Conserved Protein Domain Family
Exonuc_VII_L

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pfam02601: Exonuc_VII_L (this model, PSSM-Id:308296 is obsolete and has been replaced by 426865)
Exonuclease VII, large subunit
This family consist of exonuclease VII, large subunit EC:3.1.11.6 This enzyme catalyzes exonucleolytic cleavage in either 5'->3' or 3'->5' direction to yield 5'-phosphomononucleotides. This exonuclease VII enzyme is composed of one large subunit and 4 small ones.
Statistics
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PSSM-Id: 308296
Aligned: 558 rows
Threshold Bit Score: 176.106
Created: 25-Jul-2016
Updated: 4-Aug-2016
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q21PB7         141 INRNRYLDKPKDFCRVAVVSPESAAGLGDFKTiaDRLEKYNLCKFNYYPSLFQGANAVASIVSAIsqvvvd-iengnQYD 219 Saccharophagu...
26_pfamImport    1 -------ELPPI-KKIAVISSKTAAGYEDFLKnlKVGYLYQ-PIVHLYESPMQGANTAAGIILALerikr----snidYN 67 
30_pfamImport    2 EVLHNLDELEPI-KYIAVITSKTAQGYFDFLSniLVPDELR-PVIHLYESSMQGATTAEEVISALnrietfcrefmvkYD 79 
34_pfamImport    1 ---HELIELDPI-KKIAVITSPTAAGFGDFQKniNHSRFIP--IVHLYPAPMQGAETVPGIKKALfailk----sgidYD 70 
221_pfamImport   1 ---NNTLEMLPPIKKIAVISSETAAGYGDFVKniNKTKYPP--LIHLYPSPMQGVEVPVGIISALknilk----skidYD 71 
49_pfamImport    2 FETNKERFVPILPIRLGLITSSGSAAYNDFIQtlTASGYGF--KIYLADAMVQGDQTEKSVLRALdalt------gldVD 73 
4_pfamImport     2 FQPNKECFVPLLPQNIGLISSFGSAAYNDFIQtlTTSMFGF--KIHMADAMMQGEQTEKSVLRAMdalc------klgVE 73 
35_pfamImport    2 LDRNRSLPFPALPLRVGLVTSLGSDAYNDVLG--TFRESGFAFRVVAHGVRVQGRQTEPSVLNALdyfr----araaELD 75 
93_pfamImport    2 LEKNKQLELADVPLRVGLITGENTAAYKDFTTrlEASP--FAFEVTTIYARMQGNETEDSIIAALeqlq-----sdsnLD 74 
273_pfamImport   2 IDLNKQWPLSPIPLRIGVATSLDSAAWADFHH--EIEKSGFGFHLTVADTRVQGDGAERMVAGAIgtlar--garkgVLD 77 
Q21PB7         220 ALAIVRGGGDKAGLYQLNEIKIARCICRS---PIPVLVGIGHERDSTILDEVANCRLATPSLVASFIQ----------EA 286 Saccharophagu...
