3JCR,5GAN


Conserved Protein Domain Family
PRP3

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pfam08572: PRP3 (this model, PSSM-Id:369964 is obsolete and has been replaced by 462524)
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pre-mRNA processing factor 3 (PRP3)
Pre-mRNA processing factor 3 (PRP3) is a U4/U6-associated splicing factor. The human PRP3 has been implicated in autosomal retinitis pigmentosa.
Statistics
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PSSM-Id: 369964
Aligned: 133 rows
Threshold Bit Score: 90.7872
Created: 3-May-2019
Updated: 18-Jul-2019
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3JCR_K   309 TFF----D----------PRVSiAPSQRQRRTFKFHDKGKFEKIAQRLR--TKAQLEKLQAEIs---------QAARKT- 362 human
CCE62201  50 PYL----NfhdakgeanyKKVN----DRLHRGLVFHKKGEITAEYEKQR--LL--------NKkkkrkriygeKTQEKLe 111 Tetrapisispora phaf...
CCD26280  69 PYL----Stfntq-pstkTRKG----QRIQ---TFFQPGEVSKRIQHER--ELQRKVLEQERKfnelerqrrtKEDEVTk 134 Naumovozyma dairene...
CCC67369  75 PYL----Stlnkh-tgyeNKIH----KRYQRGLSFFQKGEISSKISDER--QVQREELERNRQfnerekirleKEDKKRr 143 Naumovozyma castell...
EJT44622  69 PYL----Sdiqg--pspsNKLN----RRYERGLKFYKKGEISKRIAQER--ELRKFQEDEDSKrrl----kleEEERERe 132 Saccharomyces kudri...
CCH61325  45 PYL----Qdsss--kfvdYKLQ----RRFDRGLKFFKKGEKLNEIAKKR--KIIHDSIEKNKLelqlqnelerKRLNDLr 112 Tetrapisispora blat...
Q6FJ58    42 PYL----Sdig----qqnGKVF----KKYKDGLRFYKKGEISAQLHKER--EELARRLKEEELraaaekahrvSLAEQKr 107 [Candida] glabrata
CAR24844  46 PYL----Srerf--dtvaSKVS----KRYSRGLKFRTPGVLAKELDEKR--Awlake-----------relqkEQDNLRk 102 Lachancea thermotol...
EGA75368  68 PYL----Sdphd--rgssSRFN----RRYERGLKFYQKGEISKRIAQER--TLQKQQEEEELKrkl----kqeEDEKDKr 131 Saccharomyces cerev...
5GAN_G    68 PYLsdphD----------RGSSsRFNRRYERGLKFYQKGEISKRIAQERtlQKQQEEEELKRKl---------KQEEDEk 128 Saccharomyces cerev...
3JCR_K   363 ---------GIHTSTRLAliapkkelkegDIP-EI--------EWWDSYIIPNGF------DlteENPkre--------- 409 human
CCE62201 112 keklnkikeGLIPNHVIGedkyf--taveDIPd-V--------EWWDRPYL---De-----NnniLEKydkqftvddvse 172 Tetrapisispora phaf...
CCD26280 135 lk----iqnCELPDLALGedkyi--pnvdDIPd-C--------EWWDVVYL---Dtt---dKtkiLDKysmqypsveede 193 Naumovozyma dairene...
CCC67369 144 ik----ierGELPDLELGedkyi--lkasSVPt-V--------EWWDLPFL---Ee----kSlqiLDKysmpypndedf- 200 Naumovozyma castell...
EJT44622 133 kl----vesGHLPDLKLHedtyi--ldlpKFEtYYnan--hghEWWDTVYL---De-----KgevMEKyrmkgtspaeed 196 Saccharomyces kudri...
CCH61325 113 tk----ienAELPDQTKNeekyl--ksieTIPk-V--------EWWDEPYLNETSns---dTltlVDKyrndysnlnedd 174 Tetrapisispora blat...
Q6FJ58   108 er----ianAEIPDDSIGeelym--qrfkDIPn-Y--------EWWDESYL---Dk-----SgniLPKytteypedmdsd 164 [Candida] glabrata
CAR24844 103 ak----vraGELPDESIGeqny----litDVPq-I--------EWWDAIYV---Qsp---eDwtiKTKysksygtmded- 158 Lachancea thermotol...
EGA75368 132 kl----iesGDLPNLELHedkfl--ldlsKFKiYYdnn--hgyEWWDTAYL---De-----KgelMGKydmngtspaeek 195 Saccharomyces cerev...
5GAN_G   129 dkrk-liesGDLPNLELHedkf----lldLSKfKIyydnnhgyEWWDTAYLDEKGelmekyDmngTSPaeeklaedid-- 201 Saccharomyces cerev...
3JCR_K   410 -------------------dyfGITNLVEHPAQLNPPVDNDtpv--tlG-VYLTKKEQKKLRRQTRREAQKELQEKVRLG 467 human
CCE62201 173 ses-----eveddernseivshPSIRYVQHPVPIKLGDrnr-----lvSkIYLTKTERKKLRRNRKKLEREEKETKIKLG 242 Tetrapisispora phaf...
CCD26280 194 d---------fvsdeedeeerhPSIRYIQHPVPIKM-ELSNqgg--rpNkVYLTKKEQKKIRRNKRKLIRQEIDEKIKLG 261 Naumovozyma dairene...
CCC67369 201 -----------isdegdveeihPSIRYIQHPVPIKV-Eevk-----ikDkIYLTKKEQKKVRRNTRKLIRQEKEEKIKLG 263 Naumovozyma castell...
EJT44622 197 gk------ydndddddddddkhPSIRYVAHPIPEKI-Nyak-----vsVkTYLTQRERKKIRRNRRKMFREAQEVKIKLG 264 Saccharomyces kudri...
CCH61325 175 -----------dsdeddedglhPSLRFIQHPVPIAAKAnstsessvviPkLYLTKLETKKLRRNNRKLIREEKESRIKSG 243 Tetrapisispora blat...
Q6FJ58   165 ydsddmnsgvecmksqteetgpPSIRYVQHPVPIKI-Peei-----taPkMYLTKLEHKKARRRNRKLQREEKMAKVQLG 238 [Candida] glabrata
CAR24844 159 -----------sddeqdsesesPSVRYVQHPVPVQAAEhap-----skPkIYLVKREQKKIRRNRRKLLQEEHEQKIKLG 222 Lachancea thermotol...
EGA75368 196 la------edidevddddddehPSIRYVAHPLPEKI-Neak-----vsIkAYLTQHERKRLRRNRRKMAREAREIKIKLG 263 Saccharomyces cerev...
5GAN_G   202 ------------evddddddehPSIRYVAHPLPEKI--NEAkvs--ikA--YLTQHERKRLRRNRRKMAREAREIKIKLG 263 Saccharomyces cerev...
3JCR_K   468 LMPPPEPKVRISNLMRVL-GTEAVQDPTKVEAHVRAQMAKRQKAHEEANAARKLT 521 human
CCE62201 243 ILPKPEPKVKVSNMMNVYeNNQNITDPTQWENTVREQVEERKRKHEETNKIRHEE 297 Tetrapisispora phaffii CBS 4417
CCD26280 262 LEPKPVPKVKLSNMMNVYeNNQNITDPTSWEVTVKQQMEERKRKHEEINQKRHEE 316 Naumovozyma dairenensis CBS 421
CCC67369 264 LEPKPLPKVKLSNMMNVFeNNQNITDPTTWETTVKQQVNARMRKHEEENNERHEl 318 Naumovozyma castellii CBS 4309
EJT44622 265 LLPKPEPKVKLSNMMSVYeNDQNIADPTAWEKTVKDQVDLRKRKHMEENERRHEE 319 Saccharomyces kudriavzevii IFO 1802
CCH61325 244 LDPKPDPKVKLSNMMAVFeNNQNITDPTAWENTVKTQINDRKQKHLQENEKRHLE 298 Tetrapisispora blattae CBS 6284
Q6FJ58   239 LEPKPETKVKLSNMMNVLdNNKNISDPTAWENMVKDQIEERRQRHIQENEKRHEE 293 [Candida] glabrata
CAR24844 223 LEPKPAPKVKLSNMMSVYqNNENITDPTSWEQTVKAQAEERHQKHVETNIRRHYE 277 Lachancea thermotolerans CBS 6340
EGA75368 264 LLPKPEPKVKLSNMMSVFeNDQNITDPTAWEKVVKDQVDLRKRKHLEENERRHED 318 Saccharomyces cerevisiae AWRI796
5GAN_G   264 LLPKPEPKVKLSNMMSVFeNDQNITDPTAWEKVVKDQVDLRKRKHLEENERRHEd 318 Saccharomyces cerevisiae S288C
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