1CX8,1Z8L,1Z8L,1DE4


Conserved Protein Domain Family
M28_PMSA_TfR_like

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cd03874: M28_PMSA_TfR_like 
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M28 Zn-peptidase Transferrin Receptor-like family
Peptidase M28 family; Transferrin Receptor (TfR) and prostate-specific membrane antigen (PSMA, also called glutamate carboxypeptidase or GCP-II) subfamily. TfR and PSMA are homodimeric type II transmembrane proteins containing three distinct domains: protease-like, apical or protease-associated (PA) and helical domains. The protease-like domain is a large extracellular portion (ectodomain). In TfR, it contains a binding site for the transferrin molecule and has 28% identity to membrane glutamate carboxypeptidase II (mGCP-II or PSMA). The PA domain is inserted between the first and second strands of the central beta sheet in the protease-like domain. TfR1 is widely expressed, and is a key player in the uptake of iron-loaded transferrin (Tf) into cells. The TfR1 homodimer binds two molecules of Tf and the complex is then internalized. TfR1 may also participate in cell growth and proliferation. TfR2 binds Tf but with a significantly lower affinity than TfR1. It is expressed chiefly in hepatocytes, hematopoietic cells, and duodenal crypt cells; its expression overlaps with that of hereditary hemochromatosis protein (HFE). TfR2 is involved in iron homeostasis; in humans, mutations in TfR2 are associated with a form of hemochromatosis (HFE3). PSMA is over-expressed predominantly in prostate cancer (PCa) as well as in the neovasculature of most solid tumors, but not in the vasculature of normal tissues. PSMA is considered a biomarker for PCa and possibly for use as an imaging and therapeutic target. The extracellular domain of PSMA possesses two unique enzymatic functions: N-acetylated, alpha-linked acidic dipeptidase (NAALADase) which cleaves terminal glutamate from the neurodipeptide N-acetyl-aspartyl-glutamate (NAAG), and folate hydrolase (FOLH) which cleaves the terminal glutamates from gamma-linked polyglutamates (carboxypeptidase). A mutation in this gene may be associated with impaired intestinal absorption of dietary folates, resulting in low blood folate levels and consequent hyperhomocysteinemia. Expression of this protein in the brain may be involved in a number of pathological conditions associated with glutamate excitotoxicity. This gene likely arose from a duplication event of a nearby chromosomal region. Alternative splicing gives rise to multiple transcript variants. While related in sequence to peptidase M28 GCP-II, TfR lacks the metal ion coordination centers and protease activity.
Statistics
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PSSM-Id: 349871
Aligned: 21 rows
Threshold Bit Score: 234.884
Created: 3-Jun-2005
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
 
putative metaldimer interface
Conserved site includes 6 residues -Click on image for an interactive view with Cn3D
Feature 1: putative metal binding site [ion binding site], 6 residue positions
Conserved feature residue pattern:[HNRQ] [KNED] E [EDRHQ] [HD] [HNDE]Click to see conserved feature residue pattern help
Evidence:
  • Structure:1Z8L: Human prostate-specific membrane antigen (PSMA) binds two Zn(II) ions.
  • Comment:TfR lacks the canonical metal ion coordination centers

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                         
1CX8_A          6 LKRKLSEKld---------------stDFTSTIKLLNens-yvPREAGsq----kDENLALYVENEFREfklsKVWRDQH 65   human
1Z8L_A          3 MKAFLDELka----------------eNIKKFLYNFTq----iPHLAGte----qNFQLAKQIQSQWKEfgldSVELAHY 58   human
1Z8L_D          3 MKAFLDELka----------------eNIKKFLYNFTq----iPHLAGte----qNFQLAKQIQSQWKEfgldSVELAHY 58   human
1DE4_C          7 LKRKLSEKld---------------stDFTSTIKLLNens-yvPREAGsq----kDENLALYVENQFREfklsKVWRDQH 66   human
P47161        135 YLNSLQQEn------------------RAKEHVYKYA------GYMSNga----sDSSTFKYTLDEFLDmg-yKPKVEKY 185  baker's yeast
NP_985015     100 FAKVTKDEayrlfvt------sllwenYAKGHMRHIAs----kNHPAG-------DSRALKYTMRELRAyg-lNPVCETY 161  Ashbya gossyp...
XP_449372      89 LARDLRRFhsarm----------tqseVYRIFLDTLLyenkaeQHHDAi-----sKTNGTSYIKNYLIDlg-fEIKNDSY 152  Candida glabr...
XP_451735      99 YVETLMKEn------------------KCQDHLSNYTs----hIHWAG-------DAHALEYTINELSMlg-fTPKLEEY 148  Kluyveromyces...
