3H8H,3GS2,3IXS


Conserved Protein Domain Family
RAWUL_RING1_like

?
cd17086: RAWUL_RING1_like 
RING finger- and WD40-associated ubiquitin-like (RAWUL) domain found in really interesting new gene proteins RING1, RING2 and similar proteins
RING1, also termed polycomb complex protein RING1, or RING finger protein 1 (RNF1), or RING finger protein 1A (RING1A), has been identified as a transcriptional repressor that is associated with the Polycomb group (PcG) protein complex involved in stable repression of gene activity. RING2, also termed huntingtin-interacting protein 2-interacting protein 3, or HIP2-interacting protein 3, or protein DinG, or RING finger protein 1B (RING1B), or RING finger protein 2 (RNF2), or RING finger protein BAP-1, is an E3 ubiquitin-protein ligase that interacts with both nucleosomal DNA and an acidic patch on histone H4 to achieve the specific monoubiquitination of K119 on histone H2A (H2AK119ub), thereby playing a central role in histone code and gene regulation. Both, RING1 and RING2, are core components of polycomb repressive complex 1 (PRC1) that functions as an E3-ubuiquitin ligase transferring the mono-ubuiquitin mark to the C-terminal tail of Histone H2A at K118/K119. PRC1 is also capable of chromatin compaction, a function not requiring histone tails, and this activity appears important in gene silencing. RING2 acts as the main E3 ubiquitin ligase on histone H2A of the PRC1 complex, while RING1 may rather act as a modulator of RNF2/RING2 activity. Members in this family contain a C3HC4-type RING-HC finger, and a RAWUL domain.
Statistics
?
PSSM-Id: 340606
Aligned: 16 rows
Threshold Bit Score: 124.357
Created: 8-Jul-2015
Updated: 2-Oct-2020
Structure
?
Program:
Drawing:
Aligned Rows:
 
heterodimerkey conserved
Conserved site includes 18 residues -Click on image for an interactive view with Cn3D
Feature 1:heterodimer interface [polypeptide binding site]
Evidence:
  • Comment:based on human Ring1B RAWUL domains with structure
  • Structure:3IXS; Homo sapiens RING1B RAWUL domain binds RYBP (Ring1 and Yy1-binding Protein), contacts at 4A
  • Structure:3GS2; Homo sapiens RING1B RAWUL domain binds cbox domain from cbx7, contacts at 4A
  • Comment:the two C-RING1B binding partners, RYBP and cbx7-cbox, bind to the same site on the surface of C-RING1B

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
Feature 1          ###                        ####    #  ### ##  ##                              
3H8H_A         7 EIELVFRPHPtlmek-------ddsaQTRYIKTSG-NATVDHLSKYLAVRLALEelrskgesnq----------mnldta 68  human
EFX70340     238 EIELVFKPHPvemgndndlikalkenSIRYIKTTS-NATVEHLSKYLAMRLTLDlesei-------------------pd 297 common water flea
NP_477509    326 EIELVFKPHPtemsadnqliralkenCVRYIKTTA-NATVDHLSKYLAMRLTLDlgadlp-----------------eac 387 fruit fly
XP_013395499 220 EIELVFKPHPmdeie-------diaaYTRYIKTTA-NASVDHLAKYLYMRLALErqarepgt-------------steds 278 Lingula anatina
XP_013088486 235 EIELIFKPHPndtei------vdpasQTRYIKTTA-NATVDHLSKYLAIRLSLDnasenee---------------eeqs 292 Biomphalaria gl...
ELT89389     223 DIELLFKPHPdmeq---------dvsQTRYIKTSA-NATVNHLGKYLAMRLALEnqlnsgeds-----------gesasl 281 Capitella teleta
XP_011684263 175 EIELVFKPHPdeimh-------srpyMVRYLKTSA-LASIDHLAKYLSMRIALDlrdagsmdsqs--------ssnqneg 238 purple sea urchin
KPM07266     190 EIELIIKPLPqverk------dpslnQTRFLKTTT-TATIDHIAKYLKIRYNFEsseeeresdrnenesnhsdskdfnkn 262 Sarcoptes scabiei
XP_009858009 266 SVELELHPHPdqtgs-------kveqTVRFIKTSV-HATVHHVAQYIALRNTVEkqttkgtvv------------ptald 325 vase tunicate
KFD60745     246 EVGVIMRPHPdiennek---yplyirQPRYLKTSPsLATVAHLTRYVVMRVQLDmdkayrdsddqlea-srrlgavgiee 321 pig whipworm
Feature 1                                                             ###      
3H8H_A        69 sekQYTIYIATASGq-----------------FTVLNGSFSLELVSEKYWKv-NKPMELYYA 112 human
EFX70340     298 sltNFCIYISPGPNq-----------------FVVLSGMQTLDDVNEKYWKs-NQPLEMFYS 341 common water flea
NP_477509    388 rvlNFCIYVAPQPQq-----------------LVILNGNQTLHQVNDKFWKv-NKPMEMYYS 431 fruit fly
XP_013395499 279 gdkNYTIYISPTPGs-----------------HVLLSGALTLEQVNEKYWKv-NKPLEMFYS 322 Lingula anatina
XP_013088486 293 gsrLFDIFVSTQPGq-----------------FVLLSGPTSLEQVKEKYWKf-NKPLEIFYS 336 Biomphalaria glabrata
ELT89389     282 kpeAYRIYVSTTAGq-----------------FSMMDGNESLDHIHERYLKa-NKPLELFYM 325 Capitella teleta
XP_011684263 239 gcgEFTIFISTYPGqfqpltgnqtleqvneskSESLNGCQTLEQVNERHWKa-NRPLEMYFL 299 purple sea urchin
KPM07266     263 emfPFTLYIAAGPGq-----------------YNPLQGSVTLAQIDEDYWKl-NKPLELFYA 306 Sarcoptes scabiei
XP_009858009 326 vypEYTIFVKENEL------------------YKDLELTETLETVQEKYWNpdNRPLVYYLK 369 vase tunicate
KFD60745     322 karHCELFGLAGNNh----------------lTLISGGSTTLEMIMNKYARr-KTPMELYFR 366 pig whipworm

| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap