1Z8L,1Z8L,2C6C,5ELY,4TWE


Conserved Protein Domain Family
M28_PSMA_like

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cd08022: M28_PSMA_like 
Click on image for an interactive view with Cn3D
M28 Zn-peptidase prostate-specific membrane antigen
Peptidase M28 family; prostate-specific membrane antigen (PSMA, also called glutamate carboxypeptidase II or GCP-II)-like subfamily. PSMA is a homodimeric type II transmembrane protein containing three distinct domains: protease-like, apical or protease-associated (PA) and helical domains. The protease-like domain is a large extracellular portion (ectodomain). PSMA is over-expressed predominantly in prostate cancer (PCa) as well as in the neovasculature of most solid tumors, but not in the vasculature of the normal tissues. PSMA is considered a biomarker for PCa and possibly for use as an imaging and therapeutic target. The extracellular domain of PSMA possesses two unique enzymatic functions: N-acetylated, alpha-linked acidic dipeptidase (NAALADase) which cleaves terminal glutamate from the neurodipeptide N-acetyl-aspartyl-glutamate (NAAG), and folate hydrolase (FOLH) which cleaves the terminal glutamates from gamma-linked polyglutamates (carboxypeptidase). A mutation in this gene may be associated with impaired intestinal absorption of dietary folates, resulting in low blood folate levels and consequent hyperhomocysteinemia. Expression of this protein in the brain may be involved in a number of pathological conditions associated with glutamate excitotoxicity. Inhibition of GCP-II has been shown to be effective in preclinical models of neurological disorders associated with excessive activation of glutamatergic systems. This gene likely arose from a duplication event of a nearby chromosomal region. Alternative splicing gives rise to multiple transcript variants.
Statistics
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PSSM-Id: 349942
Aligned: 40 rows
Threshold Bit Score: 291.441
Created: 26-Dec-2007
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
 
Conserved site includes 6 residues -Click on image for an interactive view with Cn3D
Feature 1: metal binding site [ion binding site], 6 residue positions
Conserved feature residue pattern:H [ED] [EKQ] E [ED] [QNRH]Click to see conserved feature residue pattern help
Evidence:
  • Structure:1Z8L: Human prostate-specific membrane antigen (PSMA) binds two Zn(II) ions.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                        
1Z8L_A         3 MKAFLDELKAe-NIKKFLYNFTQIPHLAGTeqNFQLAKQIQSQWKEFglDSVELAHYDVllsypnkthpnyisiinedgn 81   human
NP_197475     32 ELFISTSFSDnaSVALNLHTLTRRPHVAGTvaNAEAAEYVRSVFTSSa-LKSHVVAYQVsltypvhrslvltptdsakpi 110  thale cress
XP_962547    235 RQYLESNISSn-QIKDNLQHFTSYSHLAGTegDYALMEDIELLFRKYglEDVSRDTYHVylnypkadgraveiiddkadn 313  Neurospora cra...
EAT84632     209 RGTALSSVEGw-RIEKHLEYITSYDHVGGTegSYVLGQWIEGKFKDAhmDTYTHDEYWAymnyakpdgrkvaivdppekr 287  Phaeosphaeria ...
XP_001223531 266 RNHVQGSIDAr-KIRDHLRHFTGYAHVAGTagDFALMEDTEMLFRKYglEDVRRDVYHVylnypkdggravevlgkggkv 344  Chaetomium glo...
EDN05149     201 RIYVQSHINEs-YIAENLEMITKFPHVAGTegNYVLAQWVEDKFRSAymDDVAMEQFDVylnypkdggrrvaivdppela 279  Ajellomyces ca...
EFQ32443     234 RMYIQNNVEDr-RMKASVAHYTKYAHMAGTegDYALAMDVESMFTRAglDYVNIDEYYVylnypkaggraveilgddgka 312  Glomerella gra...
NP_567007     65 RRLFLSSASNa-TISSYLRELTRHPHLAGTkpSLDTLHYVFNHFQSLg-LETHVAEYEAllsypthisvtasfsntttle 142  thale cress
NP_509928     74 IATNIKQLINvdNIRSNLHSLTKKPHVAGTenNLRVAEMIRDQMITQglENVHFNEYNVmlsypnwttpniieilkenrd 153  Caenorhabditis...
