2R3A,1PEG,6BOX


Conserved Protein Domain Family
SET_SUV39H

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cd10542: SET_SUV39H 
SET domain (including pre-SET and post-SET domains) found in suppressor of variegation 3-9 homologs, SUV39H1, SUV39H2 and similar proteins
This family includes SUV39H1 (also termed histone H3-K9 methyltransferase 1, H3-K9-HMTase 1, lysine N-methyltransferase 1A, KMT1A, position-effect variegation 3-9 homolog, SUV39H, or Su(var)3-9 homolog 1) and SUV39H2 (also termed histone H3-K9 methyltransferase 2, H3-K9-HMTase 2, lysine N-methyltransferase 1B, KMT1B, or Su(var)3-9 homolog 2), both act as histone-lysine N-methyltransferases that specifically trimethylate 'Lys-9' of histone H3 (H3K9me3) using monomethylated H3 'Lys-9' as substrate. They mainly function in heterochromatin regions, thereby playing central roles in the establishment of constitutive heterochromatin at pericentric and telomere regions. Also included are Schizosaccharomyces pombe H3K9 methyltransferase Clr4 (SUV39H homolog) and Neurospora crassa DIM-5, both of which also methylate 'Lys-9' of histone H3.
Statistics
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PSSM-Id: 380940
Aligned: 18 rows
Threshold Bit Score: 304.216
Created: 7-Jan-2010
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
Conserved site includes 31 residues -Click on image for an interactive view with Cn3D
Feature 1:putative active site [active site]
Evidence:
  • Comment:Based on the structure evidence that Homo sapiens EHMT1 (3HNA) binds SAH and mono-methylated H3k9 peptide.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                         
2R3A_A         44 SDFYYIn-EYKPAPgi----slVTFGCSCT----DCff--qKC-CPAeag-------------vlLAYNKNqqik----- 93   human
1PEG_B         25 PNFRFId-HSIIGKnvpvadqsFRVGCSCAsd-eECmy--sTCqCLDemapdsdeeadpytrkkrFAYYSQgakkgllrd 100  Neurospora cr...
XP_013394122  248 DNFIFId-DYKAGEgvii-pqdPIVGCECT----DCadekkKC-CPAnsg-------------asHPYHPSsgrlr---- 303  Lingula anatina
XP_019857051  456 VNFKYItsSIYSTNvpvp-nitALVGCSCL----NCse-svDC-CPQlag-------------qkAAYTKDkrmk----- 510  Amphimedon qu...
XP_019634119  258 PNFIYIn-DYKAGEgvvi-pedPLVGCSCS----DCfesqdAC-CPTqtg-------------akFAYTKTgrir----- 312  Belcher's lan...
P45975        388 SNFMYIhdNIIGKDvpk--peaGIVGCKCTedteECta-stKC-CARfag-------------elFAYERStrrlr---- 446  fruit fly
KXJ12518      240 EGFVYItkSIMPSNvdylfdknYLVGCECV----RCtp--lTCdCTKnsg-------------sdFAYDRIgrvl----- 295  Exaiptasia pa...
PVD24367      223 DNFVYIn-DYRAGEgiei-pqdPIIGCECK----NClderkSC-CAAacg-------------seFAYYKNkrlr----- 277  Pomacea canal...
KGG50746      104 PYFTYIneCFFGPGvpcp-dpsFLTGCDCVn---GChn-npDClCLHlnn-------------hsFPYDENgiln----- 160  Microsporidia...
EAL72127     1283 VNFKWId-KSFCDRetln-vkeFLSGCDCVg---DChn-npNCqCILeg---------------gIYYSDQgtltg---- 1337 Dictyostelium...
Feature 1                                                       ###                #      #  ## # 
2R3A_A         94 --ippgTPIYECNSRCQCg-pDCPNRi--vQKGTQYSLCIFRTsngRGWGVKTLVkIKRMSFVMEYVGEVITSEEAERRG 168  human
1PEG_B        101 rvlqsqEPIYECHQGCACs-kDCPNRv--vERGRTVPLQIFRTk-dRGWGVKCPVnIKRGQFVDRYLGEIITSEEADRRR 176  Neurospora cr...
XP_013394122  304 --vppgTPIYECNKRCACp-pECPNRv--vQHGRKFKVSIFRThngRGWGVKTKQkIKKGSFVMEYVGEVITNEEAEKRG 378  Lingula anatina
XP_019857051  511 --aargTPIYECNFMCSCs-sTCYNRv--vQFGRQFPVCIFRTrngRGWGVKTCSdLKRGTFVTEYVGEVITTEEAERRG 585  Amphimedon qu...
XP_019634119  313 --lrpgKPIYECNKRCSCg-pKCSNRv--iQKGRLHNMAIFRTangCGWGVKTLQkIKMNTFVMTYVGEVITNEEAEERG 387  Belcher's lan...
P45975        447 --lrpgSAIYECNSRCSCd-sSCSNRl--vQHGRQVPLVLFKTangSGWGVRAATaLRKGEFVCEYIGEIITSDEANERG 521  fruit fly
KXJ12518      296 --fepgKPIYECNSSCYCs-vSCRNRv--vQRGRTVRVTIFRTpngCGWGVKTMDpILKNQFVTEYVGEVLTSEEAEERG 370  Exaiptasia pa...
PVD24367      278 --vpqgTPVYECNKRCKCg-pECPNRv--vQNGRKFKVCIFRTsnaRGWGVKTLQrIKKGSFVMEYVGEVITNEEAERRG 352  Pomacea canal...
KGG50746      161 ---pnhGGIYECNLFCKCg-sDCLNRv--vQNGRKVSLDIVRFsdgRGWGVVSAQdIKKGTYISTYTGEIITNEEAEQRA 234  Microsporidia...
