Conserved Protein Domain Family
zf-C2H2_assoc3

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pfam16637: zf-C2H2_assoc3 (this model, PSSM-Id:293243 is obsolete and has been replaced by 465210)
Putative zinc-finger between two C2H2 zinc-fingers on Patz
zf-C2H2_assoc3 is a partially unstructured region on Patz or POZ-, AT hook-, and zinc finger-containing proteins of higher eukaryotes. It lies between the two C2H2-type zinc-fingers towards the C-terminus of these proteins and may well be an unusual zinc-finger itself.
Statistics
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PSSM-Id: 293243
Aligned: 10 rows
Threshold Bit Score: 96.8885
Created: 1-Jul-2015
Updated: 5-Aug-2015
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_010773380 532 GTPYLMGrqCSVEDGQE---------------------------------------------------NTGKCPHLESEE 560 black rockcod
XP_003973360 477 GTHNYCG--ICNKDGQE---------------------------------------------------NTGKCPHLESEE 503 torafugu
XP_011612194 525 GNPFHMGrqCLVEDGQE---------------------------------------------------NTGKCPHLESEE 553 torafugu
XP_001232642 539 GAAFHCVrtYGIKEGQ-------------------------------------------------------KCSHSDPIE 563 chicken
XP_003448462 485 GTHNYCG--ICNKDGQE---------------------------------------------------NAGKCPHLESEE 511 Nile tilapia
XP_005987190 511 GAAFHSDrtY----GMS---------------------------------------------------DGEKCPHQEQHD 535 coelacanth
XP_011286056 493 GPSNFCS--ICNREGQ-------------------------------------------------------KCSHQDPIE 515 domestic cat
XP_004910654 494 AALFHCVrtCGVKEGD-------------------------------------------------------KC-HHGEQE 517 western clawed ...
ERE87866     536 GAAFHCArtYGNKGKRPlalhfaslrrlccggagpgggeariavlirtelpqddvdlrlnafslvdpvEGQKCSHQDLIE 615 Chinese hamster
XP_011471089 329 slifvsflsafasDGQE---------------------------------------------------DDRKCPHLDSEE 357 Japanese medaka
XP_010773380 561 SDPSFGELSNGDELKSPQKP----------DepelempslaCNGAS-TGALSSPEGSKAKTDPEKK 615 black rockcod
XP_003973360 504 SDPSFGELSNGEDLKSPQKP----------DgpelemqqlaCNGAP-GAPLGSPEGSKPKTDPEKK 558 torafugu
XP_011612194 554 SDPSFGELSNGEDLKSPQKP----------DgpelemqqlaCNGAP-GAPLGSPEGSKPKTDPEKK 608 torafugu
XP_001232642 564 SSDSYGDLSDTSDLKTPEKQ----------S----------TNGSF-SCDMAVS-KNKMETEAEKK 607 chicken
XP_003448462 512 SDPSFGDLSNSEELKSPHKT----------DgpelempslpCNGAS-AGALVSPEASKAKMDPEKK 566 Nile tilapia
XP_005987190 536 NSDSFGEFSDTSDLHSPTKQ----------N----------ENGPF-SCDPVVNPKSDRDLEAERK 580 coelacanth
XP_011286056 516 SSDSYGDLSDASDLKTPEKQ----------S----------TNGSF-SCDMAVP-KNKMESDGEKK 559 domestic cat
XP_004910654 518 SSDSYGDLSESSDLKSTEKQ----------N----------ANGSYtACDLVIP--KKTEAESEKR 561 western clawed frog
ERE87866     616 SSDSYGDLSDASDLKTPEKQ----------S----------ANGCF-SCDMAV-AKNKTESDGat- 658 Chinese hamster
XP_011471089 358 SDASFREMSNGDELKSPHKSdgpeqemsslD----------CNGAS-AELLASPDGSKSKAEPEKR 412 Japanese medaka
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