1NLM


Conserved Protein Domain Family
GT28_MurG

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cd03785: GT28_MurG 
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undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase
MurG (EC 2.4.1.227) is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Statistics
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PSSM-Id: 340818
Aligned: 92 rows
Threshold Bit Score: 113.464
Created: 8-Nov-2005
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
active sitehomodimer
Conserved site includes 15 residues -Click on image for an interactive view with Cn3D
Feature 1:active site [active site]
Evidence:
  • Structure:1NLM: E.coli binds UDP-GlcNAc. Contacts at 3.5A.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                   #                                                                 
1NLM_A      8 RLMVMAGGT----GGHVFPGLAVAHHLMaq--gWQVRWLGTADRMEADLVpkh---gieIDFIRisgl---------rgk 69  Escherichia coli
BAB81769    5 KIIMTGGGS----AGHVTPNLALVPKLKel--gFEIKYIGSKNGIEKEIItke---nipYYSISsgkl---------rry 66  Clostridium perfri...
NP_833473   4 TILFTGGGT----AGHVMINIVLIPKFIek--gWRVEYIGSKNGIEKSLVqn-----vkYNSVStgkl---------rry 63  Bacillus cereus AT...
NP_833963   3 KIVFTGGGS----AGHVTPNLAIIPYLQed--nWDISYIGSHQGIEKTIIeke---gipYYSISsgkl---------rry 64  Bacillus cereus AT...
EDO57211    3 RIILTGGGT----AGHVTPNIALIPELRkl--gYDIHYIGSYNGMERKLIedl---nipYHGISsgkl---------rry 64  Clostridium sp. L2-50
NP_355530   9 SVFFYVQHLl--gIGHIARASRVANALQad--gFDVVLVTGGTPVPGFPGe-------gIRHVElppia--------vsd 69  Agrobacterium tume...
Q58462      2 KIAIITDGSvemgMGHVYRTLSLANELRkf-nvNEIIFFTKSDEDVIKKIee-----ngFKVIKcsd-----------nn 64  Methanocaldococcus...
YP_009575 213 HIVFVVAGYpaigMGHIFRALMLAHEVAd----HRITFLCTRESELAASN---------IAARDyrtr----------vq 269 Desulfovibrio vulg...
Q8TTI0      2 KILLFICGEg---LGHTSRCLALGKEFLaagheVSFGAYGYSRELVRKTGysaweiqpeIRLIGetgif-------digk 71  Methanosarcina ace...
Q8PWF3      2 KIMIFICGEg---LGHTSRCLALGKELLaagheIEFGAYGYSRDLVEKTGy-------rIHEIPseiklvgkaggfdlsg 71  Methanosarcina mazei
Feature 1                                                                                     
1NLM_A     70 gIKALIAAPlr---------iFNAWRQARAIMKaykpDVVLGMGGYV--------SGPGGLAAWSl--------gIPVVL 124 Escherichia coli
BAB81769   67 fDIKNFTDPfk---------vLKGVMDASRILSkekpDVIFSKGGFV--------TVPVVIAASMk--------kIPVVS 121 Clostridium perfri...
NP_833473  64 wDWDNFKDPfk---------iIRGCLQSYNLIKktkpDVIFSAGGFV--------SVPVAIGAWLn--------rVPIII 118 Bacillus cereus AT...
NP_833963  65 fDLKNIKDPfl---------vMKGVMDAYVRIRklkpDVIFSKGGFV--------SVPVVIGGWLn--------rVPVLL 119 Bacillus cereus AT...
EDO57211   65 fDLKNFTDPfr---------vIKGMGEAKKLMKelkpDVVFSKGGFV--------TVPVVFAAKSc--------nIPVII 119 Clostridium sp. L2-50
NP_355530  70 sSFSGLVDSs-----------GKPVDEAFKNLRt---DMLIGAYHGAk-------PDIVIIEAFPfgrrqvrfelLPLLD 128 Agrobacterium tume...
Q58462     65 dILKNIKNIkpdvv---iiddLGIEEDFAKNIRelckKLIFFDNPNPss----nkYADIVVNAIVgse----lknRKYFD 133 Methanocaldococcus...
YP_009575 270 qGDDLAADVlslrpdlvindiLNTDADYVGRLR----EAGVRVVNFEd-------EGPGAHLADL----------VVNAL 328 Desulfovibrio vulg...
Q8TTI0     72 sIKETLRNLs-----------PVGFRKLLKLIEvlepDVVLSDGYYSgilaarsrKVPVYFIGHQf--------nMEEFF 132 Methanosarcina ace...
Q8PWF3     72 sIEATLKNAr-----------ILGGPKVLKLIKdfkpDVVVSDSYYLg-------TLAAMLLNIP----------VYLII 123 Methanosarcina mazei
Feature 1        #                                                                            
1NLM_A    125 HEQNGIAGLTNKWLAKi---------------------ATKVMQAFpgaf--------------pnaEVVGNPvrtdvla 169 Escherichia coli
BAB81769  122 HESDLTPGLANKIASP----------------------FCDTLCVTfpeslky--------ikdnkgELTGTPiredllk 171 Clostridium perfri...
NP_833473 119 REPDSTLGLANKIALPf---------------------ATKLCTTFpqtgen---------vsnekkVYVGPIvrveiek 168 Bacillus cereus AT...
NP_833963 120 HESDMTPGLANKIALR----------------------FASKIFVTfeeaakh--------lpkekvIYTGSPvreevlk 169 Bacillus cereus AT...
EDO57211  120 HESDMTPGLANKLELPk---------------------ASRVCCNFpetkdm---------fpegkaVVTGTPirkelfn 169 Clostridium sp. L2-50
NP_355530 129 EIEDSEPRPLVMTSLRdilqektkpgrdeetvslvkkhFDAVLVHGdpdfarledtfplageisqriVYTGLVaplpppe 208 Agrobacterium tume...
Q58462    134 EENKTLYFYGPKYLILrne----------------fykVKKEMLSRs--------------------KNKETK------- 170 Methanocaldococcus...
YP_009575 329 YEEKVDDPRFLHGHRFf--------------------cLRDEFVNGv-------------------rNDYRDPv------ 363 Desulfovibrio vulg...
Q8TTI0    133 QKKGPLLAVAGKLVRRfyny--------------ifssVDGIMVPDyplpysvnrrnftipralnpnIFFSGPlirsryr 198 Methanosarcina ace...
Q8PWF3    124 NQSNMEDFFKNRGVPIrllgdltkk-----fyrevfekTDKIIIPDyplpytvcrknlnfspglwekLYYSGPlvkekye 198 Methanosarcina mazei
Feature 1                             #                            #                          
1NLM_A    170 lplp--qqrlagregpVRVLVVGGSQGAr-ILNQTMPQVAAKlg--dSVTIWHQSGkg-----sQQSVEQAYaeagqpqH 239 Escherichia coli
BAB81769  172 gdkergrkfcnfkenkKVLMIIGGSLGSk-VINESVRKILNEil--kEYNVIHLCGkg-----nLDESLKNLd-----gY 238 Clostridium perfri...
NP_833473 169 gnvlrgrrycefqqdkPVLLIMGGSQGAk-WINDMVRECLDTil--lNFNIIHICGkg-----kVDPSIGMEg------Y 234 Bacillus cereus AT...
NP_833963 170 gnrekglaflgfsrkkPVITIMGGSLGAk-KINETVRSALPEll--kKYQIVHLCGkg-----nLDESLQNKe-----gY 236 Bacillus cereus AT...
EDO57211  170 gnavdainfcgftdnkPVILIVGGSSGSa-VINKAIRENIDKll--eRFNVIHLCGkg-----nLDHSLDNKs-----gY 236 Clostridium sp. L2-50
NP_355530 209 ----------paekfdIVVSAGGGAVGA--ALIRAALEAAPLla--gIKSWCLVTGpnmp-qadFDAISAEApd----nV 269 Agrobacterium tume...
Q58462    171 ----------------NILIAFGGSDPSn-LTCKVLEELLSKd---rDFNINVVLGpkfqyedeLNNLLKRYsks--dkI 228 Methanocaldococcus...
YP_009575 364 ---------------rCVLVTFGGTDHS--DFSRGTLDAIEPlcrerGITIRLVAGpgy---ahKDAMQEHVerl-gspL 422 Desulfovibrio vulg...
Q8TTI0    199 e-------veakafrhPNVLSTIGAFGYraAIFRKVLEAAKLd---pDIHYTFIAG--------PGIVPEQFpei-penV 259 Methanosarcina ace...
