Conserved Protein Domain Family
RBD1_RGS12_like

?
cd01817: RBD1_RGS12_like 
Ras-binding domain (RBD) 1 of regulator of G protein signaling 12 (RGS12) and similar proteins
Regulator of G protein signaling (RGS) proteins belong to a large family of GTpase-accelerating proteins (GAPs) which act as key inhibitors of G-protein-mediated cell responses in eukaryotes. This RGS12-like subfamily is composed of RGS12 and RGS14, with multidomain architectures including a RGS domain, two tandem Ras-binding domains (RBDs), and a second Galpha interacting domain, the GoLoco motif. The RBD is structurally similar to the beta-grasp fold of ubiquitin, a common structure involved in protein-protein interactions. Ubiquitin is a protein modifier in eukaryotes that is involved in various cellular processes, including transcriptional regulation, cell cycle control, and DNA repair.
Statistics
?
PSSM-Id: 340515
Aligned: 28 rows
Threshold Bit Score: 94.1475
Created: 5-Oct-2004
Updated: 2-Oct-2020
Structure
?
Aligned Rows:
 
key conserved
Feature 1:key conserved lysines
Evidence:
  • Comment:2 (K33/R, K48/R, Ub numbering) of the 7 lysines involved in chain linkage in ubiquitin (K6, K11, K27, K29, K33, K48, or K63, Ub numbering) are conserved are a majority of members of this family; may have roles other than chain linkage

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
Feature 1                                         #                #                    
O14924        962 KHCCIHLPDgTSCVVAVKaGFSIKDILSGLCERHGINGAAADLFLVGGDKPLVLHQDSSiLESRDLRLEK 1031 human
EFX88729     1090 PLVKVLLPDmSSAVIAARpGQSVQQLLNKLLERRGLRFNAFELFDSHHSTSIELERDASvVGGMEIRLEP 1159 common water flea
XP_013781755 1112 HLCRVILPDkSTTVIKTQpGETIGTMLRRLIERRGLGFSAADAFIVATGKAVDQNADVAtLGYQELRMEQ 1181 Atlantic horseshoe crab
KPM11338      247 HLLRIVFPDrSQTVIPPSpNETIDGLLTRLIEKRSLKYLAWDVFVTGSDKPLDPNTNANqLGCSELRVEQ 316  Sarcoptes scabiei
XP_014275014  773 GLCRVILPDgSTAVIHTRpDQTVRDTVSRLLLKRSLSYNDFQVFHSYTNKAIPLEEDASvLSGLEVSIER 842  brown marmorated stink bug
XP_015907009 1055 HYCRVILPDlSTTVVRTQsGETVGEMLLKLLERRSLTYNAVEAYIVGSHQPLDHCTDVTsLSCKEIRVEQ 1124 common house spider
OAD51922      890 GLCRVILPDgSTTVVPTSqTESIKDVVTRLLDKRALRYSNYDVLILATDETIDVKYPSSvLAGQEVEVVP 959  Eufriesea mexicana
XP_017489392  552 HLLRISFPDrSQTVAYGTaRETLESLITRLLQKRHLDFSAFDVFKTGENVPLDTSLQTTsLGCSELRIEQ 621  snowberry fruit fly
ODM92977      985 KICRVVLPDnSTTVVPCIpGETLGAVVQKLLKKREFHYSAFEVVSASSGKTLDVNMQVTdMTTREIKVEP 1054 Orchesella cincta
JAT95871      732 ILSRVILPDgSSTVVRVHrGETVGAMLMLLLQKRSLTYSVVDIFIAGSDKPINPNVDVTlVGCKEIHVEP 801  Amblyomma aureolatum

| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap