5BXH


Conserved Protein Domain Family
BTB_POZ_KCTD9

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cd18368: BTB_POZ_KCTD9 
Click on image for an interactive view with Cn3D
BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in potassium channel tetramerization domain-containing protein 9 (KCTD9)
KCTD9 is a BTB/POZ domain-containing protein that contributes to liver injury through NK cell activation during hepatitis B virus-induced acute-on-chronic liver failure. It functions as a substrate-specific adaptor of a BCR (BTB-CUL3-RBX1) E3 ubiquitin-protein ligase complex, which mediates the ubiquitination of target proteins, leading to their degradation by the proteasome. The BTB/POZ domain, also known as tetramerization (T1) domain, is a versatile protein-protein interaction motif that facilitates homodimerization or heterodimerization. KCTD family BTB domains can adopt a wide range of oligomerization geometries, including homodimerization, tetramerization, and pentamerization. The KCTD9 BTB domain forms a pentameric structure.
Statistics
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PSSM-Id: 349677
Aligned: 21 rows
Threshold Bit Score: 166.668
Created: 12-Sep-2017
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
pentamer
Conserved site includes 29 residues -Click on image for an interactive view with Cn3D
Feature 1:pentamer interface [polypeptide binding site]
Evidence:
  • Structure:5BXH: Interface between one monomer and adjacent monomers in Homo sapiens KCTD9 pentamer, contacts at 4A.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1          #     ########  #                                                              
5BXH_A          4 DWLTLNVGGRYFTTTRSTLVNkePDSMLAHMFkdkgv------------------------------------------- 40   human
XP_001750348  696 QWIKLNVGGRIFQTTLETLTRw-EDSMLATMFlsdhw------------------------------------------- 731  Monosiga brev...
KYQ92473       16 DWIKLNVGGRIIHTTMTTLSKe-PESMLNAMFkkgst------------------------------------------- 51   Dictyostelium...
OTF75418      134 EWIKLNIGGRIFTTTRSTIVAkePESMLAKMFetfhhfissttkqrqkkainddnnddcdskkeddtlkivnndcderkq 213  Euroglyphus m...
PAA77984       21 DWVKLNVGGKLFLTTRSTLTQkePDSMLAKMLttydgda----------------------------------------- 59   Macrostomum l...
XP_014151392   78 DWIAFNVGGQVFVTTKTTIQRg-ESTMLSRLIeedmw------------------------------------------- 113  Sphaeroforma ...
KYQ90538       93 EWITINVGGKIFTTTRTTILSrdKDSMLAKMFsenw-------------------------------------------- 128  Dictyostelium...
XP_019859141  126 DWVRLNVGGKVFATSRATITSd-PSSMLARMFesdw-------------------------------------------- 160  Amphimedon qu...
XP_012565550  100 GWIKLNVGGRCFTTTRNTLTKy-HGTMLERMFsnqeh------------------------------------------- 135  Hydra vulgaris
XP_002125967   95 EWITLNVGGKLFTTTRTTLVTrdPESMLAKMFqypdr------------------------------------------- 131  vase tunicate
Feature 1                                           # ### ## #   #  ## # ### ###  #  #            
5BXH_A         41 -----------------------wgnkqDHRGAFLIDRSPEYFEPILNYLRHGQLIVNdGINLLGVLEEARFFGIDSLIE 97   human
XP_001750348  732 ------------------------estmDDNGCHLLDRNPRYFEPLLGFMRDGVLTLDpGLSRRGVLAEAHFFGLWAAID 787  Monosiga brev...
KYQ92473       52 -----------------------wnhsrDENGCILVDADPRYFLVLLNYLRHGELILEpNLNYYGVLALAKYFQIKSITD 108  Dictyostelium...
OTF75418      214 sekiikttkttipilsdnnntcivpsliDEQGAYMIDRSPEYFEPLLSYLRHGNLIIDkHLNPMGVLEEAKFYGFYSLLP 293  Euroglyphus m...
PAA77984       60 ---------------------rrwhnrtDTDGAILVDRSPEYFEPLLNYLRHGRLILDrHVSPLGVLAEAQFYGIQGVMD 118  Macrostomum l...
XP_014151392  114 ------------------------qstrDRNGTVMLDRSPKYFEPLLNFLRHGEMVLGeGLNPRGVLAEARFFGMNDACK 169  Sphaeroforma ...
KYQ90538      129 ------------------------dssrDVNGAYLIDRSPEYFEPILNYLRCGTIVVNdFVNVEGVYQEARFFNITGMIE 184  Dictyostelium...
XP_019859141  161 ------------------------fsatDDSGAYLIDRSPEYFEPLLNFMRHGKLIINeGVNPQGVLEEAKFFNVTKAIQ 216  Amphimedon qu...
XP_012565550  136 -----------------------whsaiDSNGCYLIDRSPDFFEPILNYMRNGVLIINdGINPKGVLEEAKFFGIKPIIE 192  Hydra vulgaris
XP_002125967  132 -----------------------wsnttDKNGAYLFDRSPEYFEPLLDFLRHGKLILNpNINPQGILEEATFYGLTSAAE 188  vase tunicate
Feature 1               
5BXH_A         98 HLEVAI 103  human
XP_001750348  788 ILEPLA 793  Monosiga brevicollis MX1
KYQ92473      109 IIEQEE 114  Dictyostelium lacteum
OTF75418      294 ELEATV 299  Euroglyphus maynei
PAA77984      119 ELNQLV 124  Macrostomum lignano
XP_014151392  170 ILEQMC 175  Sphaeroforma arctica JP610
KYQ90538      185 KLSQMV 190  Dictyostelium lacteum
XP_019859141  217 PLETLV 222  Amphimedon queenslandica
XP_012565550  193 ELESSV 198  Hydra vulgaris
XP_002125967  189 EAEKLL 194  vase tunicate

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