Conserved Protein Domain Family
Seipin

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pfam06775: Seipin (this model, PSSM-Id:310999 is obsolete and has been replaced by 462007)
Putative adipose-regulatory protein (Seipin)
Seipin is a protein of approximately 400 residues, in humans, which is the product of a gene homologous to the murine guanine nucleotide-binding protein (G protein) gamma-3 linked gene. This gene is implicated in the regulation of body fat distribution and insulin resistance and particularly in the auto-immune disease Berardinelli-Seip congenital lipodystrophy type 2. Seipin has no similarity with other known proteins or consensus motifs that might predict its function, but it is predicted to contain two transmembrane domains at residues 28-49 and 237-258, in human, and a third transmembrane domain might be present at residues 155-173. Seipin may also be implicated in Silver spastic paraplegia syndrome and distal hereditary motor neuropathy type V.
Statistics
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PSSM-Id: 310999
Aligned: 134 rows
Threshold Bit Score: 63.304
Created: 20-Jul-2016
Updated: 4-Aug-2016
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q6C222        24 QLTLLFAAIAYVALYQFYIPVNS-LSLPLDFDFSTEDG----------AYAVAKLhgdvvslnyvepathalwkyvpfvs 92  Yarrowia lipoly...
O14119        18 GLFSIPSLVSYVIFYDTVIPHSV-IQYPVYFNYTTGLNf---------PTAEVRL------------------------- 62  Schizosaccharom...
Q8MXG1        16 SVAIFIAAVTPLLIRYCLLPSSVhHQYQLNIVFQTCDHdlhs--vcsfPAATLEYe------------------------ 69  Caenorhabditis ...
EGT47024      18 FVALLIAAVTPLLIRYFILPTSIhHQYPLNIIFHTCDHdlhs--vcsfPAATLEYe------------------------ 71  Caenorhabditis ...
XP_002636815  17 SIVAFIAAFLPLLIRYAALPTSVhHQYPLNVVFRTCDHdlhs--vcsfPSATLEYe------------------------ 70  Caenorhabditis ...
EJW80516      28 FGAFVVAVISPFLLRQLLLPSLVeYTVPLHFNFETCREqlag--vcsfPTAVVDFsm----------------------- 82  Wuchereria banc...
EFO26099      28 FGAFIISVASPFLLRQVLLPSFVeYTIPLHFNFETCREqlag--icsfPTAVVDFsl----------------------- 82  eye worm
EDK38106      26 AILLPLSILSYLYFYSTLIPISV-LRVPITFSPkesfheerrgyanlePYIKV--------------------------- 77  Meyerozyma guil...
XP_013022606  22 VLFSIPSLVSYIIFYDTVIPHAV-VQYPVYFNYTTGSDy---------PYAKVNL------------------------- 66  Schizosaccharom...
XP_002172789  18 CCLSVLSSVFYSVFYNLVIPSSL-VTYNVHFEEVSNLK------------ATVPLd------------------------ 60  Schizosaccharom...
Q6C222        93 tpspapeaphnrvttfgrprdriKTLRFMNMPYSV--------YVNLDL---PETDR------NLGTGNFMIRVSFADdl 155 Yarrowia lipoly...
O14119        63 ------------------------------DHFSIdprlpgtsLLQIKM---PHSPR------NSAMGNFMVSVDFQD-- 101 Schizosaccharom...
Q8MXG1        70 ----------------------kNSLFSPNVAYYL--------NVRLKF---ADVIN------TNKLGLFQNVITITD-- 108 Caenorhabditis ...
EGT47024      72 ----------------------kNSLFSPNIAYYL--------NVRLKF---ADIAN------SNKLGLFQNVITMID-- 110 Caenorhabditis ...
XP_002636815  71 ----------------------kNSLFSPNVAYYL--------NVRLKF---ADIAS------SKKLGFFQSVISITE-- 109 Caenorhabditis ...
EJW80516      83 ----------------------eNLKLSPGENYEI--------SVEIIL---SESTI------ASNVGIFQAVVELVD-- 121 Wuchereria banc...
EFO26099      83 ----------------------eNPKLSPGDNYEV--------SIEIVL---SESTI------ISNVGVFQAVVEFVD-- 121 eye worm
EDK38106      78 ------------------------FEQTPDLMYLL--------SLNLDIicySEKNSirsvihNVTLGSYSARSTFVL-- 123 Meyerozyma guil...
XP_013022606  67 ------------------------------DHFSIdprlpgtsILQLSI---PRSRR------NREVGNFMISVDFHG-- 105 Schizosaccharom...
XP_002172789  61 -----------------------ASVLGKEIPYTV--------ELEWSF---PTSET------NAQIGNLKVDLAVTD-- 98  Schizosaccharom...
Q6C222       156 evfRsTHRltrdnrkrwplthneeyavrpnvgsinkrekrdraeklhkedriitdhqpehhplpALFTATRPA----ILA 231 Yarrowia lipoly...
