Conserved Protein Domain Family
KCNQ_channel

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pfam03520: KCNQ_channel (this model, PSSM-Id:308886 is obsolete and has been replaced by 460954)
KCNQ voltage-gated potassium channel
This family matches to the C-terminal tail of KCNQ type potassium channels.
Statistics
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PSSM-Id: 308886
Aligned: 11 rows
Threshold Bit Score: 334.048
Created: 16-Jul-2016
Updated: 4-Aug-2016
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q9JK97       465 SPSSEQVGEAsSPSKVQKSWSFNDRTR-FRASLRLK---PRCSAE---EGPSEEVAEE-KSYQCELTVDDVMPAVKTVIR 536  house mouse
Q0P4Q9       368 SPGTEPAAETpSPTKVQKSWSFNDRTR-FRASLRLK---SRPQAD---EGPGDDINDE-KRLPNDLTMEDVMPTIKTLIR 439  tropical clawe...
XP_013000069 436 SPSADQSLED-SPSKVPKSWSFGDRSR-ARQAFRIKgaaSRQNSEe-aSLPGEDVVEDnKSCNCEFVTEDLTPGLKVSIR 512  domestic guine...
KTF86326      21 SPGAEISTDGsSPAKVQKSWSFNDRTR-FRPSLRLKs-qSRSTPEgeaNAGMDEAFDE-KGCHCDMSAEDLPPALKTIIR 97   common carp
XP_008578285  21 SPSTDITAEG-SPTKVQKSWSFNDRTR-FRPSLRLKssqPKPVIDadtALGTDDVYDE-KGCQCDVSVEDLTPPLKTVIR 97   Sunda flying l...
CAG01696     509 SPGAEDGVET-SPYKVAKSWSFNEKNRgAKNSLKARgssSRQNSEe-aSLPGEEVGDD-KSCHCDFLTQELPSSLKVTIR 585  spotted green ...
XP_003449190 430 PGGADDGAEA-SPSKVTKSSSFTDKNRgAKNAFKARgsiSRKNSEe-aSLPGEEIGDD-KSCHCEFLTQELPPGLKVAIR 506  Nile tilapia
EDM16164      53 TPLNVDAIEE-SPSKEPKPVGLNNKER-FRTAFRMKayaFWQSSEd--aGTGDPMTED-RGYGNDFLIEDMIPTLKAAIR 127  Norway rat
XP_016851815 408 SPSTENINEAaSPTKVQKSWSFNDRTR-FRASLRLK---PRIPVEa--DGPVEESSEE-KAYQCDLTFEDIMPAVKTLIR 480  green anole
XP_015203979 482 SPSSESVPEAtSPGRVQKSWSFNDRTR-FRTSLRLK---PRPSADv--EAPAEDGAED-KAPHCDVTMEEVIPAVKTLIR 554  spotted gar
XP_005457717 427 LTGNADSIEE-SPSKEPKPAGFTNRER-FRTAFRMKantLRQSSEd-aGGVADPALEE-RGFPPDILLEEMIPTLKLVIR 502  Nile tilapia
Q9JK97       537 SVRILKFLVAKRKFKETLRPYDVKDVIEQYSAGHLDMLGRIKSLQAR---------VDQIVGRGP--GDRKTR-EKGDk- 603  house mouse
Q0P4Q9       440 AFRILKFLVAKRKFKETLRPYDVKDVIEQYSAGHLDMLGRIKSLQGR---------VDQIIGRGPvpVEKKPR-DKGEkv 509  tropical clawe...
XP_013000069 513 AVCVMRFLVSKRKFKESLRPYDVMDVIEQYSAGHLDMLSRIKSLQSR---------VDQIVGRGPaiTDKD-R-TKGPa- 580  domestic guine...
KTF86326      98 AVRIMKFHVAKKKFKETLRPYDVKDVIEQYSAGHLDMLCRIKSLQTR---------VDQILGRGQmpVDKKVR-EKLLs- 166  common carp
XP_008578285  98 AIRIMKFHVAKRKFKETLRPYDVKDVIEQYSAGHLDMLCRIKSLQTR---------VDQILGKGQitSDKKSR-EKITa- 166  Sunda flying l...
CAG01696     586 AVCIMKFLVSKRKFKESLRPYDVMDVIEQYSAGHLDMLCRIKNLQTRqvhhtatvkVDQIVG-------------KNPk- 651  spotted green ...
XP_003449190 507 AICIMSFLVSKRRFKESLRPYDVMDVIEQYSAGHLDMLSRIKNLQTR---------VDQIVGKGP----------KG--- 564  Nile tilapia
EDM16164     128 AVRILQFRLYKKKFKETLRPYDVKDVIEQYSAGHLDMLSRIKYLQTR---------IDMIFTPGPpsTPKHKKsQKGSaf 198  Norway rat
XP_016851815 481 AVRILKFLVAKRKFKETLRPYDVKDVIEQYSAGHLDMLCRIKSLQTR---------VDQIVGRGAiaIDKKVR-EKGEk- 549  green anole
XP_015203979 555 AVRILKFLVAKRKFKETLRPYDVKDVIEQYSAGHLDMLGRIKSLQTR---------VDQIVGRGAiqPDRKVRsEKGEk- 624  spotted gar
XP_005457717 503 AVRIMQFLLNKKRFKETLRPYDVKDVIEQYSAGHLDMLCRIKYLQTR---------IDMILAPGPplTPKHKKtQKTPft 573  Nile tilapia
Q9JK97       604 ---------------GPsDTEAVDEISMMGRVVKVEKQVQSIEHKLDLLLGFYSRCLRSG 648  house mouse
Q0P4Q9       510 -------------stMGpEVEAADELSMMGRVVKVERQVQSIEDKLDILLGFYSQCIRKG 556  tropical clawed frog
XP_013000069 581 ------------------EAELPEDPSMMGRLGKVEKQVLSMEKKLDFLVNIYMQRMGIP 622  domestic guinea pig
KTF86326     167 ------------------DGDILEDVSMLGRVCKVERQVQSIEAKLDSLLDIYRQVLQKG 208  common carp
XP_008578285 167 ------------------EHETTDDLSMLGRVVKVEKQVQSIESKLDCLLDIYQQVLRKG 208  Sunda flying lemur
CAG01696     652 ------------------DGEAGDDLSMMGRLVKVEKQVLCMDRKLDFLVNVYVQRMGIT 693  spotted green pufferfish
XP_003449190 565 ------------------EGDAVEDQSMMGRLVKVEKQVVCMDRKLDFLVNVYVQRMGIP 606  Nile tilapia
EDM16164     199 typsqqsprnepyvaRA-ATSETEDQSMMGKFVKVERQVHDMGKKLDFLVDMHMQHMERL 257  Norway rat
XP_016851815 550 ---------------SSlEMELVDELSMLGRVVKVEKQVQSIEHKLDLLLGVYSQCLRKG 594  green anole
XP_015203979 625 ---------------TPpELDPLDELSMMGRVVKVEKQVQSIEHKLDLLLNFYTQCLKKG 669  spotted gar
XP_005457717 574 yppnqs-prhesyiaKAtSMPDAEDQSMMGRFVRVERQVEDMEKKLDFLVDMHIQHTEHL 632  Nile tilapia
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