XP_001526974  188 LTKSDVKRnflrmtgigkihdhvsneeHLDHWLQNFTe----iNSKAKynmihynNPELLSYVESSFKKfg-fHTEQHFY 262  Lodderomyces ...
XP_001646786  109 FINKLDEVn------------------LIKTHIGKLSd----gSKRPG-------DQSELTYVTEQLEKlg-fNPKLEKY 158  Vanderwaltozy...
Feature 1                                                                                         
1CX8_A         66 Fvkiqvkdsaqnsviivdkngrlvylvenpggyvayskaatvtgklvhanfgtkkdfedlytpvngsivivragkitfae 145  human
1Z8L_A         59 Dvllsypnkthpnyisiinedgneifntslfeppppgyenvsdivppfsafspqgmpegdlvyvnyartedffklerdmk 138  human
1Z8L_D         59 Dvllsypnkthpnyisiinedgneifntslfeppppgyenvsdivppfsafspqgmpegdlvyvnyartedffklerdmk 138  human
1DE4_C         67 Fvkiqvkdsaqnsviivdkngrlvylvenpggyvayskaatvtgklvhanfgtkkdfedlytpvngsivivragkitfae 146  human
P47161        186 Ypwigepvdtnvaplengkvvyeasmiedrvkgdpasharkrqkgfhqyskngsvtaryvfcnygsisdyklllkknidi 265  baker's yeast
NP_985015     162 Ypyfntpirtevsiwtngleaeklstwedvldqsqstnisvagfhgysadgdvtaayvycgygsaeeyfyllqngiqlag 241  Ashbya gossyp...
XP_449372     153 Yawvntpvkqqvrviqddeviyqaklkedltgvshnafhgyskdgkltarfvycnyctiedytklvndkidiegkvhick 232  Candida glabr...
XP_451735     149 Htwlnepvktevtlwdqnhllynasmtedyisegedndsfkkvfgfhgfsangtvrseyvycnygtiedyehllshnvkl 228  Kluyveromyces...
XP_001526974  263 Dinvpnpkaasvslkdshnlvlyrcdilepgfktpafyawgaagnvsapyvyvnhgslkdyvrllnqsitlkgkififqn 342  Lodderomyces ...
XP_001646786  159 Ypwmstpndtklqlyyndnikynfgliedcledydqltcidnklkgfhtysangevkssyvfvnygtlqdykllldnnis 238  Vanderwaltozy...
Feature 1                                                                                         
1CX8_A        146 kvanaeslnaigvliymdqt------------------------------------------kfpivnaelsffghahlg 183  human
1Z8L_A        139 incsgkiviarygkvfrgnkvknaqlagakgvilysdpadyfapgvksypdgwnlpgggvqrgnilnlngagdpltpgyp 218  human
1Z8L_D        139 incsgkiviarygkvfrgnkvknaqlagakgvilysdpadyfapgvksypdgwnlpgggvqrgnilnlngagdpltpgyp 218  human
1DE4_C        147 kvanaeslnaigvliymdqt------------------------------------------kfpivnaelsffghahlg 184  human
P47161        266 edkihivrsgkilpglkvknaelygassviiytdpfddg---kvteengflhypygparnpsyirrdsvnyfsdtpgdpt 342  baker's yeast
NP_985015     242 kvhivregrlhpgqkiryaeaygavgvitysdscddgn-----vttvhgyapypfgpaahpsrlrrdsvlfsneipgdpt 316  Ashbya gossyp...
XP_449372     233 yginapgnklknaelygstgvliftdineipnmpv------------nygtinssetnsyddaiqrdtvrfgsdifgdpt 300  Candida glabr...
XP_451735     229 egkihvirygaimkgivvknaetfgalgailytdsfddg---litenngykpypegparhessiergsvllvdsvagdpt 305  Kluyveromyces...
XP_001526974  343 viggpsnitieekfalaeyygavgvlt----------------------------ytdfsrsefidsstnkidyaisrga 394  Lodderomyces ...
XP_001646786  239 vegkihiirngditqgfqlknaelygaigvvtfsdpvddg--fvtnengfasypygkarhlssinrgsvayladipgdpt 316  Vanderwaltozy...
