Conserved Protein Domain Family
MFS_SLC18A1_2_VAT1_2

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cd17384: MFS_SLC18A1_2_VAT1_2 
Vesicular amine transporters 1 (VAT1) and 2 (VAT2), and similar transporters of the Major Facilitator Superfamily
Vesicular amine transporter 1 (VAT1 or VMAT1) is also called solute carrier family 18 member 1 (SLC18A1) or chromaffin granule amine transporter, while VAT2 (or VMAT2) is also called SLC18A2, synaptic vesicular amine transporter, or monoamine transporter. VATs (or VMATs) are responsible for the uptake of cytosolic monoamines into synaptic vesicles in monoaminergic neurons. VAT1 and VAT2 distinct pharmacological properties and tissue distributions. VAT1 is preferentially expressed in neuroendocrine cells and endocrine cells, where it transports biogenic monoamines, such as serotonin, from the cytoplasm into the secretory vesicles. VAT2 is primarily expressed in the CNS and is involved in the ATP-dependent vesicular transport of biogenic amine neurotransmitters including dopamine, norepinephrine, serotonin, and histamine into synaptic vesicles. VATs belong to the bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.
Statistics
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PSSM-Id: 340942
Aligned: 35 rows
Threshold Bit Score: 464.738
Created: 3-Feb-2017
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
putative
Feature 1:putative chemical substrate binding pocket [chemical binding site]
Evidence:
  • Comment:based on the structures of MFS transporters with bound substrates, substrate analogs, and/or inhibitors
  • Comment:since MFS proteins facilitate the transport of many different substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides, the residues involved in substrate binding may not be strictly conserved among superfamily members
  • Comment:the substrate binding site or translocation pore has access to both sides of the membrane in an alternating fashion through a conformational change of the MFS transporter

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                   ##  ##  #                                                            
Q05940        22 ILFIVFLALLLDNMLLTVVVPIIPSYLysikheknateiqtarpvhtasisdsfqsifsyydnstm-------------- 87  human
XP_014249122  13 VLTIVYYSLLLDNVLLTVVVPIVPDYLitveaes---------------------------------------------- 46  bed bug
KFB36380      16 VAFVVYISLFLDNMLLTVIVPILPDYLvqfhtnvpasviyknfslhyvpkli---------------------------- 67  Anopheles sinensis
XP_016663067  14 VISVVYLSMFLDNVLLTVVVPIIPEHLyiqwitnttnfvtnvtir----------------------------------- 58  pea aphid
KOC71028      11 VVAVVYLSLFLDNVLLTVVVPIIPDYLctldgns---------------------------------------------- 44  Habropoda labor...
XP_018909911  16 IVFIVYVSLFLDNTLLTVVVPIIPDYLfhienpysdvltnisrttt---------------------------------- 61  Bemisia tabaci
XP_002423547  19 TIGVVYLSLLLDNVLLTMVVPIMPDFLiknsidgnkpennqeyrmissy------------------------------- 67  human body louse
ERL91619      13 VFVIVYMMFLLDNILLTVVVPIIPDYLfahilnysaplespany------------------------------------ 56  mountain pine b...
XP_015784778  33 VVILIYCSFLVDNILLTMVVPIIPDYLerinaksykiafnnltgelngtltqsskepststssslpsastatsttpttts 112 two-spotted spi...
ELT91656      22 GLSVVFLALFLDNLLLTVVVPIIPEFLyaierdklsaelqqdldllaeeagalawlnat--------------------- 80  Capitella teleta
Feature 1                                                                                        
Q05940           --------------------------------------------------------------------------------     human
XP_014249122     --------------------------------------------------------------------------------     bed bug
KFB36380         --------------------------------------------------------------------------------     Anopheles sinensis
XP_016663067     --------------------------------------------------------------------------------     pea aphid
KOC71028         --------------------------------------------------------------------------------     Habropoda labor...
XP_018909911     --------------------------------------------------------------------------------     Bemisia tabaci
XP_002423547     --------------------------------------------------------------------------------     human body louse
ERL91619         --------------------------------------------------------------------------------     mountain pine b...
XP_015784778 113 tslstlspspssslplflptstsllspsslngnifiqwnqskeslgsfggkisyrkllegkvvnrrkkdyekeqddgeke 192 two-spotted spi...
