X6       252 qggQDIMSMMgqlmKPKKTEITDKLRGEINKVVNKYIEQGIAELIPGVLFIDEVHMLDIECFTYLNQALESTISPIVIFA 331 Schizosaccharom...
Q8WZS3       252 qggQDIMSMMgqlmKPKMTEITDKLRSEINKVVSKYIDQGVAELVPGVLFIDEAHMLDVECFTYLNKALESPISPIVVLA 331 Neurospora cras...
6GEN_V       260 qggQDVISMMgqllKPKKTEITEKLRQEVNKVVAKYIDQGVAELIPGVLFIDEVNMLDIEIFTYLNKALESNIAPVVVLA 339 Saccharomyces c...
Q8IAT2       319 ---KDNILDFlqnnKSKKTEITDKLRNEINKIVYKYVDQGIAQIIPGVLFIDEVHMLDIECFTYLNRTLESNLAPVVILA 395 Plasmodium falc...
O28462       251 ---TSIFSLF----SPPSREIDNEVREAVDEQVKRLVEEGRAELVPGVLFIDETHLMDIELFAFMNRAMESEMAPIIILA 323 Archaeoglobus f...
6GEN_Y       325 TNRGVSKTRGT-NYKSPHGLPLDLLDRSIIITTKSYNEQ 362 Saccharomyces cerevisiae S288C
Q8IIU3       351 TNRGICTVKGT-DNIEPHGIPVDLLDRLIIIKTFPYTLK 388 Plasmodium falciparum 3D7
Q9GZH2       324 TNRLIEKVRGT-DVESAHGIPSDFLDRMLIINAIPYTKE 361 Caenorhabditis elegans
Q8SU27       302 TNKGECIVRGT-DEPSPYGIPRDFIDRALIISMEKHCRR 339 Encephalitozoon cuniculi GB-M1
XP_002933113 331 TNRGNCIIRGTeDVASPHGIPLDLLDRVMIIRTMLYTPQ 369
Q9C0X6       332 SNRGICTIRGTeDIQAPHGIPTDLLDRLLIVRTLPYSES 370 Schizosaccharomyces pombe 972h-
Q8WZS3       332 SNRGMTGIRGAeDLVAAHGIPPDFLSRLLIIPTTAYDPE 370 Neurospora crassa OR74A
6GEN_V       340 SNRGMTTVRGTeDVISPHGVPPDLIDRLLIVRTLPYDKD 378 Saccharomyces cerevisiae S288C
Q8IAT2       396 TNRGICNIKGT-NIISAHGIPVDLLDRIIIVKTMLYNKE 433 Plasmodium falciparum 3D7
O28462       324 SNRGFSRIRGT-DIVAPHGIPLDLLDRLLIITTEPYSRE 361 Archaeoglobus fulgidus
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