1WFY


Conserved Protein Domain Family
RBD2_RGS12_like

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cd17067: RBD2_RGS12_like 
Ras-binding domain (RBD) 2 of regulator of G protein signaling 12 (RGS12) and similar proteins
Regulator of G-protein signaling (RGS) proteins belong to a large family of GTPase-accelerating proteins (GAPs) which act as key inhibitors of G-protein-mediated cell responses in eukaryotes. The RGS12-like subfamily is composed of RGS12 and RGS14, with multidomain architectures including a RGS domain, two tandem Ras-binding domains (RBDs), and a second Galpha interacting domain, the GoLoco motif. The RBD is structurally similar to the beta-grasp fold of ubiquitin, a common structure involved in protein-protein interactions. Ubiquitin is a protein modifier in eukaryotes that is involved in various cellular processes, including transcriptional regulation, cell cycle control, and DNA repair in eukaryotes.
Statistics
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PSSM-Id: 340587
Aligned: 27 rows
Threshold Bit Score: 92.6195
Created: 12-Oct-2016
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
key conserved
Conserved site includes 2 residues -Click on image for an interactive view with Cn3D
Feature 1:key conserved lysines
Evidence:
  • Comment:2 (K11/R, K33/R, Ub numbering) of the 7 lysines involved in chain linkage in ubiquitin (K6, K11, K27, K29, K33, K48, or K63, Ub numbering) are conserved are a majority of members of this family; may have roles other than chain linkage

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                      #                     #                                       
1WFY_A         16 RITFQLELVg-lERVVRISAKptkRLQEALQPILAKHGlSLDQVVLHRPg-EKQPMDLENPVSsvASQTLVLDTP 88   house mouse
O14924       1032 RTLFRLDLVp-iNRSVGLKAKptkPVTEVLRPVVARYGlDLSGLLVRLSg-EKEPLDLGAPISslDGQRVVLEEK 1104 human
XP_002609053 1219 RVLFKLDLPslgKFSLRVKVKptkPVAEVMRTVLNKYSlRLEEAIIRLDg-NALPLDLGIPAAtlENQKVIVEPT 1292 Florida lancelet
EFN69214      935 TKVLKVELPs--RRIISVIAHkgkTLKEVLRPLLNKYGfNLDLISIWSEg-HCVPMDIMAINA--PTRLIVVANE 1004 Florida carpenter ant
XP_006820381  411 RVMFKVELPstnKRTIGVKSKpnkAIIDVLRPIMNKYNlSLDGMVVHLNa-SPVPLELDIEVAtlEGQRVIIEPY 484  Saccoglossus kowal...
XP_012555234   66 RVLFRFDLPn--NRSVGIKSNpnkTLHDILQPVMKKNGfDISNFNILLFd-SKSCLALNTIIKnvENKRLVTKRA 137  Hydra vulgaris
KXJ09749      125 RSLFRVELSk--GLAYLVKARpdqSIXESIEPLLARFNmEYSSVXLHLVd-CEVPLDSGIPVAsiENQYIIIESN 196  Exaiptasia pallida
XP_015769272  878 RTLFRLELPd-gIMPLCVKVKpeqNVRLFLEPILSRQGlPSDHVMVHLAg-REVPLDPDIPASsiEHQCVVVETD 950  Acropora digitifera
ODM92977     1055 RAFIGIELPh--GWKVGVRANpnrKVAEVLKPILSQHSlKLDAVVVYDLe-TCEILDTKCPMGklDSHNLLVKSK 1126 Orchesella cincta
XP_018027349  807 LVLFRLDLPn--QKTVCVKAKphkLASDVLRPILAKYGfKLDLMHIHTVeeNPRPVNVKGQITelDGQKFVVQTK 879  Hyalella azteca

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