Feature 1                                                                                         
1CX8_A        184 tgdpytpgfpsfnhtqfppsrssglpnipvqtisraaaeklfgnmegdcpsdwktdstcrmvtsesknvkltvsnvlkei 263  human
1Z8L_A        219 aneyayrrgiaeavglpsipvhpigyydaqkllekmggsappdsswrgslkvpynvgpgftgnfstqkvkmhihstnevt 298  human
1Z8L_D        219 aneyayrrgiaeavglpsipvhpigyydaqkllekmggsappdsswrgslkvpynvgpgftgnfstqkvkmhihstnevt 298  human
1DE4_C        185 tgdpytpgfpsfnhtqfppsrssglpnipvqtisraaaeklfgnmegdcpsdwktdstcrmvtsesknvkltvsnvlkei 264  human
P47161        343 tpgypskdsdtehmspvgrvpripsvpmsardvqpilerlngrgfqigpgsnikdfgsftgpsssidkvhlhneltynik 422  baker's yeast
NP_985015     317 tpgsvpwsprtrrqlmnarvpripsvpisereaskllkllngkgvrvglggntkgfdyhsgpsdsnvqvrvlnrqnygmh 396  Ashbya gossyp...
XP_449372     301 tpgyaalypdtermnpndympsipslpisyrdasklldmlhakgsfwvsndgvnsaklfsgpsdpntevqlvnrqeygvq 380  Candida glabr...
XP_451735     306 tpeysskhkdvkrlnsssnlptipsvpmsereiapllkllngngiqwetkgnvkgfqyfsgpsdagvscrivneqkyltk 385  Kluyveromyces...
XP_001526974  395 ssriikiptipiskalvqpiltrgkakpniefadweffpefdpehnlqlqmememqnqsyyigdgeetdastneqgstpq 474  Lodderomyces ...
XP_001646786  317 spnfpsknrdterlspagkiptipslplsseevsnllaelngigykfqeggdvigfdyssgpspenvtlllsnsqnynit 396  Vanderwaltozy...
Feature 1                                #             #                                     ##   
1CX8_A        264 KILNIFGVIKGfvEPDHYVVVGAQRDAWg----pGAAKSGVGTALLLKLAQMFSDMVLKdGFQPsRSIIFASWSAGDFGS 339  human
1Z8L_A        299 RIYNVIGTLRGavEPDRYVILGGHRDSWv----fGGIDPQSGAAVVHEIVRSFGTLKKE-GWRPrRTILFASWDAEEFGL 373  human
1Z8L_D        299 RIYNVIGTLRGavEPDRYVILGGHRDSWv----fGGIDPQSGAAVVHEIVRSFGTLKKE-GWRPrRTILFASWDAEEFGL 373  human
1DE4_C        265 KILNIFGVIKGfvEPDHYVVVGAQRDAWg----pGAAKSGVGTALLLKLAQMFSDMVLKdGFQPsRSIIFASWSAGDFGS 340  human
P47161        423 EMSSVEVSIPGi-FTEGEIIIGAHRDSLas---sSAGDANSGSAILLEIARGMSKLLKH-GWKPlRPIKLISWDGERSGL 497  baker's yeast
NP_985015     397 AITNVIAEVPGi-LKDQEVVIGANRDSWa----vGAGESASATSILLEIARGLGAARKK-GWKPlRSIKLISWDGEELGL 470  Ashbya gossyp...
XP_449372     381 QIDNIIVEIPGi-LSENDILIGAHRDGFpigngtSSMSSHSGIAVLLEFARGISKLRKK-GWKPlRTIKFVLWDGLHNSQ 458  Candida glabr...
XP_451735     386 EITNVVIEIPGi-LKEQEVIIGNHRDSWts---gGAGGPNSGSSILLEIARGFSALHQK-GWKPlRTIKLISWDGGEQGM 460  Kluyveromyces...
XP_001526974  475 KLGIVVGTLKGi-INDADIIIGARRDSL------TSENPLSGHAIMLEIMRNFQKLVKQ-GWKPlRNIKFISWDASHLDL 546  Lodderomyces ...
XP_001646786  397 EITNIVIDIKGi-FSEGMIILGSHRDHWtv---gGVGKSSSNTALFLEIARGMSYLISK-GWKPlRPIKLVNWDGSEEGF 471  Vanderwaltozy...
Feature 1                                  #                                                      
1CX8_A        340 VGATEWLEGYLs-SLHLkAFTYINLDKAVLgtSNFKVSASPLLYTLIEKTMQNVKhpvtgqfl----------------- 401  human
1Z8L_A        374 LGSTEWAEENSr-LLQErGVAYINADSSIEgnYTLRVDCTPLMYSLVHNLTKELKspdegfegkslyes----------- 441  human
1Z8L_D        374 LGSTEWAEENSr-LLQErGVAYINADSSIEgnYTLRVDCTPLMYSLVHNLTKELKspdegfegkslyes----------- 441  human
1DE4_C        341 VGATEWLEGYLs-SLHLkAFTYINLDKAVLgtSNFKVSASPLLYTLIEKTMQNVKhpvtgqfl----------------- 402  human
P47161        498 LGSTDYAEAHAa-ILRRrALVYLNLDNAISg-TNFHCKANPLLQDVIYEAAKLTEfnghedwslf--------------- 560  baker's yeast
NP_985015     471 LGSTSHGAAHNt-SISDkTIAYFNLGNPVTg-TDFECEAHPLVAGHLLDASKATNfkekfsd------------------ 530  Ashbya gossyp...