ELT91656         --------------------------------------------------------------------------------     Capitella teleta
Feature 1                                                                                        
Q05940           --------------------------------------------------------------------------------     human
XP_014249122     --------------------------------------------------------------------------------     bed bug
KFB36380         --------------------------------------------------------------------------------     Anopheles sinensis
XP_016663067     --------------------------------------------------------------------------------     pea aphid
KOC71028         --------------------------------------------------------------------------------     Habropoda labor...
XP_018909911     --------------------------------------------------------------------------------     Bemisia tabaci
XP_002423547     --------------------------------------------------------------------------------     human body louse
ERL91619         --------------------------------------------------------------------------------     mountain pine b...
XP_015784778 193 ignededdhdddgnddrkekkvkeenedgksyrlivkankslntlmegqtdwtgskkvmnphenepidwksipvrrsriv 272 two-spotted spi...
ELT91656         --------------------------------------------------------------------------------     Capitella teleta
Feature 1                                                                                        
Q05940        88 -------------------------vtgnatrdltlhqtatqhmvtnasavpsdcpsedkdllNENVQVGLLFASKATVQ 142 human
XP_014249122  47 ---------------------------------------------------------rtealgEENSRVGLLLSSKAVVQ 69  bed bug
KFB36380      68 --------------------------------------gagsdavvvqptpfptpdgrspaieEENGSIGILLGVKALVQ 109 Anopheles sinensis
XP_016663067  59 ---------------------------------------------dqpllpnslikmklqtleNENEAIGVLLSSKAIVQ 93  pea aphid
KOC71028      45 ---------------------------------------------------------ttngedDENGRVGLLLSSKALVQ 67  Habropoda labor...
XP_018909911  62 --------------------------------------------tnvneiakkalvemekdlrAENGQVGLLLSSKALLQ 97  Bemisia tabaci
XP_002423547  68 -----------------------------------------qnesydnvtssssyktifdvpnMENGRMSILLSSKALVQ 106 human body louse
ERL91619      57 -----------------------------------------------apaslsplqrkfetleEDNGPLGALLASKAFVQ 89  mountain pine b...
XP_015784778 273 elmlkdkfgdagnpkekdshigygthnshrhyhphyyhhhfhnhqlsnapktniqgedkmddnQEERLVGTLFASKAVFQ 352 two-spotted spi...
ELT91656      81 -------------------------------lihpaevyskhfnvseadnitnmldgvaatylNENSKVGWLFSSKAFVQ 129 Capitella teleta
Feature 1           #                                                 ## ###  #                  
Q05940       143 LITNPFIGLLTNRIGyPIPIFAGFCIMFVSTIMFafsssyafLLIARSLQGIGSSCSSVAGMGMLAsvytdd-eergnvM 221 human
XP_014249122  70 LVVNPIVGFAAKSVGyTLPLFVGSVNLLTSSLLFafgesylsLFMARSLQGLASACIGVAGMCLVAeyypve-kersrlM 148 bed bug
KFB36380     110 LLANPIVGSGTARFGyCLPIVFGTVQLLLASLIFgfgtsygsLFVARAIHGLGSACIGVCGMSLVAqlypep-drrsriM 188 Anopheles sinensis
XP_016663067  94 LFMNPLVGILTSYVGyNLPIFLGSILLIVISVLFaygetfvsLLVARSLQGTASALISVSGMCLIAdqnhmsdlrrskvM 173 pea aphid
KOC71028      68 LILNPAVGTLTGTLGyTKPLFLGNLSLLLAAMLFafgqtyevLFLARSVQGISSACIGVSGMSLVAsqypee-dkrskiM 146 Habropoda labor...
XP_018909911  98 LIMNPIVGVLSPRLGvHLSLFIGSVSLLVAALIFalgesfieLLIGRSLQGIASACIGVAGMSLVAqeyped-kershvM 176 Bemisia tabaci
XP_002423547 107 LILNPVVGVITNRVGyTLPLFLGTCTLLISATVFafstgyfaLFLARSFQGVASSCIGITGMCLVAekypee-perskmM 185 human body louse
ERL91619      90 LAFTPVVGYLTQILDcSVPLLIGSCNMLIAALLFafgnsygiLVLARALHGSSSAAVAVSGMCILAknlpke--srnrlM 167 mountain pine b...