Q8PWF3    199 e-------veqiplkkPHIVSLIGGFGYrePIFRKVLTTAALd---sGINYTLISGp------sLDPSKFKEip---knV 259 Methanosarcina mazei
Feature 1         #    #               ####  #            #       ##  #                       
1NLM_A    240 KVTEFi-dDMAAAYAWa-DVVVCRSGALTVSEIAAaGLPALFVPFqh--kDRQQYWNALPLEk---------aGAAKIIe 306 Escherichia coli
BAB81769  239 RQYEYiseELPDLMALa-DLVISRAGANTIFELLAlRKLNILIPLsanasRGDQVLNANSFEk---------sGYSMVIk 308 Clostridium perfri...
NP_833473 235 MQFEYigdELPHILNMa-SVVVSRAGSTAISELLFlKKPMLLIPLtnsssRGDQVLNAEYFSr---------qGYAEVIl 304 Bacillus cereus AT...
NP_833963 237 RQFEYvhgELPDILAVt-DFVISRAGSNAIFEFLTlQKPMVLIPLskfasRGDQILNAESFEr---------qGYASVLy 306 Bacillus cereus AT...
EDO57211  237 VQYEYikkELSSMLALa-DLVISRAGANAICELLAlRKPNILIPLsaaasRGDQILNAESFKk---------sGYSYVIk 306 Clostridium sp. L2-50
NP_355530 270 SVFRFr-kDFASLLAGa-RLSVSQAGYNTVCDILQaKCRSLLIPFaa-ggETEQSARAERLAr---------lGLAQVLe 337 Agrobacterium tume...
Q58462    229 KIYKNi-dNMAELMKDn-DLIITSPGMTMFEALFL-GIPVVVLYQ-----NELQRECYDDYLkkiskthlnplKEGYFId 300 Methanocaldococcus...
YP_009575 423 VEFTYa-tNVMSRMMEgaDLAICSAGRTVYELAHM-RVPAIVMAHhe-reGRHTFARGRNGFay--------lGVMEHFd 491 Desulfovibrio vulg...
Q8TTI0    260 EFTGFt-dNPFPYYRGs-DLVITAGGHGTIMESLAfGLPVLSFPDe---kHTEQENNATVLEd---------aGYGKRMs 325 Methanosarcina ace...
Q8PWF3    260 QILRFv-gDTFPYIRSs-DAVIAPGGHSTMMEALSfGTPILSFPDe---gHSEQENNAAVIEe---------eGYGRMLs 325 Methanosarcina mazei
Feature 1                                                                  
1NLM_A    307 q------pqLSVDAVANTLagw--------sreTLLTMAERARAasi----pdaTERVANE 349 Escherichia coli
BAB81769  309 e------eeLNSELLLKSIkdlek-----nrekYLNSMKMSKIGngv----nniIDIIKKS 354 Clostridium perfringens str. 13
NP_833473 305 q------drVSTNTFIHAVnklytn--kekyiqNMNGYKKTNDEg---------IHQIIDI 348 Bacillus cereus ATCC 14579
NP_833963 307 e------edVNVKSLIKYVeel---------sqNNEKYKTALKKyngk---eaiKTIIQNI 349 Bacillus cereus ATCC 14579
EDO57211  307 e------eeLSSETLFAAIddvyn-----nkqtYIETMEKSNLTdstsi-iigmIEELVNN 355 Clostridium sp. L2-50
NP_355530 338 e------khISAQSMADAIkaalalpepdkihlDLDGAAGTARA----------LHRLYDE 382 Agrobacterium tumefaciens complex
Q58462    301 aehtdlhigKGKFEIIEAItn----------iyNCKKIGEDSKIi---------IRQITDN 342 Methanocaldococcus jannaschii
YP_009575 492 g-------aKLTRVFTQLLda-----------gNRRRLFDRQARfdfirnkadvVRRITAL 534 Desulfovibrio vulgaris
Q8TTI0    326 y-------lTRPEVILACIrevledenyrrktrRLMELAEVLDGpa-------aVRKLLEE 372 Methanosarcina acetivorans
Q8PWF3    326 y-------sTPPEVILECIre----------vlEDKKYRDKVKR----------LQRLASE 359 Methanosarcina mazei

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