Conserved Protein Domain Family
MFAP1

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pfam06991: MFAP1 (this model, PSSM-Id:311132 is obsolete and has been replaced by 462060)
Microfibril-associated/Pre-mRNA processing
MFAP1 was first named for proteins associated with microfibrils which are an important component of the extracellular matrix (ECM) of many tissues. For example, MFAP1 has been shown to be associated with elastin-like fibres at the base of Schlemm's canal endothelium cells, in the juxtacanalicular tissue, and in the uveal region. Based on its role in the ECM and the proximity of the MFAP1 gene to FBN1 it was hypothesized that mutations in MFAP1 contributed to heritable diseases affecting microfibrils, Marfan syndrome but this has now been shown not to be the case. MFAP1 has also been shown to interact directly with certain pre-mRNA processing factor proteins, Prps, which are also spliceosome components and is thus required for pre-mRNA processing. MAFP1 bound to Pr38 of yeast is necessary for cells in vivo to progress from G2 to M phase.
Statistics
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PSSM-Id: 311132
Aligned: 117 rows
Threshold Bit Score: 122.311
Created: 21-Jul-2016
Updated: 4-Aug-2016
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q54SU3       207 YWDQpPIfRPTFIKKDDRGTIKT-DE-QWEKEEQEQQAQLEREKEQRKIEAHRKLKDELDRDRKEQEAKELEQKEeeEYD 284 Dictyostelium d...
XP_016293307 152 sAPQpLL-KPIFVPKRARTTTQP-D---PAPSQASVEHAAEALAAQRRQEAHDLAASTIKRSLAEAEHADT--LR--TDV 222 Pseudozyma bras...
XP_001730999 183 emPApLP-KPIFVSKRDRVTHAS-GP-TEHVESTRRGVEEKRIHRER---AHELAAQRIVRDMQEREHEDSQC-----EV 251 Malassezia glob...
EIE90947     168 dtlsrLP-KPVFIPKAKRETILE-QE-KLAKEREEREKRLEEEMEERKKQSHTMLADELKREQEELLAKDLTEHE--DMP 242 Rhizopus delema...
ESA03986     186 qtsRkLL-KPVFIPKAHRETVLE-RE-RMEKLEEEAERKRLQELEERKKESHAMVEEYVQKALQKEVNEDT--GL--QEV 258 Rhizophagus irr...
EPB93130     180 dtiasLP-KPVFIPKARRETILQ-QE-KLAKEAEEREKKLEEELEARKKQSHDMLAEELRREQEEAAHKDTNEYE--QSV 254 Mucor circinell...
CCU98377      45 EAPApLL-KPVFVSKRDRKSASA------PTEHVDTTRRDAASAHAAKQVAHDLAAARVVRDLQEKQHEAAHR-----EV 112 Malassezia symp...
CCF50310     155 eAPKpLL-KPIFVPKSARSTIAK-TEvETSQAEEDPEAKAAAEAQRRRKEAHDLAAATIQRSLLQTQHESTQSTE----V 228 Ustilago hordei
CBQ69921     166 pAPQ-PMlKPVFVPKRARSTIASsAA-ASEAPEADAEAKAEALAAARRKEAHDLAAATIKRQLAEKEHADSHP----TDV 239 Sporisorium rei...
GAC75553     165 aAPP-PLaKPIFVPKRARTTIAAgTA-DTEAAQEDAEAKAEEEAAKRRQEAHDLAAATIKRQLAEKEYQETHA----TDV 238 Pseudozyma anta...
Q54SU3       285 DDEDQ--DGSKKLLWIQRELERVRLEIHTRLLAEFEKKEFARRRAMTDD--QILKEDPSRSR--TNI--DNSQKKQLKFL 356 Dictyostelium d...
XP_016293307 223 DDTDGldPSAEFEAWRQRELSRLHRDRDALLTLQAEQAEIEAFKSLPEA--EKERLGRERAAqlQAE--KREQKGNPAFL 298 Pseudozyma bras...
XP_001730999 252 DDTDGmdPEAEFAAWRIRELARLERIRQAERMRESQEAEKARRRAMPEH--ERLAEDLAHAR--HTR--AAKQRGHQGFM 325 Malassezia glob...
EIE90947     243 DDTDGldEEAEYEAWKLRELARIKRDREARITREKEEEELERRRALPEE--VRLKEDLERAK--ESK--NKE-KGQHTFL 315 Rhizopus delema...
ESA03986     259 DDTDGldEQAEYEQWKLRELLRIKRDKEERIAREIEREEIERRRNMSEE--QRLKEDMERIK--KQR--EEKPKGQYKFL 332 Rhizophagus irr...
EPB93130     255 DDTDGldEEAEFNAWKVRELTRIKRDREERIAREKEEEELERRRALPED--VRLKEDLERAE--ASK--N-KDRGQHTFM 327 Mucor circinell...
CCU98377     113 DDTDGidPDAEFAAWRARELARLERLRVADEARQAEAAELQRRRALSEA--ERLEEDLAHAQ--STR--QAKQRGQQGFL 186 Malassezia symp...
CCF50310     229 DDTDGldPEAEFAAWRERELARLRRDQDALLAKQAEQREIEEFKSLPES--EKERLGRERAA--KLKteKMEQRGERGFL 304 Ustilago hordei
CBQ69921     240 DDTDGldPDAEFDAWRQRELARLQRDRDALLAQRAEQAELERFRALPEAekERLGRERAARQ--QAE--KKEHRGNPAFL 315 Sporisorium rei...
GAC75553     239 DDTDGldPEAEFEAWRQRELARLQRDREALDEKRKAQAELDAFRALPESekERLGRERAKQQ--AAE--KREQRGNPAFL 314 Pseudozyma anta...
Q54SU3       357 QRDYHRGAFFQDD-EYIKNKDFSAPTGEDKFNRELLPKVMQVKNFGKAGRTKYTHLKDQDT 416 Dictyostelium discoideum
XP_016293307 299 QKYYHKGSFFQD--MDILKRDYTEKTSKD-VDVSQLPKMMQVRGYGVKGRSKWTHLANEDT 356 Pseudozyma brasiliensis GHG001
XP_001730999 326 QKYYHKGAFFQD--MDILQRDYTHSTV-DAVDKSQLPHIMQKRNFGKRSQSKWTHLAGEDT 383 Malassezia globosa CBS 7966
EIE90947     316 QKYYHKGAFYHNPdDEIFQRDYSAPTVDEVRNKELLPKVMQVKNFGLAGRTKYTHLVDQDT 376 Rhizopus delemar RA 99-880
ESA03986     333 QKYYHKGSFYLKEdDEILKRDYTLSTPDEVAHREILPKVMQVKNFGRAGQTKWTHLADQDT 393 Rhizophagus irregularis DAOM 181602
EPB93130     328 QKYYHKGAFYQDd-SEVLQRDYSAPTVDEVRNKDVLPKIMQVKNFGLAGRTKYTHLVDQDT 387 Mucor circinelloides f. circinello...
CCU98377     187 QKYYHKGAFFQD--MDILQRDYSQSTV-DAVDKRHLPQILQKRHFGQRSQSKWTHLAAEDT 244 Malassezia sympodialis ATCC 42132
CCF50310     305 QKYYHKGSFFQD--MDILKRDYSEKT-EKEVDVSKLPKMMQKRGWGEKGRGKWTHLANEDT 362 Ustilago hordei
CBQ69921     316 QKYYHKGSFFQ-D-MDILKRDYTEKTTKDV-DVSKLPKMMQVRNYGVKGRSKWTHLANEDT 373 Sporisorium reilianum SRZ2
GAC75553     315 QKYYHKGSFFQ-D-MDILQRDYTEATSSQV-DVSKLPKMMQVRNFGAKGRSKWTHLANEDT 372 Pseudozyma antarctica T-34
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