4ZXE,4MO3,2W94,2VMC,5Y4M,2WUH,3JD6,1SDD,2L9L,2PQS,5JHK,5MSX,4OZO,3GGL,3HNM,4A45,2V72


Conserved Protein Domain Family
F5_F8_type_C

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pfam00754: F5_F8_type_C (this model, PSSM-Id:395611 is obsolete and has been replaced by 459925)
Click on image for an interactive view with Cn3D
F5/8 type C domain
This domain is also known as the discoidin (DS) domain family.
Statistics
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PSSM-Id: 395611
Aligned: 184 rows
Threshold Bit Score: 38.1966
Created: 22-May-2020
Updated: 7-Aug-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
4ZXE_B   14 TATASSIe-----GAGF----EASRAFD---GS--STT----RWA---SAEGVDP-----QWIYVNL-GSSQTVNRVKLN 66   Paenibacillus fukui...
Q833V2  989 QVKATSNlp---eQPGA----ELKKLTD---KD--LST----GWHtnwSTGIANPsdgnfLSLKFDL-GAEYQMDKIEYL 1051 Enterococcus faecalis
Q8XKW1  300 NIKSIKN------NGRHyaaqNIEKAID---ND--VNT----YWE---TGTLNSSsf--nNEVEVEF-NDLVTLDRIVYG 358  Clostridium perfrin...
Q8XKW1   75 NIKSITN------NGGKynssTIDKAID---GN--LET----HWE---TGKPNDSnf--tNEVVVTF-NEITNIDRIVYS 133  Clostridium perfrin...
Q8A3D9  234 SGTASSF------QSGS----NIEKSFD---GD--YSTlyhsSWS---NGASNYFp----ITLTYNF-ETVTDVDYLIYH 290  Bacteroides thetaio...
Q89ZX7  139 GGKASEHqegqdiENTY----DGKFSTD---G----AA----PFHt--PWGQSAKf---pVTLEYYF-KGDTEIDYLIYY 197  Bacteroides thetaio...
Q89ZU9  236 KVTGGYDtd---hQPGQ----DISKSYDgqfGgtcyHS----TWS---QSAKFP------VTLEYQFdQNQLTLDYILYH 295  Bacteroides thetaio...
Q8A5P4  178 EVSSEET------SGEGsdngHAIHAFD---GL--KGT----FWHt--QWKGNEPqp--pHHIVVDM-GQEVKMLGFQYV 237  Bacteroides thetaio...
Q9AJR8  848 TASSQEDe-----KGNTqvegPIGLAFD---GD--PST----FWHs--KWGDKNPp----FDVTVSF-HHDMVVNALTYL 906  Erysipelothrix rhus...
Q8VPE8 1329 GTNSEEPtk--glPGEG----PVALAFD---GD--PGT----HWHs--EWNGHAYpi--dAWWRTDA-APGQELCAVTYQ 1388 Trueperella pyogenes
4ZXE_B   67 WE------AAYASSYTIQVS--NDsGtptNW---TTVYTtttgDGGID-------DITFT--ARTAkYVRVHGTV---RG 123  Paenibacillus fukui...
Q833V2 1052 PRdn--agNGNILQLQYRTS--KD-Ga--NW---TEFSE----PINWKqd---alTKTIEtkDQAYrFVEMKVLK----- 1109 Enterococcus faecalis
Q8XKW1  359 SRqs--dlKGFAEEVYIYASrtSK-Gd--TY---KLVAT----GAHEAtkg--lvEAKFE--PTEFkRVKFKFKK----- 417  Clostridium perfrin...
Q8XKW1  134 ARrdsargKGFAKEFEIYASlkDE-Gd--DF----NLVS----SGEYTestrdlvEIKFN--PTDFkRLKFKFKK----- 195  Clostridium perfrin...
Q8A3D9  291 PRnn--gnNGRFKETEIQYS--AD-Gh--TF---TKLIDkd-fQGSATa-----gKVTFDq-TIQAkSFRFIVKSg--SG 351  Bacteroides thetaio...
Q89ZX7  198 TRs----gNGNFGKVKVYTT--TNpDr-sDY----TLQGeydfKEQNAp-----sKVSFSe-GIKAtGIKFEVLS----- 255  Bacteroides thetaio...
Q89ZU9  296 SRn----gNGNFGAFELYIK--PQ-Gs-tDF---IHIQDyd-fKGAGGs-----hRILLNd-PVVPaAVQFKVKS----- 352  Bacteroides thetaio...
Q8A5P4  238 SRdh---gEAWPQEMTMETS--LD-Gs--KWesaGTYSDl---PAGAKee----fRSYFPg-FKQArYFRLTITA---VY 298  Bacteroides thetaio...
Q9AJR8  907 PRqdg-tlNGVVTEYQILGK--LGdAp-------LHVLN----EGTLDtnl-tkkIITFEdaHVDTlIFKVVKGL----- 966  Erysipelothrix rhus...
Q8VPE8 1389 SRqt--gtNGHPSEAKIYTS--AD-Gq--DW---HEVAT----MKPNNskg--vqRFDLPa-GTTGpWVKFSITKatsTV 1451 Trueperella pyogenes
4ZXE_B  124 TPYGYSLWE-F 133  Paenibacillus fukuinensis
Q833V2 1110 SVGNFGSGReM 1120 Enterococcus faecalis
Q8XKW1  418 SKQNSATLNeL 428  Clostridium perfringens
Q8XKW1  196 ADQNWASSAeF 206  Clostridium perfringens
Q8A3D9  352 DGQGFASCAeM 362  Bacteroides thetaiotaomicron
Q89ZX7  256 GLGDFVSCDeM 266  Bacteroides thetaiotaomicron
Q89ZU9  353 GLNDFVSCDeM 363  Bacteroides thetaiotaomicron
Q8A5P4  299 SGKWATVVAeI 309  Bacteroides thetaiotaomicron
Q9AJR8  967 --ENYGNAAeI 975  Erysipelothrix rhusiopathiae
Q8VPE8 1452 AGKAFGSAAeF 1462 Trueperella pyogenes
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