XP_015784778 353 LLFNPVSMKLIQSYGhNCTQTIALMVLLCSSLTYafsqgiktMFLARCIHGVGSSIISISGMATIAnlfqde-karcqiM 431 two-spotted spi...
ELT91656     130 LAVNPLVGTLVNRYGySLPMFSGCIVMLLSSLLYafgenyvvLVIARAIQGIGSSCTSVGGLSLLAetyhed-kdrsraM 208 Capitella teleta
Feature 1           #  ##  #                                                                     
Q05940       222 GIALGGLAMGVLVGPPFGSVLYEFvgkTAPFLVLAALVLLDGAIQLFVLQPsrvqpesqk-------------------g 282 human
XP_014249122 149 GIVLGSVALGVLLGYPFGGFLYDFvgkTAPFLGIAFLSVVDVGLQLTFLDLklpsqsccg-------------------k 209 bed bug
KFB36380     189 GTVLGAMAVGVLVGYPFGGVVYELagkAAPFHVLAALCFGNLILQYLQLDCgshrfhaalprvdatst---ttvatderr 265 Anopheles sinensis
XP_016663067 174 GLVMGSIALGVLVGYPFGGILYYFvdkSTPFNVIICAITFNLGLQLYVFNFnlikkvnsfkeilqlkqtnndkhqshfnn 253 pea aphid
KOC71028     147 GFVLGSIALGVLVGYPIGSVLYDLegkMAPFLLVSCFIVVTICLQVFTLDVetktessee-------------------g 207 Habropoda labor...
XP_018909911 177 GIVLGSVALGVLLGYPLGGLLYDIsgkSTPFFVVAFAVLCDLGLQVHYLNFeskfepsvg-------------------v 237 Bemisia tabaci
XP_002423547 186 GFVLGSVAVGVLIGYPFGGFMYDYsgkTGPFLIIVLFICIDGVKEFFFRQKryissg----------------------- 242 human body louse
ERL91619     168 PLAFGGIALGVLIGYPLGGAAYQLlgkSAPFMLIAFFILISIGLQVYILETssqkpngshle---------------sty 232 mountain pine b...
XP_015784778 432 GISLGGIAAGVLVGYPFGGFAYDFcgkQLPFLLIAFLFTLIIGFQLTFMPNekeshlkie-------------------s 492 two-spotted spi...
ELT91656     209 GIALGGTALGVLVGYPFGGAMYQFvgkMVPFLIIALLCIFEGVLQLWFCQPwiksksamt-------------------g 269 Capitella teleta
Feature 1                          #  ##  ###  #                             #   #               
Q05940       283 tplttllkDPYILIAAGSICFANMGIAMLEPALPIWMmetm--csrkWQLGVAFLPASISYLIGTNIFGILAHkmGRWLC 360 human
XP_014249122 210 tswkklmsDGLVMLTAGAIWLSTSVMAILEPCLPLWLmtti--kpekWELGTVFIPDSIGYLIGTNFFGAIAYklGGWRV 287 bed bug
KFB36380     266 ptwwpllsNRLVLVVVGGIWISTSAMAILEPCLPLWMiaql--hpkkWQLGTVFIPDSIGYWLGTNCFGSVAYrfGQIRV 343 Anopheles sinensis
XP_016663067 254 gnwkdllkDGYILLIIFSICLTSSAMAILEPFLPIWLiqii--npekWQLGTVFIPDSLGYLIGTNFFGTLSYtmGQWRM 331 pea aphid
KOC71028     208 tswthllsDPHILIIFGAIWCSTSPMAILEPCLPIWLrthi--kpkkWQLGTVFIPDSVGYLIGTNFFGMIAYryGRSKI 285 Habropoda labor...
XP_018909911 238 wgwshmlsHRLVVLISGALLFSTVAMAVLEPCLPLWLmshi--kpkkWQLGLVFIPDSVGYLISTNFFGPLAYkvGRWQV 315 Bemisia tabaci
XP_002423547 243 --wlqlfsDRKILLTGGAIGISTSTIAILEPCLPIWLlqei--kpkkWQLGTAFIPDSLGYFIGTNSMALIAYqsRRSMI 318 human body louse
ERL91619     233 dqwaallkDKVTVISGLAICICTSTMAILEPCVPMWLlvhmkprpskWQLGAVFIPDSMGYFIGSHFAGLLPV--QPWRI 310 mountain pine b...
