Conserved Protein Domain Family
BTB_POZ_KCNG1_2

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cd18421: BTB_POZ_KCNG1_2 
BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in potassium voltage-gated channel subfamily G members, KCNG1 and KCNG2
KCNG1, also called voltage-gated potassium channel subunit Kv6.1 or kH2, functions as a regulatory alpha-subunit of voltage-gated potassium channel that can form functional heterotetrameric channels with KCNB1 (also known as Kv2.1), and further modulates the delayed rectifier voltage-gated potassium channel activation and deactivation rates of KCNB1. KCNG2, also called cardiac potassium channel subunit or voltage-gated potassium channel subunit Kv6.2, is a new gamma-subunit of voltage-gated potassium channels that can form functional heterodimeric channels with KCNB1, and further modulates channel activity by shifting the threshold and the half-maximal activation to more negative values. Voltage-gated potassium (Kv) channels are composed of alpha subunits, which form the actual conductance pore, and cytoplasmic beta subunits, which are auxiliary proteins that associate with alpha subunits to modulate the activity of the Kv channel. KCNG1 and KCNG2 are regulatory alpha subunits and do not form homomultimers. They form heteromultimers (with other alpha subunits) through its BTB/POZ domain, also known as tetramerization (T1) domain, which is a versatile protein-protein interaction motif.
Statistics
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PSSM-Id: 349728
Aligned: 12 rows
Threshold Bit Score: 227.328
Created: 12-Sep-2017
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
putative
Feature 1:putative tetramer interface [polypeptide binding site]
Evidence:
  • Comment:based on the tetramer structures of Rattus norvegicus voltage-gated potassium channels Kv1.2 and Kv4.3

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                # ########  #                                   # ##  #  #   #  #  # #  
24418479      60 DRRRRIIINVGGIKYSLPWTTLDEFPLTRLGQLKACTNFDDILNVCDDYDVTCNEFFFDRNPGAFGTILTFLRAGKLRLL 139 human
NP_001103880  67 AQRLHVIINVGGLRYQFPWTTLEDFPLSRLGQLRLCSTFDEIMHICDDYDVVHNEFFFDRSPCAFRTILTFLRAGKLRSL 146 zebrafish
NP_001096675  59 DRKHHAIINVGGFRYLLPWTTLEEFPLTRLGQLKLCSNFDEILSICDDYDVTCNEFFFDRNPGAFRTILTFLQVGKLRLL 138 tropical clawed...
XP_015152002  60 DRKHHIIINVGGIKYLLPWTTLDEFPLTRLGQLKFCNNFDDILNICDDYDVTCNEFFFDRNPGAFRTILTFLRVGKLRLL 139 chicken
XP_007910133  59 DRKHHVIINVGGIKYVLPWTTLDGFPLTRLGQLRSCHNFDEIMKICDDYDVTCNEFFFDRNPGAFRTILTFLRAGKLRLL 138 elephant shark
O73606        54 DRTRFVIINVGGIKYKVPWTTLENCPLTRLGKLKSCNNYDEIMNICDDYDVSCNEFFFDRNPSAFRTIMTFLTAGKLRLL 133 chicken
XP_017950308  58 DRTRHVIINVGGIKYRIPWTTLENCPLTRLGKLKTCNNYDEIMDVCDDYDINCNEFFFDRNPCAFRTIMTFLAAGKLRIL 137 tropical clawed...
XP_690900     67 LFDRTAIINVGGIRYRIPWSTLEEFPLTRLGRLHNCNNAEEILDLCDDYDARCNEFFFDRSPSAFRSIVTFLAAGKLRLL 146 zebrafish
XP_006002426  60 DRKHHVIINVGGIKYFLPWTTLEDFPLTRLGQLKFCNNFEDIMSICDDYDVTCNEFFFDRSPRAFRTILTFLQVGKLRLL 139 coelacanth
XP_006010993  58 DRTRYVIINVGGIKYKIPWTSLDDFPLTRLGKLRSCNNYDEIMNICDDYDVSCNEFFFDRNPCAFRTIMTFLIAGKLRLL 137 coelacanth
XP_007898773  53 DRTRYVIINVGGIKYKIPWTTLDEFPLTRLGKLKSCNNYDEIMDICDDYDVNGNEFFFDRNPCAFRTIMTFLTVGKLRLL 132 elephant shark
OCT76545      58 DRTRHVIINVGGIKYRIPWTTLENCPLTRLGKLKTCNNYDEILDVCDDYDINCNEFFFDRNPCAFRTIMTFLAAGKLRIL 137 African clawed ...
Feature 1             ##  #                        
24418479     140 REMCALSFQEELLYWGIAEDHLDGCCKRRYLQKI 173 human
NP_001103880 147 REMCALSFQEELLYWGVPEESLEWCCRRRLLQRV 180 zebrafish
NP_001096675 139 REMCALSFQEELLYWGIEEDNLEWCCKRRYIQKM 172 tropical clawed frog
XP_015152002 140 REMCALSFQEELLYWGIEEDNLDWCCKRRYLQKM 173 chicken
XP_007910133 139 REMCALSFQEELLYWGIEDDNLERCCRRRYLQKI 172 elephant shark
O73606       134 REMCALSFQEELVYWGIEEDHLEWCCKKRLQQKE 167 chicken
XP_017950308 138 REMCALSFQEELIYWGIEEEQLEWCCLRKLQQKE 171 tropical clawed frog
XP_690900    147 REMCALSFQEELSYWGVEEASLEWCCLRKLRLRQ 180 zebrafish
XP_006002426 140 REMCALSFQEELVYWGIEDNSFEWCCRRKYLQKI 173 coelacanth
XP_006010993 138 REMCALSFQEELLYWGIEEENLEWCCLRRLQQME 171 coelacanth
XP_007898773 133 REMCALSFREELVYWGIEDENLEWCCRRRMYQKE 166 elephant shark
OCT76545     138 REMCALSFQEELIYWGIEEEQLEWCCLRKLKQKE 171 African clawed frog

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