Conserved Protein Domain Family
Keratin_2_head

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pfam16208: Keratin_2_head (this model, PSSM-Id:292825 is obsolete and has been replaced by 318448)
Keratin type II head
Statistics
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PSSM-Id: 292825
View PSSM: pfam16208
Aligned: 45 rows
Threshold Bit Score: 41.6017
Threshold Setting Gi: 327264544
Created: 29-Jun-2015
Updated: 5-Aug-2015
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81891716   21 NFSSGSAGLV-SFQRRSTS--SSMRRSgG---GG-GgRFSgggFcGSSGGGFGSKSLVNLGGGRSISISVAGG------- 86
gi 831226850  16 NFSSCSAGSPqNLNHFRAGsvSCRSGSgF--------------RsLGSFGGFGSRSVVNFG---SYSPRMAAVgpcpvrc 78
gi 532078536  16 SFSSCSAVTPqNLSHFQASsvSCKSGPgL--------------RgL---GAFGSRSVINFG---SHAPRMAAVgphptrc 75
gi 301775731  16 NFSSCSAVNPqNLNRLRASsvSCRSGPsF--------------RgL---GNFGSRSVMAFG---SCSPRIAAVgprpirc 75
gi 350583957  16 NFSSCSAMTHqNLNRFRTSsvSCRSGPsF--------------RgL---GGFGSRSVISFG---SCSPRIAAVgprpirc 75
gi 586522376  16 NFSSCSAAAPqNLKCFRASsvSCRSGPsF--------------RgL---GGFGSRSVITYG---SCSPRTAAVcprpvrs 75
gi 332206141  16 NFSSCSAMTPqNLNRFQANsvSCWSRPgF--------------RgL---GSFGSRSVITFG---SYSPRIAAVgsqpvrc 75
gi 544469993  16 NFSSCSAMTPqNLNRFRANsvSCWSGPgF--------------RgL---GSFGSRSVITFG---SYSPRRAAVgprpgrc 75
gi 57012366   16 NFSSCSAMTPqHLNRFRASsvSCRSGPgF--------------RgL---GGFGSRSVINFG---SSSPRIAVGcsrpiry 75
gi 327264544   4 QFSSRSFST--GGRRGYSFpgSGFRVGnGstsLVpVgGVG------ASSGGFGSRSLHSLGGSKKISMGIVSG------- 68
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81891716   87 GSSy-GGGFGGGSYg-------GGSFG-GG---SF--GGGVG--GGFGGgg----------fGGGGFGSg-GGFGG--GR 137
gi 831226850  79 GAGfgAGSAMGLGF--------GGGSGvGL---GFraSSGVG--LACGAssg----------lgyGFGG--PGFGYrlGG 133
gi 532078536  76 GVGfgPGSRMAFSF--------GDRSGvGL---GFraCSGVG--LGFGGgsg----------fghGFSG--PGFGYrvGG 130
gi 301775731  76 GVGfgAGSGMAFGF--------GDGSGaGL---GFgpSSCVG--LGFGAgsg-----------------lgyGFGYrvGG 125
gi 350583957  76 GVGfgVGSGMAFGY--------GDGSGaGL---GFgsGSCVG--LGFGAgsg----------lgyGFGG--PGFGYrvGG 130
gi 586522376  76 GAGfgASSGMAFGF--------GAGCGaNL---GFgaGSGVG--LGFGAtsr----------lgyGFGG--PGFGYrvGG 130
gi 332206141  76 RVGfgAGCGMGF----------GDGRGvGL---GPraDSCVG--LGFGAgsg----------igyGFGG--PGFGYrvGG 128
gi 544469993  76 GVGfgAGCGMGF----------GDGRGvGL---GPgaGSCVG--LGFGAgsg----------igyGFGG--PGFGYrvGG 128
gi 57012366   76 GVGfgAGNGIAFGS--------GDGSGiCL---GYraGSGVG--LGFGAgsclgygfggpgfGGPGFGG--PGFGYriGG 140
gi 327264544  69 -----GGGSGGYFAggvggrnlGSGLGfSSfstGY---GGLGsgVGFGGgaclggg--valgsgvGQGGpaGGFGG--GG 136
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|
gi 81891716  138 FGgg-fGPV-CPPGGIQEVTINQSLLQPLNVEVDPQIQKV 175
gi 831226850 134 IG-----VP-AAPS-ITAVTVNQSLLTPLNLEIDPNAQRV 166
gi 532078536 131 IV-----GP-AAPS-ITAVTVNQSLLTPLNLEIDPNAQRV 163
gi 301775731 126 IG-----VP-AAPS-ITAVTVNQSLLTPLNLEIDPNAQRV 158
gi 350583957 131 IG-----VP-AAPS-ITAVTVNQSLLTPLNLEIDPNAQRV 163
gi 586522376 131 VG-----VS-ATPS-ITPVTVNQSLLTPLNLEIDPNAQRV 163
gi 332206141 129 FG-----VPxA-PS-ITAVTVNKSLLSPLNLEIDPNAHRV 161
gi 544469993 129 VG-----VP-AAPS-ITAVTVNKSLLTPLNLEIDPNAQRV 161
gi 57012366  141 IG-----GP-SAPA-ITAVTVNQSLLTPLNLEIDPNAQRV 173
gi 327264544 137 YGlsgpGPL-PAPGRIHNVVVNKNLLAPLRVEVDPDIQRV 175
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