26_pfamImport   68 VVVIARGGGAKSDLMYFDDLALGVEIANFn-nYCPVLSGIGHERDFTIPDYVAWKRFATPTEVARAISrq------idDN 140
30_pfamImport   80 VIVIIRGGGGPSDLMYFDDYNLARRIAQMn-nFIPVLTGIGHEKDETIPDFVAWRRFPTPTAVAKEISnqik---gyqDK 155
34_pfamImport   71 VVVIIRGGGSKSDLMYFDDFELGSLIAKFn-rKIPVLTGIGHEQDSTIPDFVSWKNYSTPTEVSRDIVnqinyftdnlET 149
221_pfamImport  72 LVVIIRGGGSQADLMYFDDFNLAQHIAYFsnnKIPIVTGIGHEQDTTILDFVSYIRFSTPTEVARAINnq-------iEF 144
49_pfamImport   74 LVLILRGGGSKTDLYFLDNEAISRKIAGY---PKPVWTGIGHEIDTSILDYIANRSFKTPTAAAEELV----------AR 140
4_pfamImport    74 LIVIARGGGSKTDLYFLDNEAVARKIAAC---TIPVWTGIGHEIDTSVLDYVANKSFKTPTAVAEELV----------AR 140
35_pfamImport   76 VLLICRGGGSRTDLAWFDSEPIARAVATF---PLPVVVGIGHERDISALDFVGFRE-KTPTAAAAMLV----------QR 141
93_pfamImport   75 VVCIVRGGGAKTDLNFFDSEALCRAVANY---PTPVFTGIGHEIDRCLLDEVAYLSCITPTDCAKRLV----------ER 141
273_pfamImport  78 AIVVIRGGGARNELAVFDTEIIARTIAAV---PVPVFTGIGHEIDRSIADEAAHTALKTPTACAGALI----------DR 144
Q21PB7         287 IvknardakfnyellvrssqsissfaKQELRDYRA-----------------------------NISL-------LSHK- 329 Saccharophagu...
26_pfamImport  141 V--------------------------RQIDDNWN-----------------------------DLKLlmmnilkNISTl 165
30_pfamImport  156 V-------------------------ERNVSDLSR-----------------------------YMEN-------AI-El 173
34_pfamImport  150 L-------------------------EKNITYSFT-----------------------------NVYY-------QMENl 168
221_pfamImport 145 F-------------------------HQTLHEKFQ-----------------------------NIIY-------EINS- 162
49_pfamImport  141 Fvq----------------------mRRQLDEATNtlktvwayrlkidqdylaravtgiqqgprKLLD-------VTAS- 190
4_pfamImport   141 Fiq----------------------mQRQLEEASNtlqtvwayrfkidreyldraiigihqgprKLLE-------VTVS- 190
35_pfamImport  142 Vs-----------------------------dARD-----------------------------EVES-------SLLS- 155
93_pfamImport  142 Vtd----------------------sWNRMTEAMA-----------------------------SIAD-------GARD- 162
273_pfamImport 145 Vsn----------------------fVANTEMAWQ-----------------------------AIER-------RATA- 165
Q21PB7         330 ---------------KLesarrqvtehntslthvpnlliQNAK--RQneenyiniklfsgrsiqqakelvsesfrsaind 392 Saccharophagu...
26_pfamImport  166 lntqlvdyinktlkvTFlgyedlfenyyenlknhlnyifEFSS--RK--------------------------------- 210
30_pfamImport  174 lnaklsdtnyktvkeIFrgkiqsveeelidsaevlykrfSLKEyeKM--------------------------------- 220
34_pfamImport  169 lsfntinnikyylsrELinlfrtldedhlnitrkvnqmiESSEksIS--------------------------------- 215
221_pfamImport 163 ---------------NFttteiklknlsenlsiyfnnitKNQEnyLKemsnkinninkffemnekalnsrldfinlisnh 227
49_pfamImport  191 ---------------CLreqaqelrarvqrrlsteqigiGRRR--EK--------------------------------- 220
4_pfamImport   191 ---------------NLreqaqdlrhlvserlstehiqlESKR--SQ--------------------------------- 220
35_pfamImport  156 ---------------ILdqg------------------------rrV--------------------------------- 163
93_pfamImport  163 ---------------LLten------------------------nkQ--------------------------------- 170
273_pfamImport 166 ---------------TLdaa------------------------erR--------------------------------- 173
Q21PB7         393 tkvnirsigshIQqlkid--------------------------------------virraHH--STSTA-KSS------ 425 Saccharophagu...