NP_001024866  46 AGVIQDNIKTe-NIKKYLRIFTKDPHVAGTeaNKKVAYEIANAWSEAglEDVHTLPYEVllsypdfenpnsviikssagk 124  Caenorhabditis...
Feature 1                                                                                        
1Z8L_A        82 eifntslfeppppgyenvsdivppfsafspqgmpegdlvyvnyartedffklerdmkincsgkiviarygkvfrgnkvkn 161  human
NP_197475    111 tflleqeklgdnpyanevmptfhgyaksgnvsgpvvyanygrvedfvrlkkdmgvnvsgavviarygqiyrgdivknaye 190  thale cress
XP_962547    314 gkgkaiwsakleendrasgltghqtwafhghsktgdvrgrliyanygsredfqrikdlgiqtagaialvryygphadral 393  Neurospora cra...
EAT84632     288 weakleepavfnppkaqtpayhgmsasgnvtgpliyvnycdkkdfkrlwdsgidvqgaialcrtygpqpdlamkvkaaqn 367  Phaeosphaeria ...
XP_001223531 345 twsakwegegvggvrrptpafhghsksgdvkgrliyahyglredfqllkdrginlngaivlvrhygpqhdialkvkaaee 424  Chaetomium glo...
EDN05149     280 weakldeeqsykgpprkqypvfhghsksgnvtgpliyanygspedfkaladmgvklegsivlvryygtqgdralkvkaae 359  Ajellomyces ca...
EFQ32443     313 kwaakleeeevggeaaghqtfvfhghsksadvngpliyvnygsrsdfkkladsgidtkgaialvryygsqespalkvkaa 392  Glomerella gra...
NP_567007    143 fdlndvpgdspvvrpyhayspsgsaqgnvvfvnhgeerdyhalesigvsvkgcvvlarkgenlgrgaivkiaeakgalgv 222  thale cress
NP_509928    154 lvfsttgrsvsvikeeqndplaeiqwlaysaagtvegdivyvnnanpsdieyleslgidlkdkiflaryssnyrgniaqm 233  Caenorhabditis...
NP_001024866 125 evfkskgvspviipdeqsgkyaghqwlayagngsasadvvyinhgtandfknlklmgvdikgkialmryghgfrgdkihk 204  Caenorhabditis...
Feature 1                                                                                        
1Z8L_A       162 aqlagakgvilysdpady-----fapgvksypdgwnlpgggvqrgnilnlngagdpltpgypaneyayrrgiaeavglps 236  human
NP_197475    191 agavgvviy-----------------------tdkrdyggdewfpaskwmppsgvqvgtvynglgdpttpgwasvdgcer 247  thale cress
XP_962547    394 kvkaaelagfagcliysdpfddgfkkgdtapkgpfmpadgvqrgsvslmswvvgdvltpgwgsrenmprmkkeqtkglvk 473  Neurospora cra...
EAT84632     368 agcvgvlvysdpaddgfk------kgnpwpdgkwrpgesvqrgsvaqtniimgdvttpgkasvkkvervsqqdnpalpki 441  Phaeosphaeria ...
XP_001223531 425 agavgcitysdpaddgs--------lkgtavsgdrslpidgvqngtvsllswvvgdvltpgwgskdnlprmkldqtkglv 496  Chaetomium glo...
EDN05149     360 lagaagciiysdpaqdgf------llgpewpngrympsdgvqrggvsmiswvvgdvlspgfasspgekkrislddspalp 433  Ajellomyces ca...
EFQ32443     393 eeagfagcivysdpaddg------frlgdvapngrfmpadgvqrgsvalsnwvlgdpltpgweskknlprmkpeetkglv 466  Glomerella gra...
NP_567007    223 liyae--------------------------------ndgggfggiergtvmrgigdpvspgwpgvvggeklslddelvt 270  thale cress
NP_509928    234 avkkgakaclvysdpkqva----slgtgpnetygntdkmpsntvqmgsvyiglgdprtpafpsigdlfkekteqdlldek 309  Caenorhabditis...
NP_001024866 205 aqqagaigailfsdtqdvaq--dgvesenvypkkiwmpnegvqrgslmhgdgdalspyypskkelfkgrtieeakedgvl 282  Caenorhabditis...
Feature 1                                                                                        
1Z8L_A       237 ipvhpigyydaqkllekmggsappdsswrgslkvpynvgpgftgnfstqkvkmhihstnevtRIYNVIGTLRGavEPDRY 316  human
NP_197475    248 lsdeavelsgdvplipslpvsaadaevilktvvgdvsdgdvypvgpgpgvlnlsyigetviaKIENVIGVIEGeeEPDRY 327  thale cress
XP_962547    474 ipslplswrdakvllqhlkgkgqrvpedwvggvpdvdewwtgdhenspivrlkneqdenekqAIWNVYGSILGieQEEKK 553  Neurospora cra...
EAT84632     442 pslplswkdaqkllqslkdsgeklpsewrggvpdvgdewfsghpdtapkvnlqnfpdeapqqLVTNIFGTFRGmeDGARK 521  Phaeosphaeria ...
XP_001223531 497 kipslpltwrdaqallqrlkgsgqrvpeqwigdvpdvsewwtgdssspivrlknvqdevekqPIWNVYGRITGieQGEKK 576  Chaetomium glo...
EDN05149     434 kipsipiawrdaqpllkalqghgkkvpkdwvggvpeirewwsgdpsspkvnlvntqdeverqPIFNVIGKIIGieQNEKK 513  Ajellomyces ca...
EFQ32443     467 kipslplswrdaqvllqhlkghgeqvpkewaggvpdvgewwtgnlsspivrlkndndvvqekGIWNVYGKIEGieQDQKS 546  Glomerella gra...
NP_567007    271 rrfpkipslplslrnaeiilaslggaraplewrnsgrvgpgqrvgpgrmvinmtfqgemkmkKINNVVVTIRGseEADRY 350  thale cress
NP_509928    310 kiptipmlpityataqilfenmkgdavnadfqgklnvtyrygpglinnqklrvtvhaeneerKIQNIMGYIKGsqEPDKF 389  Caenorhabditis...
NP_001024866 283 psipvlpvsyttgyeilkrlsgrpapsdwqgfvggnltyklgpgfvngeklsinvhselrtkRIRNVIGYIRGseEPDSY 362  Caenorhabditis...
Feature 1             #         #                                     ##                         
1Z8L_A       317 VILGGHRDSWVFGGIDPQSGAAVVHEIVRSFGTLKKE-GWRPRRTILFASWDAEEFGLLGSTEWAEENSrLLQErGVAYI 395  human
NP_197475    328 VILGNHRDAWTFGAVDPNSGTAVLMEIAQRLDKLQKR-GWKPRRTIILCNWDAEEYGLIGSTEWVEENReMLSSrAVAYL 406  thale cress
XP_962547    554 VIIGNHRDAWTLGAADPHSGTAIMLELARVFGELLRM-GWRPLRTIQFMSWDAEEYNLIGSTEFVEQNDdMLRKdALAYI 632  Neurospora cra...
EAT84632     522 IIVGNHRDSWCFGAADPGSGTAVMLEVARVLGELRAQ-GWRPLRTIEFASWDAGEYNKIGSTEHVEANVdALREnAIAYL 600  Phaeosphaeria ...
XP_001223531 577 VIIGNHRDSWAFPAVGPHSGTAIMLEVVRILGDLVGR-GWRPLRTIEFASWDAQEYNLIGSTEYVEQNDeALRRdALAYI 655  Chaetomium glo...
EDN05149     514 IIVGSHRDAWCFGAADPGSGTAVLLEVARVFGLLRSH-GWRPLRTIEFASWDGGEYNLIGSTEHVEKEAdELRRnGFAYL 592  Ajellomyces ca...
EFQ32443     547 IIIGNHRDAWSFGATEPHSGTAIMIEMARIFGSLVAK-GWRPLRSIEFMSWDAAEYNMIGSTEFVERNEdLLRQnAFAYI 625  Glomerella gra...
NP_567007    351 VILGNHRDAWTYGAVDPNSGTSALLDISRRFALLLKS-GWRPRRTILLCSWDAEEFGMIGSTEWIEENVlNLGAsAVAYL 429  thale cress
NP_509928    390 VLVSNHYDAWTYGAVDPNSGTSTLLEVSRALKQYQNQtGWIPARSILFAHWDAEEYGLIGSTEFAEEYRlQLMRrAVAVI 469  Caenorhabditis...
NP_001024866 363 IMLGNHFDAWVYGSIDPNSGTAVLAEVARAMMQTINEtSWKPARTIVFNAWDAEEFGLIGSTEFVEEFVnILQKrAVVYI 442  Caenorhabditis...
Feature 1          #                                                                             
1Z8L_A       396 NADSSIEgnYTLRVDCTPLMYSLVHNLTKELKSPDegfegkslyesw---tkkspspefsgmPRISKLGS---GNDFEVF 469  human
NP_197475    407 NVDCAVSg-PGFHASATPQLDELIKVAAQEVRDPDnatqtiye-----------swigssdsVVIRRLGGg--GSDYASF 472  thale cress
XP_962547    633 NLDTAVTg-NTLHVAGSPVFKGLLMQILDIVRDPYenatlke-------------lwerrnaNDLEGLGA---GSDYVAF 695  Neurospora cra...
EAT84632     601 NVDAGITg-EQLWAKGSPIFQHAWGRVIDRLSDPRenktlke--------------lwetksSEIGNLGA---GSDTAPF 662  Phaeosphaeria ...
XP_001223531 656 NLDKAVSg-DTFHAAGSPVFRKLLLQILNRVADPHfnstlre--------------rwdrrkGEIEGLGT---DSDYVPF 717  Chaetomium glo...
EDN05149     593 NVNVAVSg-NKFRAAASPVFERVLLRILKRTADPVthqtlrs--------------lwdqrgSKLEVLGA---GSDYVAF 654  Ajellomyces ca...
EFQ32443     626 NLDSAVAg-TEFHAAGSPVFRQTVYRVIDRVFDANlnatlrg--------------lwdqhgSDLEDLGM---GGDYVPF 687  Glomerella gra...
NP_567007    430 NVDCAVQg-SGFFAGATPQLDGLLVDVLKLVQDPDavgltve-------------etfksqnNIIQRLSRv--DSDFSGF 493  thale cress
NP_509928    470 NMDLIGGn-QTLLGLSNPTVANVLRSAAANVEQPNptemeqgrktlydswkyyapsknnrstHPYQRIPAg--GSDHLPF 546  Caenorhabditis...
NP_001024866 443 NMDCIQGn-ISLHVDTVPILEHAVIEASKQVENPSkrersrgrktly----dtwmkvfpdkkAGVPKIRVpggGSDHAPF 517  Caenorhabditis...
Feature 1                                    #                                           
1Z8L_A       470 FqRLGIASGRARYTKnwetnkfsgYPLYHSVYETYELVEKFy-DPMFKYHLTVAQVRGGMVFELANSIVLPF 540  human
NP_197475    473 VqHVGVPGVDMSFGRg--------YPVYHSMYDDFTWMEKFg-DPMFQRHVAMASVLGLVALRLADEEIIPF 535  thale cress
XP_962547    696 QdIVGTSSIDLHFDGk--------GHPCHSSYDTFEWMEQVg-DPDFVHHTMLGQVVALLLYELTDRPVLPF 758  Neurospora crassa OR74A
EAT84632     663 QyISGTSSIEFGFSStpsn-spssNPLSGSCYETYSWMAKYi-DPGWSYHTLLAQIWVLLILEIAQDPIMPL 732  Phaeosphaeria nodorum ...
XP_001223531 718 QsIAGTSSLDIHFGGd--------KSSHRSIHQNFHWMDNVg-DPGFIYHDLLGQVLGLLILELSNRPILPF 780  Chaetomium globosum CB...
EDN05149     655 QdIAGMSSIDFGFTGd--------PYPYNSCYDNFDWMSQVg-DPGFQYHKVLGQIWALLLLELSDNPIFPF 717  Ajellomyces capsulatus...
EFQ32443     688 QnIVGTSALDVGFRGa--------RFPAQSSYDNYEWVNRIg-DPDFAYHVMMGQVVGLLILELADRPILPF 750  Glomerella graminicola...
NP_567007    494 LhHAGIPSIDMYYGAd--------YPVYHTAFDSYDWMIHNa-DPLFHRHVAMAGIWGLLGILLADEPLIPF 556  thale cress
NP_509928    547 FdYLGIPIVFFITSSlda---pptYPLYHTIYETPYLIENIm-DPGYKVHKAIAGMFIECILKFTESKILPY 614  Caenorhabditis elegans
NP_001024866 518 LnFAGVPVINFTFKNytt---wdtYPLYHTMYETPFSNIHLldTDNLSVHKAIGQYWAELAKTFADDVILPM 586  Caenorhabditis elegans

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