4XUO,3P6B,3OEA


Conserved Protein Domain Family
CBM_4_9

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pfam02018: CBM_4_9 
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Carbohydrate binding domain
This family includes diverse carbohydrate binding domains.
Statistics
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PSSM-Id: 396553
Aligned: 47 rows
Threshold Bit Score: 55.532
Created: 21-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
4XUO_A           8 GDILLSHSFEE------------------GTTQGWTARGG----------VKVDVTaeq--ayQGKQSLQTTGRt----- 52   Paenibacillu...
Q08166          35 VNQIRNGDFSS-------------------GTAPWWGTEN----------IQLNVT-------DGMLCVDVPGGtv---- 74   Thermobifida...
jgi:Ccel_0732   33 GDLIRNHTFDN------------------RVGLPWHVVESyp------akASFEITs------DGKYKITAQKIgeagkg 82  
Q59325          40 NDLLYERTFDE------------------GLCYPWHTCEDsg------gkCSFDVVdvpgqpgNKAFAVTVLDKgq---- 91   Hungateiclos...
3P6B_A          35 NDLLYERTFDE------------------GLCFPWHTCEDsggk---cdfAVVDVPge---pgNKAFRLTVIDKgq---- 86   Acetivibrio ...
Q60039         490 YEQINNGTFDEpivn-----------dqaNNPDEWFIWQAgdygisgarvSDYGVT-------DGYAYITIEDSgt---- 547  Thermotoga n...
Q59328        1177 SALILNGTFDD-------------------GMDHWLLYWGdg-------eGNCDVT-------DGELEINITKVgt---- 1219 Hungateiclos...
Q60039          18 QNILHNGSFDApiliagvdieppaadgsiNTQNNWVFFTNsn------geGEARVE-------NGVLVVEITNGgd---- 80   Thermotoga n...
Q59328         693 GNYIYNGGFDVddsaav-------gvdgvPYTSYWTFLTAsg------gaATVNVE-------EGVMHVQIENGgt---- 748  Hungateiclos...
Q59328         868 GNYIYNGTFDQg----------------pNRMGFWNFVVDst------akATYYIGsd---vnERRFETRIEKGgt---- 918  Hungateiclos...
4XUO_A          53 eAWNGPSLSLTDVVHKNEVVEISGYVKLvagsapaDLKFTVERRDGngdtQYDQVNAa-----EQVTD-QKWVKLQGQYS 126  Paenibacillu...
Q08166          75 nPWDVIIGQDDIPLIEGESYAFSFTASStv---pvSIRALVQEPVE----PWTTQMDe-----RALLG-PEAETYEFVFT 141  Thermobifida...
jgi:Ccel_0732   83 eRWDIQFRHRGLALQQGHTYTVKFTVTAsr---acKIYPKIGDQGD----PYDEYWNmnqqwnFLELQaNTPKTVTQTFT 155 
Q59325          92 nRWRVQMRHRGLTLEQGHTYRVRLKIWAda---scKVYIKIGQMAE----PYAEYWNnk--wsPYTLTaGKVLEIDETFV 162  Hungateiclos...
3P6B_A          87 nKWSVQMRHRGITLEQGHTYTVRFTIWSdk---scRVYAKIGQMGE----PYTEYWNnn--wnPFNLTpGQKLTVEQNFT 157  Acetivibrio ...
Q60039         548 dTWHIQFNQW-IGLYKGKTYTISFRAKAdt---prPINVKILQNHD----PWINYFAq-----TVNLT-TEWQTFTFTYT 613  Thermotoga n...
Q59328        1220 aDYMPQIKQENIALQEGVTYTLSLKARAle---arSIKVDILDSSY----NWYGGT-------IFDLT-TEDAVYTFTFT 1284 Hungateiclos...
Q60039          81 hTWSVQIIQSPIRVEKLHKYRVFFKAKAsv---qrNIGVKIGGTAGrgwaAYNPGTDesg-gmVFELG-TDWKTYEFEFV 155  Thermotoga n...
Q59328         749 tDYGVQLLQAPIHLEKGAKYKASFDMKAen---prQVKLKIGGDGDr---GWKDYAAi----pPFTVS-TEMTNYEFEFT 817  Hungateiclos...
Q59328         919 sRGAIRLVQPGINIENGKTYKVSFEASAan---trTIEVEIASNLH----NSSIFAT------TFEIS-KESKIYEFEFT 984  Hungateiclos...
4XUO_A         127 YE--QGSSLLLYLEStd------aK 143  Paenibacillus barcinonensis
Q08166         142 SNv-DWDDAQVAFQIggs----deP 161  Thermobifida fusca
jgi:Ccel_0732  156 QTkgDKKNVEFAFHLap------dK 174 
Q59325         163 MDkpTDDTCEFTFHLgge---laaT 184  Hungateiclostridium thermocellum
3P6B_A         158 MNypTDDTCEFTFHLggel-aagtP 181  Acetivibrio thermocellus
Q60039         614 HPddADEVVQISFELgk-----eaP 633  Thermotoga neapolitana
Q59328        1285 QSk-SINNGVLTINLgtiegktsaA 1308 Hungateiclostridium thermocellum
Q60039         156 MRqeTDENARFEFQLgk------sT 174  Thermotoga neapolitana
Q59328         818 MKddTDVKARFEFNMgl------dD 836  Hungateiclostridium thermocellum
Q59328         985 MDkdSDKNGELRFNLgg------sN 1003 Hungateiclostridium thermocellum
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