26_pfamImport  211 -----------IS------------------------------------------------ED--FLSFI-SQR------ 222
30_pfamImport  221 -----------ISmdfi-----------------------------------------knlSE--KMKYD-ISEfskklm 245
34_pfamImport  216 -----------LN----------------------------------------------------KLDYI-QRF------ 225
221_pfamImport 228 innklinfssvIN------------------------------------------------NEknLIQKNmENK------ 253
49_pfamImport  221 -----------LRslpltltknhmerlaakrqelssgvthcltrtgetlsglkqrfekerfLR--RLAVE-RER------ 280
4_pfamImport   221 -----------LKslplaviqkqierlsskkqnigtqvkfalsgwtgtmsrlkgrfdknryIK--RLQVE-SDA------ 280
35_pfamImport  164 -----------LRsassdltrr-------------------------------aarvprsaSL--LIARR-AGQ------ 192
93_pfamImport  171 -----------LGtmgnq--------------------------------------lqqkvFG--LIQNE-KSK------ 192
273_pfamImport 174 -----------Lgdvghri----------------------------------------aartqsaIDRS-NER------ 195
Q21PB7         426 ---------VQHyniQMRQgasnsahqakssvlykyeeslkatkyylgQQRNAIENESkslrv------naaqsLTAIKS 490 Saccharophagu...
26_pfamImport  223 ---------MEG---NLNA-----------------------------KKGELIGYAKliek---------dfaLKISNK 252
30_pfamImport  246 ldykylkdtLEL---KINN-----------------------------INQQVERYTK----------------LSDTLE 277
34_pfamImport  226 ---------IEY---SIKT-----------------------------YNQNIISTTNeivs--------elksKFEVSE 256
221_pfamImport 254 ---------LNM---SFQRid----------------------------------------------------------- 262
49_pfamImport  281 ---------NEKnrqQLKArffs----------------------vfkMKYMLLTNIKgrlkqervlqrialarTSLNDK 329
4_pfamImport   281 ---------HDKssqQLLSrfta----------------------avkLLTMQQWNRKerfrvekvkqrimverKSLNDK 329
35_pfamImport  193 ---------LQEavrQLRQgarr----------------------dldAASHRVDEMAsllgp------rssrrLALESE 235
93_pfamImport  193 ---------HVLiaaSIKKdtaf----------------------yikSEHERLNRNQeglkq------gsrkiLDLAKS 235
273_pfamImport 196 ---------LDMrldVLGTvapa----------------------vleRAHDRLDTAAerlie------rsslrVERETG 238
Q21PB7         491 Dik--iLVERVLLL------------DP-SKILAKGFALIMSnEKKVLTTKKDVLKQKNVSLRLKDGFVEAH 547 Saccharophagus degrad...
26_pfamImport  253 EallnqIFQELLKK------------EE-LAPLLFGGAIVMK-GRKKISSVRKLRMGEKIEIYLKDGKINAK 310
30_pfamImport  278 K-----EYSNLSNLveekkeefvkigGP-LSALSFGGAVVLK-GRKIIQSKKELSTGENVIINFIDGKAQAT 342
34_pfamImport  257 Rll-fsTFQELTKS------------SPfAAFLNNGVLVKK--GEEIIDSVEKLQTKDEVKLIFKDGEAESS 313
221_pfamImport 263 -----eLYIKITQN------------SPfSAFLSNGAIVIQ--NGEIVNTIKNLKI-DPVEIKFKDGEAKG- 313
49_pfamImport  330 Ma-------tLKAI------------DP-QTVLKRGFALVYSqQGTLVRSIADVAEKQLIQTRLADGSLISE 381
4_pfamImport   330 Ma-------tIRAT------------DP-QNALQRGFALVYRqDGQLIRSIHDINKSDTIRTHVVDGTVISE 381
35_pfamImport  236 Rle--sRERRLRLL------------DP-RRVVERGYAILRTtEGAVLTDAARAPQGTTLIAELKRGVL--- 289
93_pfamImport  236 Qfe--lVSEKVKNA------------DP-KTTLAKGYSLTLDeNGKFIRKASQLKSGDTIKTRLADGDVL-- 290
273_pfamImport 239 Rld--lLAARVAAV------------DP-AVQLARGWSITRTaSGQIVRSADDVATGDTLTTALLDGEITS- 294
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