Conserved Protein Domain Family
CAP-ZIP_m
?
pfam15255: CAP-ZIP_m (this model, PSSM-Id:291908 is obsolete and has been replaced by 464595)
WASH complex subunit CAP-Z interacting, central region
This domain is found on WASH complex subunits FAM21 and CAP-ZIP proteins, as well as on VPEF (vaccinia virus penetration factor). This family of proteins is found in eukaryotes. Proteins in this family are typically between 305 and 1321 amino acids in length. The exact function of this region is not known.
Links
?
Statistics
?
PSSM-Id: 291908
Aligned: 15 rows
Threshold Bit Score: 83.3567
Created: 16-Jul-2015
Updated: 5-Aug-2015
Structure
?
Aligned Rows:
Download Cn3D
PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection: 
Q5SNT6        861 EPSTRIGKIQANLAINPAALLPTAASQISEVKPVLPELAFPSSEH--RRSHGLESVPVLPGSGEAGVSFDLPAQADTLHS 938  human
Q80X08        937 EPSSRIGKIQANLAINPATLLPSVAPQIPGAKPASCELAFPSSEP--ARSHIREAVPTLPGSEEAGVSFDLPAQADTLHS 1014 Norway rat
NP_001012611  942 EPSSRIGKLQANLAINPAALLPGAVPKISNVKSPFPILDTPLHEP--NDVQSSEAFPAAGNNEELGVSFDQPMQADTLHS 1019 chicken
XP_012397696  866 EPSSRIGKLQADLAINPAALLPGAAPKISGVKAAVPGFAFTASEP--DGVKGMESASA----GETGVSFEDPAQADTLYS 939  Tasmanian devil
XP_012429910 1030 EPSSRIGKLQANLAINPSALLPGAMPKVSNVKSPLPVLDTPLHEP--KEAQNSEAFSAAGSNEELGVSFDQPIQADTLHN 1107 zebra finch
XP_006006971  917 EPSSRIGKLQVNLAINPAKLLPGAAPRALGAESVMPGSPTEATR-------STTSPSGAESSEEMGVNFDSPAQADTLHS 989  coelacanth
XP_008115938  828 lfnsseaKPLANLDINPTVFLPSGT---SGMKRFASYPKTPCYEP--HSIQHAKIASVVKGNNETGVSFDSPMQADTLQN 902  green anole
XP_007240344 1019 KETSRIGKLQANLAINPASLLPGAAPRVPGGVSVIPGLAPSHSARasGPLPGFAGPPEPQARSEGAVSFDTPAQVTTLQS 1098 Mexican tetra
XP_005156761 1001 KKTSRIGELQAVLALNPAGLLPGAVPRAPGAVSVIPGLAHTGLPA------AARTMPDHQGSSEGGVSFDSPALISTLLN 1074 zebrafish
XP_011601642 1010 ESSTRIGKLQASLTINPAALLPGAAPGRPGAVGLLPGTASKSSSG--VLSSVF-PPVGAQTGSEQGVSFDAPVQVSTLPS 1086 torafugu

Q5SNT6        939 ANKSRVKMRGKRRPQTRAARRLAAQESSET--EDMSVPRGPIAQWA-DGAISP 988  human
Q80X08       1015 ANKGRVKVRGKRRPQTRAARRLAAQESSEA--EDVTIDRGPVTQLS-SSPVLP 1064 Norway rat
NP_001012611 1020 ANKTRIKVTGKRRPPSRMARRLAAQESGES--EEVDSAKEPQFSVLkQKSVVe 1070 chicken
XP_012397696  940 VNKSRITMKGKRRPQTRAARRLAAQESSEA--EDRSDAEGS--QLGrEHVISP 988  Tasmanian devil
XP_012429910 1108 ANKTRIRVPGKRRPPSRMARRLAAQEAEAS--EEMDATKESQFSLPkQTSAVV 1158 zebra finch
XP_006006971  990 VNKSRAKMTGKRRPPTRVARHSAIQQSDEM--DKATQKEDRLAIQAsAAVgtk 1040 coelacanth
XP_008115938  903 TNKGRVKMSGKRRPPSRMARRIAAQESIDN--ETTGAEYPSPPLLKeNSVPSA 953  green anole
XP_007240344 1099 ANKDRAKVATKRRPQTRAARQIAAQRSVEAr-RDMEEVDSQGGTASsTPPFNP 1150 Mexican tetra
XP_005156761 1075 ANKGRAKGAGKRRPQTRAARHLAAQQSDEAsgENVSVQKNEPAMAAsLPPFNP 1127 zebrafish
XP_011601642 1087 AHKTRAKISAQRRPQSRAARQQAAKISAAK--ENAVLPISQPSGFVlSSEDks 1137 torafugu
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap