Conserved Protein Domain Family
Radial_spoke_3

?
pfam06098: Radial_spoke_3 (this model, PSSM-Id:310588 is obsolete and has been replaced by 461827)
Radial spoke protein 3
This family consists of several radial spoke protein 3 (RSP3) sequences. Eukaryotic cilia and flagella present in diverse types of cells perform motile, sensory, and developmental functions in organisms from protists to humans. They are centred by precisely organised, microtubule-based structures, the axonemes. The axoneme consists of two central singlet microtubules, called the central pair, and nine outer doublet microtubules. These structures are well-conserved during evolution. The outer doublet microtubules, each composed of A and B sub-fibres, are connected to each other by nexin links, while the central pair is held at the centre of the axoneme by radial spokes. The radial spokes are T-shaped structures extending from the A-tubule of each outer doublet microtubule to the centre of the axoneme. Radial spoke protein 3 (RSP3), is present at the proximal end of the spoke stalk and helps in anchoring the radial spoke to the outer doublet. It is thought that radial spokes regulate the activity of inner arm dynein through protein phosphorylation and dephosphorylation.
Statistics
?
PSSM-Id: 310588
Aligned: 52 rows
Threshold Bit Score: 235.198
Created: 19-Jul-2016
Updated: 4-Aug-2016
Structure
?
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
Q17LG5         144 YQNVMHDRRVVRGSNFTSSNIH----TGDGDSL--QKEAE--ARRR-QL----VR-KKHvaRNQRGi--------iGTPP 201  yellow fever...
7_pfamImport     1 PANIMYDRRVIRGSTYAAQSLHstgpELKPTKR--TRSKP--P---------------------------------QTPE 43  
A0DT20          45 gsNIMFDKRVVRGNTYASVQTQg------------DKKLMtlKSFK-KP----QQ-KAAqqPQTTyl-------hpSTPR 99   Paramecium t...
A0EG05          22 PCNIMWDKRVIRGNTYSSVLNKs------------EPTMQttIKRI-QNtkvvTE-K----------------------K 65   Paramecium t...
24_pfamImport    1 ----MFDKHVVRGNTYARIITSk------------DSETAlpQRHT-QY----QK-KNLqsQIKDIsdlqkdqyepQTPK 58  
XP_001022082    37 vQNLMFEKRVVRGNTYARIITS----KDNEIKNatKSGKS--FKKTiQI----QK-EQIdyQRDQYe--------pGTPK 97   Tetrahymena ...
XP_001323328    30 PCLITVDPRVCRGSTYSRHK---------PVEQeaPKPKP--KRKL-AS----PRdRSLmaGIPNDt--------lVAAP 85   Trichomonas ...
XP_002784053    28 MMSLMNDRRICRGSTYARVPAQ----NRH------DSERE--IQKK-KV----QR-ANVvqEMSRRg--------pST-E 80   Perkinsus ma...
XP_002776754   687 lvgLMGDSRICRGSTCGRVRVPv--qEKSNWARssDLARE--MQRR-KL----QR-ADRvgGVSREs------------- 743  Perkinsus ma...
XP_001705189    25 PVNSMSDPRVAKGSTWAREAGG----SNYGRSLglTNTRT--RALQ-NA----AR-T----GVSDLm--------sMVPE 80   Giardia lamb...
Q17LG5         202 AVRGRKHENVQT-EKYLEEIFIRPPEIDAGCQTDLFLHRPPSPPYVPQKIGHDVGTEIL-EGELFDFDTEVQPIIEVLVG 279  yellow fever...
7_pfamImport    44 PVEGRRHMDIQT-EQYLEELVDTVPESDVTTQTDAFMDRPPTPLFVPMKIGIDVQTQIE-DGDLFDFDFEVEPILEVLVG 121 
A0DT20         100 PFQNRVNIDIQT-DEYLEILTDKPPEQEMDAQTDYYIDKPPDRLFVPKKNGIDKETQIW-EGDLFDFDQEVEPILQVLMN 177  Paramecium t...
A0EG05          66 EDETIHNEETQT-DPNVEELTDKPPRHLKETQTEFIIEKVVPRLYMKEKTGIDEETQVWdDGELFNFEYEAEPILQVLVR 144  Paramecium t...
24_pfamImport   59 PLPGRQNVEIMT-DEYVETLTDKPPNYEKDTQTEFIIPKPNPILIMPCKTGLDRETQIW-DGDLFDFDYEVEPLLQALIG 136 
XP_001022082    98 PVAGRQNIEVQT-DEFVEQLTDKPPEYEKDTQTEVFIDRPNPRLFMPKKTGIDQETQIW-DGDLFDFDYEVEPILQVLLG 175  Tetrahymena ...
XP_001323328    86 QKENRIDLEIQT-EPYLQEVVEKPVIVNQDTQTDEFLDRPETPPYIPPKNGIDIEIQVV-ESDLFDFDFEVKPIVATIVS 163  Trichomonas ...
