Conserved Protein Domain Family
APG9

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pfam04109: APG9 (this model, PSSM-Id:309294 is obsolete and has been replaced by 461177)
Autophagy protein Apg9
In yeast, 15 Apg proteins coordinate the formation of autophagosomes. Autophagy is a bulk degradation process induced by starvation in eukaryotic cells. Apg9 plays a direct role in the formation of the cytoplasm to vacuole targeting and autophagic vesicles, possibly serving as a marker for a specialized compartment essential for these vesicle-mediated alternative targeting pathways.
Statistics
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PSSM-Id: 309294
Aligned: 123 rows
Threshold Bit Score: 260.851
Created: 19-Jul-2016
Updated: 4-Aug-2016
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q4WLT9        330 DIQTISWQEIVSRLM-TLRDANPATAgavsarhrkfmgsqSKQRMDAHDIANRLMRKENYLIALI-NKDILDLTLPIPFL 407  Aspergillus f...
Q4E4K7        174 FIGDLSWGSFLDLVCeRIQKdraf-------------gvvAYKEFDSLRAVQALMVYDNYFIALH-QHGILERGT----- 234  Trypanosoma c...
CCD79082      165 gLADLTWSEVQQRLL-QSQCDFQF-Cs-------------YKVNLDELDIYNRILRHKNYLIAMI-NQDIIPVRFRIPSS 228  Schistosoma m...
CDS33091      161 ELNDLTWSDVLKCLI-NVQTQMHL-Cq-------------SNKILDQLDIYNRILRRENYVLAMF-NRDVFPYRFHAPFF 224  Hymenolepis m...
EUB63575      161 ELNDLTWSEVLRRLL-SVQAQMPIw---------------RTKVLDELDVYNRILRQTNYLIGMV-NREVIPFRFHLPMV 223  Echinococcus ...
CBY07845      187 kLEHLSWLQIQEKLL-DAQKLNQ-MCi-------------HKEELTELDVHNRILRYKNYMIAMI-DRQILPLQCRVPIF 250  Oikopleura di...
XP_002681988  214 DIQTIQWVEVVEKII-EFQNKKKINIi-------------KNV--DEFDILNRIMRKENYLISFI-NKDVMNLTLP---F 273  Naegleria gru...
GAA27665      155 gLGDMTWSDVQKRLI-TRMPQ--------------------TEKLDELAVYNRILRHENYLVVMI-NRKILPVHFSIPLF 212  Clonorchis si...
XP_001326686  119 DLIVIEWNEVVESII-V--------Cd-------------PLKSISTLSIAQQITREDNYLGGMVeDQSVFTWRLPWKKE 176  Trichomonas v...
XP_001582125  119 DLYVLDWIEILDAIA-Q--------Kd-------------STVRISSLEIAQEILRMENYITAFVtDPELLTWKLPYMNQ 176  Trichomonas v...
Q4WLT9        408 R---N--KQLFSRTLEWNINLCIMD---YV--FN------EQG-Q-------VRTLFLKDthrkalSEGLRRRFIFAGIM 463  Aspergillus f...
Q4E4K7        235 -----------LKYVDNDLLKILIC---GL--FD------E---------------FNTLktgknqVSLVRWQVLKYLAF 277  Trypanosoma c...
CCD79082      229 L---NpqMVYLPDGYLLNLKLILFWtpwSP--FH------NYW-Q-------LRADYKWVtkrhelAVELATRIRILGLI 289  Schistosoma m...
CDS33091      225 Sl--P--YVYLPRYYLFLLEQLLFG---YKspFE------TYW-Q-------LKPEYKFLgkrielADEFALHSRILGAV 283  Hymenolepis m...
EUB63575      224 S---Np-YIYLPHYYLLNLKFLLFLgpkSP--FA------SYS-Q-------LRPEYKFLtrrlelAAEMAKHSRIIGLI 283  Echinococcus ...
CBY07845      251 G---E--LTFFTESLRINLEWLLFG---KH--LNnpwapfSSF-Q-------LKPQYKRRacrderAQDLSKRILILGVI 312  Oikopleura di...
XP_002681988  274 S---Q--KTYLSEIIVYNLR-IVVD---NM--FD------SEF-K-------INEAFVKN------PNALRAFFVKLGLI 322  Naegleria gru...
GAA27665      213 SppwN--YPYLPDGYLFNIKMLL---------FW------TPW-SpfshgsrLQPEYRDPtrqqelAAHLSKMSCVLGLL 274  Clonorchis si...
XP_001326686  177 M---E--QLPMNSSFFYFLKMSLQG---TI--FN------SDGvP-------LICGVQ-NiqaaqnQQKLKSRFRIVGVL 232  Trichomonas v...
XP_001582125  177 A---C--HFPMTRFFFYIFQISLNG---TV--MD------STGaS-------IVSDVPDIrlp-qvRDSLSKRFKVIGFI 232  Trichomonas v...
Q4WLT9        464 NIFVAPFIVVYFMMHYFFRYFNEYKKNPSQIGSRQYTPLAEWKFREFNELWHLFERRINMSYPFASRYVDQF--PKDKTV 541  Aspergillus f...
Q4E4K7        278 YVLLYPFVVTLSLLRVLVKNAAVMRSDWGNYMTRDWSNHAQWTFRLYNEVPHILSARLSMGRMIAVDMVLKLqsYSS--- 354  Trypanosoma c...
CCD79082      290 NLLMAPVIFIAQLVTFICAHAERFRYQPSTFFGRRWSNYARLYLRHFNELQHEFETRLKQAYIPASRYLDSF--VSRPLT 367  Schistosoma m...
CDS33091      284 CLVLSPIVFLVQILLFLFSNSQRLRFDPAQLAGRTWSNYARLYLRHFNELPHELNLRLNAAYKTASEYLDCF--QSRFLS 361  Hymenolepis m...
EUB63575      284 GLILSPLVFLIQILLFLFSNAQRLRYQPAQLFYRSWSNYARLYLRHFNELPHEFDMRLNQAYKPATEYLDCF--QSRLLS 361  Echinococcus ...
CBY07845      313 NLLAMPVVFIFQFMWTFFNYLAVVKREPGFLGMRKWSLYSTFALRHYNELNHQFKERLSRAIKPSNRFMESF--VSYSLV 390  Oikopleura di...
XP_002681988  323 NLLLAPFLLIYIILYTSFKYLAELKNDPKKALGRRWSLYSTFKFREYHELAHEYERRLKEGYGPSIDYLNQF--PNVLLS 400  Naegleria gru...
GAA27665      275 NLIFAPIILIAQALVFLCSNAQRIRFHPASVFGRRWSNYAHLYLRSVNELQHEFTVRIGQAYDSAAKYLDCF--VSRNLV 352  Clonorchis si...
XP_001326686  233 MILIAPFALIYEILNTIFAYIESIRASPDDLSLRQLSPIVRFKAREFNELPHTFDKRVMKSYEWADLYLDQF--NQSPLV 310  Trichomonas v...
XP_001582125  233 LFLISPFYLAFQALYLIFHYFQSVKSSPSSLSMRRWSPEAKWAIREYNELPHLFNERLQRADYFSNLYIEQF--PPDAMQ 310  Trichomonas v...
Q4WLT9        542 QVAGFVAFVSGALASVLALASIV-DP-ELFLGFEItHDRTVLFYLGVFGSVWAVARGLVPEETTV-FDPEYALLEVINYT 618  Aspergillus f...
Q4E4K7        355 -TERFIRRTASTIVFVTVVLSFL-NA-PLFISGSV-GGIPFVWWLSIALVAFTICAEKVPVQRE--YNYQADLNRLILQL 428  Trypanosoma c...
CCD79082      368 VLAESGAFIFGGASVAFFIAGLV-SE-QM-----I-HLPGYLAILVGGGLLARLCLSLIPDENVV-YCPRNLLVSTLMRI 438  Schistosoma m...
CDS33091      362 TLASHLIFTLGGLSLLMFCAGAI-KE-EFL---HL-PG--YLAVMAFGGLVVKVVMGLIPSEDVY-HVPRFPLSSTLAII 432  Hymenolepis m...
EUB63575      362 VTASHLAFTFGGLSILLFVISLF-RE-GL-----I-HLTGYLAAMAVGGLIANVCANFTPTEDAI-RFPRASLLATLAKI 432  Echinococcus ...
