2YRT,2XCM


Conserved Protein Domain Family
CHORD
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pfam04968: CHORD (this model, PSSM-Id:368213 is obsolete and has been replaced by 461502)
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CHORD
CHORD represents a Zn binding domain. Silencing of the C. elegans CHORD-containing gene results in semisterility and embryo lethality, suggesting an essential function of the wild-type gene in nematode development.
Links
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Statistics
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PSSM-Id: 368213
Aligned: 209 rows
Threshold Bit Score: 78.3326
Created: 6-May-2019
Updated: 18-Jul-2019
Structure
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Program:
Drawing:
Aligned Rows:
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Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
2YRT_A         10 LLCYNRGCGQ----RFDPETNSDD-ACTYHPGVPVFHDALKGWSCCKRRTTDFSDFLSIVGCTKGRH 71  human
40_pfamImport   1 TSCKNAGCVQvwygVMA-----IAvIVNLWNGCQRWHAEMKYWSCCKRKTSDFNTFLAQEGCTTGKH 62 
GAA27687      137 TSCKNSGCKA----TYSGTAADND-LCLYHPGVPIFHEGMKYWTCCNRKTSEFESFMEQIGCATGRH 198 Clonorchis sinensis
XP_018646240  152 TNCRNTSCKQ----VYTGTDSDNG-LCLYHPGVAVFHEGLKYWTCCNQKTSDFDAFLKQIGCTTGRH 213 Schistosoma mansoni
CDS30520      138 KSCRNSGCKA----VYHGIESDTE-TCLHHPGVPVFHEGCKYWSCCQRKTTEFEVFLTQPGCTSGRH 199 Hymenolepis microstoma
XP_002409601  152 TSCKNAGCQQ----SYQGEQSNLE-ICLYHSGFPIFHEGMKYWTCCQRKTSDFANFLEQRGCTSGSH 213 black-legged tick
XP_797726     192 TICKNKGCRM----PYEGEMSLTE-RCKHHPGAAIFHEGMKYWSCCNRKTSDFNNFLNQEGCTTGSH 253 purple sea urchin
XP_007248644  156 TVCKNRGCSK----KFSGPKSDEE-TCVHHSGVPIFHEGMKYWSCCQKKTSDFNSFLSQEGCSKGSH 217 Mexican tetra
XP_015782482  161 TSCKNNGCKK----SYEGPHSNQE-ECLFHPGTPIFHEGMKYWSCCRKKTSDFETFLSQEGCESSSH 222 two-spotted spider mite
XP_011442415  152 TSCKNNGCKA----CYQGEESDTE-KCLYHPGYPVFHEGMKFWSCCNRKTSEFDQFLAQEGCETGTH 213 Pacific oyster
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