Conserved Protein Domain Family
LGIC_ECD_nAChR_proto_alpha-like

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cd19031: LGIC_ECD_nAChR_proto_alpha-like 
extracellular domain of nicotinic acetylcholine receptor subunit alpha-like found in protostomia
This subfamily contains the extracellular domain of nicotinic acetylcholine receptor subunit alpha-like in organisms that include arthropods, mollusks, annelid worms, and flat worms, and have their cholinergic system limited to the central nervous system. C. elegans genome encodes 29 acetylcholine receptor subunits, of which the levamisole-sensitive receptor (L-AChR) alpha-subunits, UNC-38, UNC-63, and LEV-8, included in this subfamily, form heteromers with the two non-alpha (also known as beta-like) subunits, UNC-29 and LEV-1. This receptor functions as the main excitatory postsynaptic receptor at neuromuscular junctions, indicating that many are expressed in neurons. Also included is the nicotinic alpha subunit MARA1 (Manduca ACh Receptor Alpha 1) which is expressed in Ca2+ responding neurons and contributes to the nicotinic responses in the neurons. In insects, the receptors supply fast synaptic excitatory transmission and represent a major target for several insecticides. In Drosophila, ten exclusively neuronal nAChRs have been identified, Dalpha1-Dalpha7 and Dbeta1-Dbeta3, and various combinations of these subunits and mutations are key to nAChR function. Alpha5 subunit is involved in alpha-bungarotoxin sensitivity while the alpha6 subunit is essential for the insecticidal effect of spinosad. nAChR agonists acetylcholine, nicotine, and neonicotinoids stimulate dopamine release in Drosophila larval ventral nerve cord and mutations in nAChR subunits affect how insecticides stimulate dopamine release.
Statistics
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PSSM-Id: 349832
Aligned: 24 rows
Threshold Bit Score: 357.362
Created: 17-Oct-2017
Updated: 10-Sep-2024
Structure
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Aligned Rows:
 
pentamerCys-loop
Feature 1:pentamer interface [polypeptide binding site]
Evidence:
  • Comment:based on homology to other members of nicotinic acetylcholine receptor family