CBY07845      391 EVAKLISFLCSAVLGVFILLGIV-DD-DFF------RVEHALSIMTLLGILLGVTLSLIPDDFFV-PLHFELLSLIRDHV 461  Oikopleura di...
XP_002681988  401 IVANRAMFFISAIAGVIIVLSYL-NN-SLTLYLTV-FNQNLLTWLTTLLLGWAFAKGFVIDEHAV-FNPKQKLDDVCEIL 476  Naegleria gru...
GAA27665      353 TLADAAAFILGSASVAFFVLGLV-HE-QMM------HLSGYWAILVVGGLVARICISYIPDEQVV-QSPEVLLRVTLSKI 423  Clonorchis si...
XP_001326686  311 PVMRTFSFLAGSIIAIVFFVGIIsDI-PKVLGLEIfGGKTIAWLITILASVYAACKPPRPPTNMYgLGPDELFVELQKHI 389  Trichomonas v...
XP_001582125  311 TVYKTVCFLCGSFIAYFIFIGLF-SDvSIVFGALI-GQKSIVWVMALLATIYSIFNGLIKKKKKS-KDSLELYEEIRKFI 387  Trichomonas v...
Q4WLT9        619 HYAPSHW--KGRLHSDEVRREFTELYQMKIVIFLEEILSMIFTPFILWFNLP-KCSDRLIDFFREFTVHVDGMGYLCSFA 695  Aspergillus f...
Q4E4K7        429 HYWKDEWfySGEKFYTALTRDF---LKSRFFVIIEDLAHTFFMPIILLGVLFdGSISELVDVVFNESVSVDGLGSVSKGS 505  Trypanosoma c...
CCD79082      439 HYMPDHW--KEQAGTHQVRSEFSQLFQYRMVGLLEELFSPVITPLILIFILP-NHTLEVVDFLRNYTVEVPGVGDVCSFA 515  Schistosoma m...
CDS33091      433 HYMPDKW--LNNAHTSQVRAEFSQLFQYRFVAAIEEILSPFIVPIILLFGIP-KRSLDIVDFLRNCTVEIDGVGDICSYA 509  Hymenolepis m...
EUB63575      433 HYMPDSW--KDNPHAHNVRSEFSQLFQFRAVGAVEEILSPILVPLIMLFYMP-HRGLDIVDFLRNFTTELDGVGDVCSFA 509  Echinococcus ...
CBY07845      462 HYISNDM--IADPKSPATQKKFSTLFQMKLAYIIEELISPIVSPLFLIFKLR-HRAPEIVDFLRQNTVEVQGVGDICKFA 538  Oikopleura di...
XP_002681988  477 HHHDLKW--KGKGHHHDVRDDFVAHFIPSYSYFLNEIVSVFVTPIILIISLP-RSAERISSFVDQITVDYHGLGHICGHA 553  Naegleria gru...
GAA27665      424 HHSNDQW--IKNAATSRVYTEFSHLFHYRIVGALEDILSPILTPFLLLFFLP-NHTAEIVSFFRNYTVDLGELGHVCSLA 500  Clonorchis si...
XP_001326686  390 HLDLSDS--RNSPHSWETYDNVDRAYPPIWKHALINIASVIINPFLFIAILP-LKASSIVEFVRRNSVENSEIGWICALG 466  Trichomonas v...
XP_001582125  388 HYDFTDE--NHNALSWEAQSKFTEFFQPLWLHIVIELCGCIINPVVFTFVLP-LHSEKIIDFVRKNSVRNENIGCICRFS 464  Trichomonas v...
Q4WLT9        696 VFDFKK 701  Aspergillus fumigatus Af293
Q4E4K7        506 AFELLC 511  Trypanosoma cruzi
CCD79082      516 QLDIRR 521  Schistosoma mansoni
CDS33091      510 QLELSR 515  Hymenolepis microstoma
EUB63575      510 QLDIPR 515  Echinococcus granulosus
CBY07845      539 LMENRR 544  Oikopleura dioica
XP_002681988  554 AFKFNE 559  Naegleria gruberi strain NEG-M
GAA27665      501 TLDVgl 506  Clonorchis sinensis
XP_001326686  467 AFEdpq 472  Trichomonas vaginalis G3
XP_001582125  465 NFEdvi 470  Trichomonas vaginalis G3
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