Conserved Protein Domain Family
Transpos_assoc

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pfam13963: Transpos_assoc (this model, PSSM-Id:290671 is obsolete and has been replaced by 433610)
Transposase-associated domain
Statistics
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PSSM-Id: 290671
Aligned: 72 rows
Threshold Bit Score: 74.5798
Created: 17-Jul-2015
Updated: 5-Aug-2015
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q0INP3         3 KQWM-DKPRHSREYSEGLDIFLQHEFS---SAVGNKIQCPCKKCAGSFWRDESEVHEHLICEGFLRGYKPLMFHGE 74  Japanese rice
XP_002453765   3 RSWIyNSELFSPAFLAGVDQFMDHVrc--kYSADEKIKCPCRKCLNHKEYYQDDVQEHIKLNGMSRCYTRWIHHGE 76  sorghum
XP_002461783   4 RSWIfNSEPFSPAFLAGVEEFMEHVRTr--FSEDKKIKCPCRKCLNQREKTQDEVQEDIEINGMSRCYTCWIHHGE 77  sorghum
XP_002489162   3 RRWIyNEKPFLQPFLDGVDQFMQHVra--rYSANEKIKCPCRKCLNHIEKSLDEVHEDIEINGMSRSYTRWIHHGE 76  sorghum
XP_002443418   3 RSWM-SKPRQDTAYQDGVEQFLNFAYHd--IPRDSEILCPCKKCKNRLNQSHDEVRTHLRCDGIVQGYTTWVHHGE 75  sorghum
XP_002451741   3 RTWM-NARLFSREHREGVNEFMNFVSEnlsGSQ--EILCPCRKCLNRLKKYKGEVEDHILMYGMSTTYTRWIHHGE 75  sorghum
XP_002449433   3 RSWV-HSRMFSKEHVAGVQDFMTFVSEr--FTDDEQILCPCRRCLNRVHGPKGQVEDHLYIHGMASTYTRWIHHGE 75  sorghum
XP_002438483   3 RSWI-KSRMFSREHVEGVKEFMTFVSEr--FNDDEDMLCPCRRCLNRVCKPKGHVEDHLYIHGMAATYTKWVHHGE 75  sorghum
XP_006355762  45 KSWInILNRLDPLYENGAKEFLHFASl--dRPDASAILCPCRKCRNMKFVRKDLIVEHIVVDGFLTSYTSWIYHGE 118 potato
XP_002442066   3 RSWI-KSRMFSRDDVEGVKEFMNFVSKrfnY---DDLLYPRHQCLNHVRKPKGQVEDHLYIHGMAATYTRWVYHGE 74  sorghum
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