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                              # #     ##      #                     #
P91766     24 DAKRLYDDLLSNYNklvrp-----vlnvsDALTVRIKLKLSQLIDVNLkNQIMTTNLWVEQSWYDYKLSWEPreYGGVEM 98  tobacco hornworm
ELT96524    9 DAKRLYENLLRDNNynklir---pvgndsDKLTVKLGLRLSQLIDVDEkNQIMTTNVWLTQEWTDYKLLWNPqeYGGVDR 85  Capitella teleta
PAA86923   26 DAKRLYDDLLVKTDynklir---pvnnnsKTLTVYLGLKLSQLIDVDEkNQIMTTNVWLREVWYDSKLTWDPakYHGVST 102 Macrostomum lignano
OWF41618   23 DAKRLYHDLLVERHynklir---pvsnssDKLVVKMGIRLSQLIDVDEkNQIMTTNVWLRQEWYDYKLSWQKaeYGGVDR 99  Yesso scallop
Q9N587     26 DANRLFEDLIADYNklvrp-----vsengETLVVTFKLKLSQLLDVHEkNQIMTTNVWLQHSWMDYKLRWDPveYGGVEV 100 Caenorhabditis ele...
ASK12220   25 SAKRLHHDLMSHYNalvkp-----sggpnHQLTVKMGLRLSQVLDVDEkNQIITISVWLRQEWDDLRLKWDPsdHGGVHK 99  Conus betulinus
ELT99602   27 DAKRLYDDLLLKSGynklnr---pvlnytEAVKVKFGLKLSALNDVDEkNEIMTTTMWLMIKWFDHGLKWNKedYGGVER 103 Capitella teleta
ESO02874   27 YAKKLYDQLIRKKGyskvir---pvyntsDKVIVEISLKLSQLIDLDErNQIMTTNVWVTQTWFDPALVWKPkeFGNVDM 103 Helobdella robusta
ESO00646   28 KAKKLYSKLFESRDgsrynkyirpveresDVIDVYIGLKLSQLIDVDEkNQYMTTNVWMLYEWVDPTLKWDPanYDGVLS 107 Helobdella robusta
Q23022     26 DAKRLYDDLMVNYNrhrrp-----stspnKPLTIKLKLRLSQIIDVHEiDQIMTCSVWLKQTWIDRKLSWDPvnYGGVNV 100 Caenorhabditis ele...
Feature 1      #        ## # ##   # ##   ### #         # # #   #                     #        
P91766     99 LHVPSDhIWRPDIVLYNNaDGNFEVtlATKATLNYTGRVEWRPPAIYKSSCEIDVEYFPFDQQTCVMKFGSWTYDG--FQ 176 tobacco hornworm
ELT96524   86 LYVPSEeIWLPDIVLYNNaDGNYEVtlMTKATLYPNGRVHWEPPAIYKSSCTMDVEFFPFDKQLCTLKFGSWTYDG--FQ 163 Capitella teleta
PAA86923  103 LYIPSEhIWLPDIVLYNNaDGNYEVtlMTKASLKSTGKILWEPPAIYKSSCQIDVEFFPFDSQECTMKFGSWTYDG--LQ 180 Macrostomum lignano
OWF41618  100 LYVPSKqIWLPDIVLYNNaDGHYEVtlMTKATLHPNGKVVWEPPAIYKSSCQIDVEFFPFDIQQCSMKFGSWTYDG--DQ 177 Yesso scallop
Q9N587    101 LYVPSDtIWLPDVVLYNNaDGNYQVtiMTKAKLTYNGTVEWAPPAIYKSMCQIDVEFFPFDRQQCEMKFGSWTYGG--LE 178 Caenorhabditis ele...
ASK12220  100 LNIPSDdLWKPDIVLYNNaDGDFVVtlKTKATVYHTGKIVWEPPAIYKSYCPIDVEFFPFDMQECFMKFSSWTYNG--FE 177 Conus betulinus
ELT99602  104 IYVPSTaIWLPDVVLYNNaDGDYHItiMTKATLTYTGEVEWRPPAIYKSQCDIDVEYFPFDIQICRMIFLPWSHDG--TK 181 Capitella teleta
ESO02874  104 IYVPANsIWVPDIVLYNTaDGVYEMtsGTKAVVMNTGKIKWKPPASFRSSCLIDVTYFPFDEQMCGFQFGSWTYNI--QE 181 Helobdella robusta
ESO00646  108 LYVPAVsIWHPDIILYNTaDGTYEPtnGTNAILWFNGTIMWSPPASFKVGCTLDVTYFPFDQQDCGFQFASWTYNR--HE 185 Helobdella robusta
Q23022    101 LYVPYEmIWVPDIVLYNNaDSNYNItiSTKATLHYTGEVTWEPPAIFKSMCQIDVRWFPFDEQQCHLKFGSWTFSEnlLS 180 Caenorhabditis ele...
Feature 1                                                                                     
P91766    177 VDLRHIDEVrgtn-----------------vvelGVDLSEFYTSVEWDILEVPAVRNEKfyt--ccdEPYLDITFNITMR 237 tobacco hornworm
ELT96524  164 VDLQHIWQDnrgsek-------------leaieeGIDLKDFYRSVEWDLMSAKAKKNEKyyt--ccsEPYPDITFNVTMR 228 Capitella teleta
PAA86923  181 VDLRHIQQAntsqw----------------evnyGIDLETFYESTEWDVMRVPARRNEKtyp--ccpEPYPDITFTIVLR 242 Macrostomum lignano
OWF41618  178 VDIIHMCSDeamdr---------------kliaeGIDLRDFYPSVEWDILEGTARKNVRhyp--ccpEPYPDITFNITMR 240 Yesso scallop
Q9N587    179 VDLQHRDKHlekeieedvegvdgptkeivwvvdrGIDLSDYYPSVEWDILNVPGKRHSKryp--cceSPFIDITYEIHLR 256 Caenorhabditis ele...
ASK12220  178 VDLQHVCNGttvdds--------------viiprGIDMKDYYYNVEWDVLNVTARRNVKfyp--cceEPFPDITFMITLR 241 Conus betulinus
ELT99602  182 VDMSHVKRDlyardpcnn--------tenpliekGIDMDEFIPSQEWDVLQVPAKRRINfyp--ccsYPYPDIIFDITLR 251 Capitella teleta
ESO02874  182 VDIQHAWQPdds-------------------idmGIDLSEFYRSAEWDLMSAPATKRNRsya--gseEPFPEWTFNVTLK 240 Helobdella robusta
ESO00646  186 VGVWRVLVChdsqdy-------------ddyvqdGIDLSEFYQNVEWDLMAIPAQKTLIhya--gsrEEFTMWTFNMQLR 250 Helobdella robusta
Q23022    181 VELNEPSLRyeeeidekgi------idnvtvaedGIDLSDYYPSVEWDIMSRVAKRRAKnypsccpqSAYIDVTYYLQLR 254 Caenorhabditis ele...
Feature 1      #   
P91766    238 RKTLF 242 tobacco hornworm
ELT96524  229 RKTLF 233 Capitella teleta
PAA86923  243 RKTLF 247 Macrostomum lignano
OWF41618  241 RKTLF 245 Yesso scallop
Q9N587    257 RKTLF 261 Caenorhabditis elegans
ASK12220  242 RRTLF 246 Conus betulinus
ELT99602  252 RKTLF 256 Capitella teleta
ESO02874  241 RKFLF 245 Helobdella robusta
ESO00646  251 RKFLF 255 Helobdella robusta
Q23022    255 RKPLF 259 Caenorhabditis elegans

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