Conserved Protein Domain Family
bHLH-O_DEC1

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cd19749: bHLH-O_DEC1 
basic helix-loop-helix-orange (bHLH-O) domain found in differentially expressed in chondrocytes protein 1 (DEC1) and similar proteins
DEC1, also termed Class E basic helix-loop-helix protein 40 (bHLHe40), or Class B basic helix-loop-helix protein 2 (bHLHb2), or enhancer-of-split and hairy-related protein 2 (SHARP-2), or stimulated by retinoic acid gene 13 protein (STRA13), is a bHLH-O transcriptional repressor involved in the regulation of the circadian rhythm by negatively regulating the activity of the clock genes and clock-controlled genes.
Statistics
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PSSM-Id: 381592
Aligned: 6 rows
Threshold Bit Score: 142.809
Created: 9-Aug-2018
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
putative dimerputative DNA
Feature 1:putative dimer interface [polypeptide binding site]
Evidence:
  • Comment:Based on the structure evidence that Homo sapiens HES-1 (2MH3) forms a homodimer.
  • Comment:HLH region of bHLH forms homo- and heterodimers

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                ## ### ## ##  ##  #       # ###  ## ## ### ##  #        
O14503        40 RRGIKRSEDSKETYKLPHRLIEKKRRDRINECIAQLKDLLPEHLKLTTLGHLEKAVVLELTLKHVKALTNLIDQQQQKII 119 human
NP_001264073  40 RRGLKRSEDSKDTYKLPHRLIEKKRRDRINECIAQLKDLLPEHLKLTTLGHLEKAVVLELTLKHVKALTALIEQQQQKIL 119 chicken
AAI29576      39 RKGVKRCEESKDTYKLPHRLIEKKRRDRINECIAQLKDLLPEHLKLTTLGHLEKAVVLELTLKHMRSLSSLIEQQQQQIL 118 African clawed ...
AAH66738      37 RRGMKRSEDSKDTYKLPHRLIEKKRRDRINECIAQLKDLLPEHLKLTTLGHLEKAVVLELTLKHVKALNNLLEQQQQKII 116 zebrafish
XP_007884433  71 KRGLKRNEDSKETYKLPHRLIEKKRRDRINECIAQLKDMLPEHLKLTTLGHLEKAVVLELTLKHVKALSSLIEQQQQKIL 150 elephant shark
XP_014352102  40 RRGSKRSEDSKETYKLPHRLIEKKRRDRINECIAQLKDLLPEHLKLTTLGHLEKAVVLELTLKHVRALTSLIEQQQQKII 119 coelacanth
Feature 1                  
O14503       120 ALQSGLQAGE 129 human
NP_001264073 120 ALQSGLQAGD 129 chicken
AAI29576     119 TLQSGSPSEE 128 African clawed frog
AAH66738     117 SLQNGLQIGE 126 zebrafish
XP_007884433 151 ALQNGIQIGE 160 elephant shark
XP_014352102 120 ALQNGLQVGE 129 coelacanth

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