XP_002784053    81 ATRKRQERNVQT-EEYYEKLTTIVREYDAETQTPFAYERPPSPLFMPVSSGNDAGTQIL-EGELFDFDKEVIPVLEVIVG 158  Perkinsus ma...
XP_002776754   744 PLPAHRHADVQSsQQCYEKLTEIVTEYDADTETSFPHERPPSPVFMPAYSGSDVATQIL-DGDFFDFDKEVVPVLEVIVG 822  Perkinsus ma...
XP_001705189    81 R-PSLPSIPVQT-APYLEAYPDKIEEAGACTQTDPMLEIKEPAPYVPPPQGIDVSTQIE-EGDLFDFDREVQPILDVLVG 157  Giardia lamb...
Q17LG5         280 RTIEQALIEVLHEEEIAEMKRQQQQIMAIREAELAELRRLEVEDRKIQAEKERRILQDKIAQDLDREMQERITASKLLQG 359  yellow fever...
7_pfamImport   122 KTLEQGLMEVMEEEELAAMRAHQEYFEQLRNAELVALQRMEAAEIRKMEEKMRRIAQEKERVEREKAMREKVAAQTFARG 201 
A0DT20         178 KILEQSRMEVLEEEEIKLMKHQQKQHEKQKTSVLSEMQRLEAVQQRLDQEEARRKLQYETFLKIQKQSHQKIVCRNLSKS 257  Paramecium t...
A0EG05         145 KTLDLSRMEVLQEEELREMKEKQEHYQKLKQMEMAEQDRLEKKEQQLYNENIKLKQQFHNQKQRDIKTHEKLVSRASAKK 224  Paramecium t...
24_pfamImport  137 KTLEFSRMEVLEEEELRVMKNEQKKFTELRNKEQDEVRQLEEKEKRLLEENTKRKNDYKQKLKQNILAHQQILSRNLAKK 216 
XP_001022082   176 KTLEQSRMEVLEEEELRVMKEQQKRFEQLRNAELAEMQRLEAKEKRLYEESERRKLQYKKQKEQNVLSHKKLISRNIAKQ 255  Tetrahymena ...
XP_001323328   164 KTLEQAFLEVHEEEELIAIRRHKEAIEHNRNVELADVQRLEEAEKRKFEEKQHRLEEREKIEREQKELREKIAARGYAEF 243  Trichomonas ...
XP_002784053   159 RTIEKALMEVLEEEELKAIEKRQAEFAALRHAELLEAQRMEGVEKRRSDEKERRKTQEKMRVTKEGVLRLKVLSRQLSKH 238  Perkinsus ma...
XP_002776754   823 RTIERALMEVLEEEEVEAIQKRQAGFQALRHAELLEAQRMEGVEKRRSYERERRRTQEHMRITTEGVLRRKLLSRQLAKH 902  Perkinsus ma...
XP_001705189   158 SVLQQALREFSDEEELRLIRIARDKVRQRRAAELQEVRRLEEAERRRRAEIVKRQVEDLRRKELEEAVARKMAAQTFATA 237  Giardia lamb...
Q17LG5         360 RIDDLLPDVLEAVENIKDDKDRE--EFERQITPWLAKEVAQEIGQMIDSKELLDDIIREVLIQK 421  yellow fever mosquito
7_pfamImport   202 YLNGLMGNVFDRLYDSGFFYDPVqrEVEQEFMPWFTDAVVDDCSNAAVTRRCVNDIIAKALKDM 265 
A0DT20         258 LINPLKQNTIKKLQDLGVFRDPLetALLYEYIPWVYENVLSQLVDENDNASNFNNILNNMEETI 321  Paramecium tetraurelia
A0EG05         225 YLSKCVNLALQQLELSGYFRDPVeiQLISEYLPWIYQDVTTELLSSNHIFVEYNSMLDNIDDDM 288  Paramecium tetraurelia
24_pfamImport  217 YLLQIKKNTLQDLQNQNIFYDPVknALFEDILPWFYTNVEQILNTEQKIDKSFELICTEIVENT 280 
XP_001022082   256 YLSKLRGNVVNMLEDQGVFRNPLqmSLYDQFLPWLYQNVQQELIQQHNIETELENLCVELIEEN 319  Tetrahymena thermophila SB210
XP_001323328   244 FASDLISSAITTLERRGFFYDEVerDIETNFMPWLAKAMLESGETRDLQEAIVDQVNNETIRve 307  Trichomonas vaginalis G3
XP_002784053   239 VVAEVEADVFRKLQELGKFDEPQliDVETRVLPNMMSRVAEEVALRDVSTRLVAELIHAACAQR 302  Perkinsus marinus ATCC 50983
XP_002776754   903 FVAQLEADVLRRLGRLGRFDDPQliDVQTKILPNVTSGAIEMTSLRHACTHVAAELIEAACTDR 966  Perkinsus marinus ATCC 50983
XP_001705189   238 YAAELEKDAVDSIETRGGFISPLeaAVTGSFVPYIVSTSITKAKARGRIHSILRCIIEEAVRTg 301  Giardia lamblia ATCC 50803
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap