Conserved Protein Domain Family
U3_assoc_6

?
pfam08640: U3_assoc_6 (this model, PSSM-Id:285803 is obsolete and has been replaced by 462544)
U3 small nucleolar RNA-associated protein 6
This is a family of U3 nucleolar RNA-associated proteins which are involved in nucleolar processing of pre-18S ribosomal RNA.
Statistics
?
PSSM-Id: 285803
Aligned: 107 rows
Threshold Bit Score: 66.7889
Created: 22-Jul-2015
Updated: 5-Aug-2015
Structure
?
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
Q4UD34          9 LEDFAPDLRELLLRDLFTLKEIKSIVDRRRKFEFDIISPDPnlSLISYKNYIKYELELDKLLQSRYRKSKLmnknkNSNH 88   Theileria ann...
Q4DSU2         11 LERLLPSLEEYFTSGLLTHDETQDLARQRTHWEYRLIAKPL--LLLDVQNAVAYELGLEKRIEEYCRTTKLvlkhrwavl 88   Trypanosoma c...
Q38CX5         11 LEKLLPAMEEYFTSGFLTREETHEVARQRSHWEYRLVAKPL--LLLDVRSAARYELELEERLRQYCVATKLvlrhrwsii 88   Trypanosoma b...
CCD78991        9 LEDSVGEILHIRKAKLFNRLEINEIVRKRRHHEYSLQKRNK--RILDYDAYISTEITIIKLLRCRRQitndsryldkiek 86   Schistosoma m...
CDS28487        9 IENSLGEIVHIRKAKLFNEAEIREIVRHRRQHEYSIQKRNK--CISDYDSYIATELGILRLVSLRRIKMMdyrfkdeiek 86   Hymenolepis m...
EUB64694        9 vEDSLPEIVHIRRAKLFNEAELREVVRLRRHHEYSIQKRNK--RLSDYESYIAAELGILRLVIIRRQKTMdfrfkdeier 86   Echinococcus ...
XP_003375164    9 LEEFLPVFEHLEHLHIFNKNEIRRVIKKLKYYEYKQQKRNK--TKEDLLNLIKYLCSFYLLIRERRSVIKVfsnkeeief 86   Trichinella s...
EJW84760        9 IEGLLPVFETLRDVQLLSPTEIDAFVKRCHFFEYRLQKPRK--DPSSFKGYTDYLGSIMKLVRMRRKRLKY-----Rfre 81   Wuchereria ba...
XP_001568299   11 LEKLVPALDEYYTSGFLTREETVEVSRQRQHWEFRLVAKPL--LLLDVREAITYELGLEKRLREYCIYTKL-----NLQH 83   Leishmania br...
CBY22687        8 IEKLLPTFRAAIHCELLDEEEVKDIVRKRKKAEGKLIKREA--EIRDFIDFVYMDTMIIKLITKRRLKSQY-----KEKl 80   Oikopleura di...
Q4UD34         89 STI 91   Theileria annulata
Q4DSU2         89 eri 91   Trypanosoma cruzi
Q38CX5         89 erv 91   Trypanosoma brucei
CCD78991       87 sii 89   Schistosoma mansoni
CDS28487       87 sil 89   Hymenolepis microstoma
EUB64694       87 sii 89   Echinococcus granulosus
XP_003375164   87 ila 89   Trichinella spiralis
EJW84760       82 dei 84   Wuchereria bancrofti
XP_001568299   84 RWD 86   Leishmania braziliensis MHOM/BR/75/M2904
CBY22687       81 aei 83   Oikopleura dioica
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap