Conserved Protein Domain Family
Ifi-6-16

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pfam06140: Ifi-6-16 (this model, PSSM-Id:310612 is obsolete and has been replaced by 461837)
Interferon-induced 6-16 family
Statistics
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PSSM-Id: 310612
Aligned: 59 rows
Threshold Bit Score: 31.0732
Created: 18-Jul-2016
Updated: 4-Aug-2016
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q6IEC9         9 AAGAIAAAPAL----LTA----AGFTGAGIAAGSVASWMMSTTAvaSGGGVAAGSAVAVLQSAGAA-GISMAGQAVVGAV 79  zebrafish
ESA04426      47 GLVGAIVVPLI----LSAiicgLGFGVEGVAAGSFGSWFMSLY----GGMIARGSLVSILQSIGAA-GLGTLGTSISSSF 117 Rhizophagus irr...
ESA04430      47 GLVGAIVAPFI----LTAiirgLGFGLGGIAAHSFGSWFMSLY----RGTIARGSVVSILQSIGAV-GLGALSIFLSSGF 117 Rhizophagus irr...
ESA21334      47 GLASAIVAPFI----ISAiiyaLGFGTGGIAAHSFGSWFMSLY----GGVIAHGSLVSILQSIGAA-GLGSLGIFLSSSF 117 Rhizophagus irr...
XP_003333564 192 AVLGAVASPFLtqasIAA----AGFGAQGIVAGTPAAALMASY----GGSVGSGSACAILQSIGAA-GLGVGGVAVAAGV 262 Puccinia gramin...
XP_003027873 197 AAVGVALTPFLgplvLSA----AGFTSSGVAAGSMAAWVHSMI-----GNVLAGSFFAGAQAAGATgAIPAIGLAIAGGV 267 Schizophyllum c...
CBY10099      17 AAVGFFAAPIA----LGA----IGFTAGGIAAGSAAAATQAAI-----GNVAAGSAFAVLQSAAAT-GAAATAGAAIGGT 82  Oikopleura dioica
XP_011133529  17 AGLAVAATPLV----LAG----LGFTAGGVAAGSLAAATQSAF---YGGATT--GAFSALQSAGVL-GVGALGTTVAAAT 82  Gregarina nipha...
XP_014170493 144 GVVPATGIVLI----LNA----VGFGPGGVVAGSLAASAHSSI-----GSVAAGSLFAMLQSAGAG-GAAASLTAICGAV 209 Grosmannia clav...
XP_011488787  14 GVAAVVLTPAV----IAA----LGFSAAGIVAGSIAAKLMALFS--TGGFVP--GFIALLQSFGAI-GFSWSGLTLTFGT 80  Japanese medaka
Q6IEC9        80 GAAMAT 85  zebrafish
ESA04426     118 gaaigi 123 Rhizophagus irregularis DAOM 181602
ESA04430     118 gaaigi 123 Rhizophagus irregularis DAOM 181602
ESA21334     118 GAAIGi 123 Rhizophagus irregularis DAOM 181602
XP_003333564 263 GGFLAY 268 Puccinia graminis f. sp. tritici CRL 75-36-700-3
XP_003027873 268 GGVTAf 273 Schizophyllum commune H4-8
CBY10099      83 TAAVAE 88  Oikopleura dioica
XP_011133529  83 GATAGK 88  Gregarina niphandrodes
XP_014170493 210 GGYIGA 215 Grosmannia clavigera kw1407
XP_011488787  81 GSVLGN 86  Japanese medaka
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