O14119       102 ---RnQR---------------------------------------------------------SLKQVKRTV----LLP 117 Schizosaccharom...
Q8MXG1       109 ---E-NQK--------------------------------------------------------ILKQYTKSA------- 121 Caenorhabditis ...
EGT47024     111 ---E-NER--------------------------------------------------------VLKQYTKSA------- 123 Caenorhabditis ...
XP_002636815 110 ---E-NGK--------------------------------------------------------VVQQYTKSA------- 122 Caenorhabditis ...
EJW80516     122 ---PlN----------------------------------------------------------MKRTFRKSC----FVN 136 Wuchereria banc...
EFO26099     122 ---QlN----------------------------------------------------------IKRTFRRSC----FAN 136 eye worm
EDK38106     124 ---NcEED--------------------------------------------------------YIFHSNNRLipykLRH 144 Meyerozyma guil...
XP_013022606 106 ---RtEQT--------------------------------------------------------TIKSVSRTV----LFP 122 Schizosaccharom...
XP_002172789  99 ---N-RG---------------------------------------------------------FNETTSKVV----VLP 113 Schizosaccharom...
Q6C222       232 FQSATMRVM---------DTL--LFAPLYLTGWKKQEQ--RLHVYMASNW----------------HVPADvedHEFAYA 282 Yarrowia lipoly...
O14119       118 HRSPIHEYL---------KLI--VCSPLYFMGILEETD--IVNVRLFESEtfaksfnsittlsvrfSVK-----NTPAQA 179 Schizosaccharom...
Q8MXG1       122 YVKEAGLIQ---------KAMhlFLFPFYFLGFFHDYS--TLAIPMSADY----------------LEGID---SPSTKL 171 Caenorhabditis ...
EGT47024     124 YVKEPGLII---------KSSqvFLFPLYFLGFFYDYS--SLAIPMSADY----------------MEKID---APSTKL 173 Caenorhabditis ...
XP_002636815 123 YVKEPGLIT---------KASqvFLFPLYILGYLYDYS--TLTISMSENY----------------LEQLG---SPSTKL 172 Caenorhabditis ...
EJW80516     137 RHHSLIYRIvegwwnlacQT---LFFPVYFLGLLTMSDnrKLEVSFTNHL----------------VDSDL---ENTALL 194 Wuchereria banc...
EFO26099     137 IHHGVIYRIaqwwwnlacRT---LFFPAYLFGLLTIFNdrQLEVSFTNRL----------------VASDL---TNIALL 194 eye worm
EDK38106     145 YVSPQLTDI---------RKI--------------------VNVNSQYSL----------------QSGRQiseTSSYNA 179 Meyerozyma guil...
XP_013022606 123 HYSSIHEQL---------KLV--LCFPLYLAGILEERD--TVSVKLLESEmfgkhrsaintlssrfYVG-----DSPKSA 184 Schizosaccharom...
XP_002172789 114 YTSSYLKKL---------KVL--ALAPLYITNILREKD--SARVTLFQSKilrpayyg--------hvvndygsSKQVTA 172 Schizosaccharom...
Q6C222       283 IVELD--RTVDIYGAQIEWRVEWTGLRYFMYHHRALAFLLGTAVLW 326 Yarrowia lipolytica
O14119       180 IVKIYs-KDIEFYEATLAFASKLHGMRWFMYTHKVSAFLVFTSLFW 224 Schizosaccharomyces pombe 972h-
Q8MXG1       172 VFVVQd-KFANIEEAELIVTARFGLIRHLLYYWPTTSYATIFVSTF 216 Caenorhabditis elegans
EGT47024     174 VFTVQd-KFASIEEAELIVTARFGFIRHVLYYWPTTSYTILFIAVF 218 Caenorhabditis brenneri
XP_002636815 173 IFTVQd-KFANIEEAELTVTARFGLIRHLIYYWPVMSYTAILVCGN 217 Caenorhabditis briggsae
EJW80516     195 YVQLQn-RFIEVESGKLSFRIRFGLLRVFLHDYPIISSLLIIIFVY 239 Wuchereria bancrofti
EFO26099     195 YVQLEn-RFVEVESGKLSIKIRLGLLRIFLHKYPIISSLLIITFTY 239 eye worm
EDK38106     180 RIDVHrnTDVDDNHSFLEFYVQWDGIRYYMVTYYKSSMLVGIIIFW 225 Meyerozyma guilliermondii ATCC 6260
XP_013022606 185 SIHIHs-KDIEFYDATLAFASKLHGMRWFMYTHKVSAFFVFTALFW 229 Schizosaccharomyces cryophilus OY26
XP_002172789 173 TLQVDs-SKLEIYEAKLHFVPQINDVRSFMYKHRIISFFFLSSVFW 217 Schizosaccharomyces japonicus yFS275
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