Conserved Protein Domain Family
BTB_POZ_KCNS2

?
cd18427: BTB_POZ_KCNS2 
BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in potassium voltage-gated channel subfamily S member 2 (KCNS2)
KCNS2, also called delayed-rectifier K(+) channel alpha subunit 2 or voltage-gated potassium channel subunit Kv9.2, is a modulatory alpha subunit of voltage-gated potassium channel that can form functional heterotetrameric channels with KCNB1 (also known as Kv2.1) and KCNB2 (also known as Kv2.2), and further modulates the delayed rectifier voltage-gated potassium channel activation and deactivation rates of KCNB1 and KCNB2. Voltage-gated potassium (Kv) channels are composed of alpha subunits, which form the actual conductance pore, and cytoplasmic beta subunits, which are auxiliary proteins that associate with alpha subunits to modulate the activity of the Kv channel. KCNS2 is a regulatory alpha subunit that cannot form a functional homo-tetrameric channel. It forms hetero-tetrameric channels (with other functional alpha subunits) through its BTB/POZ domain, also known as tetramerization (T1) domain, which is a versatile protein-protein interaction motif.
Statistics
?
PSSM-Id: 349734
Aligned: 7 rows
Threshold Bit Score: 224.341
Created: 12-Sep-2017
Updated: 2-Oct-2020
Structure
?
Aligned Rows:
 
Feature 1:putative tetramer interface [polypeptide binding site]
Evidence:
  • Comment:based on the tetramer structures of Rattus norvegicus voltage-gated potassium channels Kv1.2 and Kv4.3

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
Feature 1            # ########  #                                   # ##  #  #   #  #  # #      
Q9ULS6        18 EIRINVGGFKRRLRSHTLLRFPETRLGRLLlCHSREAILELCDDYDDVQREFYFDRNPELFPYVLHFYHTGKLHVMaELC 97  human
XP_006001087  18 EISINVGGFKKKLKSNTLSRFPETRLGRLLsCQSKESILELCDDYDDTENEFYFDRNPKLFPYVLNFYNTGKLHVMeELC 97  coelacanth
XP_020793316  20 AIRINVGGFKKRLQSDTLSRFPETRLARLLqCRSKESILELCDDYDDTEKEFYFDRNPALFPYVLNFYNTGRLHVMaELC 99  great blue-spot...
XP_021244780  18 EISINVGGFKKKMRSNTLLRFPETRLGKLLsCHSKESILELCDDYDDTKNEFYFDRNPELFPYVLHFYNTGKLHVMgELC 97  helmeted guinea...
XP_018414709  18 EISINVGGFKKRLRYETLLKFPETRLCKLLaCQSKESILELCDDYDDTKNEFYFDRNPELFPYVLHFYNTGKLHVMgELC 97  Nanorana parkeri
XP_007893329  38 EISVNVGGLKRKLGRHLLARYPETRLARLLsCRSTKSVLDLCDDYDASKREFYFDRNPALFPYVLNFYHTGRLHVMgELC 117 elephant shark
OCT74903      18 EISINVGGYKKRLRYDTLLRFPETRLCKLLaCRSKESILELCDDYDDTKNEFYFDRNPELFPYVLHFYNTGKLHVMgELC 97  African clawed ...
Feature 1         ##  #                     
Q9ULS6        98 VFSFSQEIEYWGINEFFIDSCCSYSYH 124 human
XP_006001087  98 VFSFCQEIEYWGINELFIDSCCSYIYH 124 coelacanth
XP_020793316 100 IFSFSQEIEYWGINEFFIDSCCSSAYH 126 great blue-spotted mudskipper
XP_021244780  98 VFSFSQEIEYWGINEFFIDSCCSYSYH 124 helmeted guineafowl
XP_018414709  98 VFSFCQEIEYWGINEFFIDSCCSYSYH 124 Nanorana parkeri
XP_007893329 118 VFSFSQEIEYWGINDLFIDSCCGSAYR 144 elephant shark
OCT74903      98 VFSFCQEIEYWGINEFFIDSCCSYSYH 124 African clawed frog

| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap