Conserved Protein Domain Family
Pax2_C
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pfam12403: Pax2_C (this model, PSSM-Id:289189 is obsolete and has been replaced by 463563)
Paired-box protein 2 C terminal
This domain family is found in eukaryotes, and is approximately 110 amino acids in length. The family is found in association with pfam00292. This family is the C terminal of the paired-box protein 2 which is a transcription factor involved in embryonic development and organogenesis.
Links
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Statistics
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PSSM-Id: 289189
Aligned: 16 rows
Threshold Bit Score: 107.683
Created: 27-Jun-2015
Updated: 5-Aug-2015
Structure
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Aligned Rows:
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Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
A0JMA6       346 CSAP-SFS---AFSH-PASVYGQFTSH-MASGRDVVGSTLPGYPPHIP-SGQGNYASSAIAGMVaAGGDYSGNAYSHGAY 418 western clawed ...
XP_007432832 281 kSSL-STS---ANPD-LGNNVSGPQTYpVVTGRDMASTTLPGYPPHVPpTGQGSYPTSTLAGMV-PGSEFSGNPYSHPQY 354 Burmese python
AAC31813     319 ahlshGFS---SFSH-HAPVHGQFSSPsLMAGREVASSMLPGYPPHIP-TAQTGFSSSTIAGMV-SAPEYTGQSYSHPAY 392 zebrafish
XP_003904192  81 SSL--SAS---TNPE-LGSNVSGTQTYpVVTGRDMASTTLPGYPPHVPpTGQGSYPTSTLAGMV-PGSEFSGNPYSHPQY 153 olive baboon
XP_010750188  19 NSLA-NPG---TGAE-LGASVSGPQSYsLVPGRDLASTTLPGYPPHVPpTGQGSYSTPSLTGMV-PGGDFSGSPYSHPQY 92  large yellow cr...
XP_006629974 252 sSLA-NP----TPAD-LGTSVPGAQSYqLVAGRDLASTTLPGYPPHVPpAGQGSYSTPALTGMV-PGSDFSGSPYTHPQY 324 spotted gar
XP_008276653 253 NSLA-NPG---TGAE-LGASVSGPQSYsLVPGRDLASTTLPGYPPHVPpTGQGSYSTPSLTGMV-PGGDFSGSPYSHPQY 326 bicolor damselfish
ACM91589      87 aNLA-SP----TPAD-IGSSVPGPQSYpIVTGRDLASTTLPGYPPHVPpAGQGSYSAPTLTGMV-PGSEFSGSPYSHPQY 159 human
KKF21892     345 SSLSvDAStpsYPAHaHGPCYSQYASQpFIAGRDMASTTLPGYPPHVPpTGQGSYPTSTLAGMV-PGGDFSGNPYSHPQY 423 large yellow cr...
XP_005048357 345 ASTP-CYS---AFLH-HGAHFGQSSSQpLIAGRDMASTTLPGYPPHVPpTGQGSYPTSTLAGMV-PGSEFSGNPYSHPQY 418 collared flycat...

A0JMA6       419 AAYGESWRFPSSSLL-----------------------------GSPYYYSSATRTAPP------PTTAGAYD 456 western clawed frog
XP_007432832 355 TTYNEAWRFSNPALL-----------------------------SSPYYYSATSRGSAP------PTAAAAYD 392 Burmese python
AAC31813     393 SSYSEAWRFTNSSIL-----------------------------GSPYYYSFANRPPPP---------AGAFD 427 zebrafish
XP_003904192 154 TAYNEAWRFSNPALL-----------------------------MPP-------PGAPPlpllplPMTATSYr 190 olive baboon
XP_010750188  93 STYNESWRFPNPSLL-----------------------------VFQQDYG-SLLGTEI------GCSSSLFt 129 large yellow croaker
XP_006629974 325 STYNESWRFPNPSLL-----------------------------VFQQDYG-SRLGSEI------GCTSGffp 361 spotted gar
XP_008276653 327 STYNESWRFPNPSLLvfqqdygsllgteigcssslftsqagqmqGSPYYYSATSRGAGP------AATATAsa 393 bicolor damselfish
ACM91589     160 SSYNDSWRFPNPGLL-----------------------------GSPYYYSAAARGAAP------PAAATAYD 197 human
KKF21892     424 TTYNEAWRFSNPALL-----------------------------SSPYYYSAASRGSAP------PTAATAYD 461 large yellow croaker
XP_005048357 419 TTYNEAWRFSNPALL-----------------------------MPH-------PGAPHlpllplPMTATSYh 455 collared flycatcher
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