EAL72127     1338 --knieGPIVECNPRCKCsheLCKNRaiqqGQQNSFPLELFKTs-nKGWCARACIeIPKYTFVCEYVGEIISHDEAEERG 1414 Dictyostelium...
Feature 1                  ######  #                #          #####       # #             #      
2R3A_A        169 QFYDn--kGITYLFDLDYes-----------dEFTVDAARYGNVSHFVNHSCDPNLQVFNVFIDNld-trLPRIALFSTR 234  human
1PEG_B        177 AESTiarrKDVYLFALDKfsdpdsldpllagqPLEVDGEYMSGPTRFINHSCDPNMAIFARVGDHad-khIHDLALFAIK 255  Neurospora cr...
XP_013394122  379 RVYDa--eGRTYLFDLDYndg---------dcPYTVDAGFYGNVSHFVNHSCDPNLAVYGVWINTld-prLPRICLFAKR 446  Lingula anatina
XP_019857051  586 VTYDr--eGSTYLFDLDFded---------hpEFTIDAGHCGNISHFFNHSCSPNLQVFSVWINTld-trLPQLALFAKK 653  Amphimedon qu...
XP_019634119  388 KVYDe--nGRTYLFDLDYnde---------daPYTVDAAVHGNISHFVNHSCNPNMTVYNVFINCld-prLPHIALFSNK 455  Belcher's lan...
P45975        522 KAYDd--nGRTYLFDLDYnta--------qdsEYTIDAANYGNISHFINHSCDPNLAVFPCWIEHln-vaLPHLVFFTLR 590  fruit fly
KXJ12518      371 KLYDh--vGMTYLFDLDYndd---------yaAYTIDAKTYGNISHFINHSCDPNLNVYGVWIETld-pqMPQIAFFARR 438  Exaiptasia pa...
PVD24367      353 KIYDa--eGRTYLFDLDYndg---------dcPFTVDAGYYGNVSHFVNHSCEPNLVVYGVWINTld-prLPRICLFAAR 420  Pomacea canal...
KGG50746      235 KIYDa--nDRAYLFDLDFflcq------gaesEYTIDARQYGNISHFFNHSCDPNIRVYACLINHhd-erLHHNTFFACK 305  Microsporidia...
EAL72127     1415 LRYDt--qGLSYLYDLNGds-----------nCLVVDATHYGNATRFINHSCSPNLISIFFYLDQrieidKPRIAFFSSR 1481 Dictyostelium...
Feature 1                  # #                                                                    
2R3A_A        235 TINAGEELTFDYQMkgsg-------------------------------------------------------------- 252  human
1PEG_B        256 DIPKGTELTFDYVNgltglesda--------------------------------------------------------- 278  Neurospora cr...
XP_013394122  447 DIAKGEELTFDYMMtgdtsqqaqpscalptaddilettvteegs------------------------------------ 490  Lingula anatina
XP_019857051  654 DIVAGEELTFDYQMshnlagh----------------------------------------------------------- 674  Amphimedon qu...
XP_019634119  456 DIEAGEELTFDYLMykgdssdddtshpsspmtpf---------------------------------------------- 489  Belcher's lan...
P45975        591 PIKAGEELSFDYIRadnedvpy---------------------------------------------------------- 612  fruit fly
KXJ12518      439 DIKAGEELTFDYLMyteagsss---------------------------------------------------------- 460  Exaiptasia pa...
PVD24367      421 DINKGEELTFDYMMtgdttqsqqpmglflplcspvkdacnndisagiristtedesstandisdikerkntgekieewds 500  Pomacea canal...
KGG50746      306 DIKRGQELCFDYTGlsrdassnv--------------------------------------------------------- 328  Microsporidia...
EAL72127     1482 TIKEGEELTFDYRYnlpsgiqn---------------------------------------------------------- 1503 Dictyostelium...
Feature 1                                                                        #####         
2R3A_A        253 ------------------------------------------------------------rvrTVCKCGAVTCRGYL 269  human
1PEG_B        279 ------------------------------------------------------hdpskisemTKCLCGTAKCRGYL 301  Neurospora crassa
XP_013394122  491 ----------------------------------eiitmcaspgslypsegaedpvpatetfrMVCQCGAKNCRKYL 533  Lingula anatina
XP_019857051  675 ---------------------------------------------------------trgkgrVPCLCGSSKCRGFL 694  Amphimedon queen...
XP_019634119  490 --------------------------------------------vsrspikdqstegkkdkerVPCRCGAENCRKYL 522  Belcher's lancelet
P45975        613 -------------------------------------------------------enlstavrVECRCGRDNCRKVL 634  fruit fly
KXJ12518      461 -------------------------------------------------------kskskpkpVPCFCGAKNCRKYM 482  Exaiptasia pallida
PVD24367      501 lvqpvkpasptfarssmskicersspkkqpkmsdpataennsradgeekktdklqgqskmkyrMICQCGSAKCRKYL 577  Pomacea canalicu...
KGG50746      329 ------------------------------------------------------vikrpkefsLPCLCGSSQCRKFV 351  Microsporidia sp...
EAL72127     1504 --------------------------------------------------------ktnipggILCHCGSSKCRKWL 1524 Dictyostelium di...

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