XP_449372     459 LGSSSFGTRYAt-SLKRdSLLYVNLDNAIAg-QYFNVKANPMLISAITEASKNIDykknedwslf--------------- 521  Candida glabr...
XP_451735     461 LGSTEYGEYHRe-SLSKgTVAYFNLDLGVIg-SKLNIKANPLLNELIVRSSKRTLfkedpevtly--------------- 523  Kluyveromyces...
XP_001526974  547 VGLKSYIDDSKafNLKRpVLSYINIDGDVImgSHFLIDANPLFNHILRKTSKYIPiprnltrsntgcverdisviyseml 626  Lodderomyces ...
XP_001646786  472 LGSTEYGEDHAa-FFRTnAISYINMDNIMSg-TKFSCLSNPLLKEVIIKASRSTSfkglddwtly--------------- 534  Vanderwaltozy...
Feature 1                                                                                         
1CX8_A        402 --------------------------------------------------yqdsnwasKVEKLTl---------DNAAFP 422  human
1Z8L_A        442 --------------------------------------------wtkkspspefsgmpRISKLGs---------GNDFEV 468  human
1Z8L_D        442 --------------------------------------------wtkkspspefsgmpRISKLGs---------GNDFEV 468  human
1DE4_C        403 --------------------------------------------------yqdsnwasKVEKLTl---------DNAAFP 423  human
P47161        561 -------------------------------------------------dhwkytsnaTISLLDg---------LSSYTS 582  baker's yeast
NP_985015     531 ---------------------------------------------------tlydywrNQSNLSias----pvsSSSYAT 555  Ashbya gossyp...
XP_449372     522 -------------------------------------------------qewyntsnaKVDSLEg---------VNDYSV 543  Candida glabr...
XP_451735     524 -------------------------------------------------dywkessnaTIDILGa---------GTDFAV 545  Kluyveromyces...
XP_001526974  627 nyehnneyngryslgdefralfaaddgndnvndndgdgdgdddddfnddfttlhhlwkKQDQLHinnnlgwpvsSSEFGF 706  Lodderomyces ...
XP_001646786  535 ------------------------------------------------dewkrqspstEVDYPGg---------DSDTMI 557  Vanderwaltozy...
Feature 1                                      #                                          
1CX8_A        423 FLaYSGIPAVSFCFCEdt------dYPYLGTTMDTYKELIEri-peLNKVARAAAEVAGQFVIKLTHDVELN 487  human
1Z8L_A        469 FFqRLGIASGRARYTKnwetnkfsgYPLYHSVYETYELVEKfy-dpMFKYHLTVAQVRGGMVFELANSIVLP 539  human
1Z8L_D        469 FFqRLGIASGRARYTKnwetnkfsgYPLYHSVYETYELVEKfy-dpMFKYHLTVAQVRGGMVFELANSIVLP 539  human
1DE4_C        424 FLaYSGIPAVSFCFCEdt------dYPYLGTTMDTYKELIEri-peLNKVARAAAEVAGQFVIKLTHDVELN 488  human
P47161        583 FQyHLGVPAAHFQFNAndt---sgaVYHSNSVFDSPTWLEKft-nsDYKLHNTMAMFVGLTTLMLSENELAR 650  baker's yeast
NP_985015     556 FQhHLGVPSAECRFVNnrk---ddaIHHGHSSYDTYTWMEKll-dpDYELHNTLAMFVGLSALMLAENELVP 623  Ashbya gossypii ATCC ...
XP_449372     544 FQfYLGIPVVNFSFNSrts---nqpQFPINTGYDNKEWLIRyv-dpEFLLHNTLSRFLGMFVLMVSETELSY 611  Candida glabrata CBS 138
XP_451735     546 FQnNLGIPSIDFSFDRdpk---kdaVHQFHSSYDSFEWMKTfv-dpDFSLHSTMAMFVGVSTLSLTENELLG 613  Kluyveromyces lactis ...
XP_001526974  707 FQqHLAAPVINVKFANdekr--dggIYVPNSNFYSRKWLIEqssdrRLHLHGALVKYVGLLAISLSEHEVAD 776  Lodderomyces elongisp...
XP_001646786  558 FQnHLGIPSMECSFINdrl---hdaVYQPGSNFDTEKWMETfl-dpRYELHSTLATFFGLVVLNLSEKVVIP 625  Vanderwaltozyma polys...

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