XP_015784778 493 fhfvgmvkDLDIMLAIGSIFFTTSITAVCEPILPIYLidsl--napeWQLGIAFLPDAFGYIIGAHILGFDKHsvDKWVI 570 two-spotted spi...
ELT91656     270 splhellmDPYIIIASGAILLPEMAMAMLEATLPLWLiqtm--qpaqWQLGTVFLPDSLGYWIGCNVFGVVSLklGRWLV 347 Capitella teleta
Feature 1                                             ##   #   #                                 
Q05940       361 ALLGMIIVGVSILcipfakniygliAPNFGVGFAIGMVDSSMMPIMGYLVDLrhv-------------------svyGSV 421 human
XP_014249122 288 AIGAMLLVAISAIliptastmegliLPHLGVGLGIGVIDAALVPLLATLVDSrhs-------------------anyAVV 348 bed bug
KFB36380     344 SILALLLVGTACIlipsastvtgllLPHFGLGLGIGVVDAALVPLLATLVDQlresqpeheqvemaspeepdgrhgyGAV 423 Anopheles sinensis
XP_016663067 332 AVLATLLVGISAImipaatttiglaCPHFGLGLGIGIVDSALVPMLANLVDTrhpn------------------vhyGSV 393 pea aphid
KOC71028     286 AVLAMFVVGISTFlipfagtmsqliIPHLGMGLGIGVADAALVPLLASLVDQng---------------------dyGPV 344 Habropoda labor...
XP_018909911 316 VVISMLIIGVSTFmlpqsksmlaliTPHFLLGLGIGAVDAALVPLLASLVDAsl----------------------ySSV 373 Bemisia tabaci
XP_002423547 319 AIPSMILVGLSASlvpaaktmlqlvIPHFFLGFGIGAVDAALVPLLAALVDTkys-------------------thyGAV 379 human body louse
ERL91619     311 SISAMVLAGLSSCyipmantmtqlaIPHFGLGLGVGAVDASLVPLLANFVDNkgs-------------------sqyGPV 371 mountain pine b...
XP_015784778 571 TIISLFLAGFATIlipltthfyqliIPQFASGLSIGITDAAMSTQLASIVDErys-------------------anySMI 631 two-spotted spi...
ELT91656     348 TACALVFTGICVIciplatqithliTPHLFLGLAIGMVDAALMPLLALLVETrhv-------------------svyGTV 408 Capitella teleta
Feature 1        #  ##  ##  #                                      
Q05940       422 YAIADVAFCMGYAIGPSAGGAiakaiGFPWLMTIIGIIDILFAPLCFFLR 471 human
XP_014249122 349 YALQQTAVALAYALGPMLGGElahlmGFPWLMRCIGIINLLYCPLLALLA 398 bed bug
KFB36380     424 YAIQQIAVSVAYSLAPIVGGElvpivGFAAVLRTLGVLNLLYVPLLACST 473 Anopheles sinensis
XP_016663067 394 YALQQTAVSLAYSVGPILGGQvvksvGFPWLMRTVGIINISYCGLLVFLS 443 pea aphid
KOC71028     345 YSIQQVAVSLAYSLGPILGGEmvksiGFQWVMRIVGLMNIGYCPLLIYLT 394 Habropoda laboriosa
XP_018909911 374 YALQQMAVSLAYFIGPMIGGElvraiGFPWLLRVVGLLNILYCCLIVFCV 423 Bemisia tabaci
XP_002423547 380 YAMQQISVSLAYSLGPVFGSGmteivGFPWMMRIVGIINILYSFLLFKLD 429 human body louse
ERL91619     372 YAFQQAAVAVAYSFGPLLGGQavevvGFPWLMRLVGFANLLFCPLLLELE 421 mountain pine beetle
XP_015784778 632 YTFSQIAVCLAYIIGPIVSSIvlpsiGTTGSFHVLGTTVILYGIVCISYR 681 two-spotted spider mite
ELT91656     409 YAIEQVSVSLGFALGSSVGGQmvefvGFAWLMRGMGIACFLFLPLCYFLR 458 Capitella teleta

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