Conserved Protein Domain Family
SURF2
?
pfam05477: SURF2 (this model, PSSM-Id:283199 is obsolete and has been replaced by 461659)
Surfeit locus protein 2 (SURF2)
Surfeit locus protein 2 is part of a group of at least six sequence unrelated genes (Surf-1 to Surf-6). The six Surfeit genes have been classified as housekeeping genes, being expressed in all tissue types tested and not containing a TATA box in their promoter region. The exact function of SURF2 is unknown.
Links
?
Statistics
?
PSSM-Id: 283199
Aligned: 25 rows
Threshold Bit Score: 199.881
Created: 25-Jun-2015
Updated: 5-Aug-2015
Structure
?
Aligned Rows:
Download Cn3D
PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection: 
P09926         5 PSDVLAFLRQHPSLRLLPNTrKVRCSLTGHELPCRlpELQEYTRGKKYQrlsSSFSNFDYAAFEPHIVPSTKNR---HQL 81  house mouse
XP_005337024   5 SADVRAFLLQHPSLRLLPGAdKVRCALTGHELPCRlpELQVYTRGKKYQrlaRAPADFDYAEFEPHVVPSSKHP---HQL 81  thirteen-lined ...
XP_007475288   9 PPDVQDFLRGHPALQLCPGGtKVRCRLTGHELPSRlaPLQAYTSGKKYQrlmRTTQTFDYEEFEPHIVPSTKNP---HQL 85  gray short-tail...
XP_003757497   9 PPEVQEFLLDHPGLQLCPGGtKVRCKLTGHELPSRlsDLQAYTSGKKYQrliRTAQTFDYEDFEPHIMPSTKNP---HQM 85  Tasmanian devil
NP_001039294   9 PEEVRLFLRQQPLLSLVESG-KVRCRLTGHELPCRlaELQAYTDGRKYRrliKTSREFDYGTFEPHIVPSTKNI---HQL 84  chicken
XP_009390401  48 EEKEGAFLLGEPTFLDLGGG-RLRCVETGHELLAK--DEEAYGRTKACR---LALIDAAVAQKKPPLNMFQPHPtskSQL 121 wild Malaysian ...
XP_002298556   9 ETKEGSNLLGSPTFTQLENG-RFKCLESGHEVLAK--DKESYSHSKRCR---LGLIDFALANNKPPLNMFKQDPlsrSKL 82  black cottonwood
XP_004231834  16 tGKEGYKLLGNPTFKKLENG-RFKCVQTGHELPEHarD--SYAHSKHCR---LGLIDAALSKNKPPLNMFNQDPlnrSKL 89  tomato
XP_002521492   8 ESKEGNKLLGSPTFTELENG-RFKCVETGHEMLAK--DKDSYSQSKRCR---LGLIDFALANSKPPLNMFKQDPasrSKL 81  castor bean
XP_003548118   8 RKKEGSNLLGSPNFTELGNG-RFKCLETGHEVLSK--DIAFYSHSKKCR---LGLIDFALSNNKPPLNMFKQDPlcrSKL 81  soybean

P09926        82 FCKLTLRHINKSPEHVLRHTQGRRYQRA-------------L---------------HQY--E----------------- 114 house mouse
XP_005337024  82 FCKLTLRHINKSPAHVLRHTQGQRYQRA-------------L---------------RRY--E----------------- 114 thirteen-lined ...
XP_007475288  86 FCKLTLRHINRLPDHVLRHVQGQRYQKA-------------L---------------HKY--E----------------- 118 gray short-tail...
XP_003757497  86 FCKLTLRHINRLPEHILRHVQGRRYQKA-------------L---------------HKY--E----------------- 118 Tasmanian devil
NP_001039294  85 FCKLTLRHINKLPEHVLRHVQGKRYQKA-------------L---------------KTY--E----------------- 117 chicken
XP_009390401 122 VCKLTGDSVNKSEEHIWKHINGRKFHNK-------------L---------------EQK--Emekhssaeavekdtkqs 171 wild Malaysian ...
XP_002298556  83 ICKLTGDTVNKSEEHIWKHINGKRFLNK-------------L---------------EQKemE----------------- 117 black cottonwood
XP_004231834  90 ICKLTGDTVNKSEEHIWKHMSGKRFLRM-------------LekketetemenggleKQV--En---------------- 138 tomato
XP_002521492  82 ICKLTGDTVNKSEEHIWKHINGKRFLNK-------------L---------------EQK--Emgkve---------dkq 122 castor bean
XP_003548118  82 ICKLTGDNVNKSEEHIWKHMSGKRFLNKleqeeeekllchgL---------------EGG--Es---------------- 128 soybean

P09926       115 -ECQKQG---------------------V--E-----------------Yvp------------------------aCLL 129 house mouse
XP_005337024 115 -DCQKQG---------------------V--E-----------------Yvp------------------------aCLL 129 thirteen-lined ...
XP_007475288 119 -ECQKQG---------------------V--E-----------------Yip------------------------aCLL 133 gray short-tail...
XP_003757497 119 -ECQKQG---------------------V--E-----------------Yip------------------------aCLL 133 Tasmanian devil
NP_001039294 118 -KCQKEG---------------------V--K-----------------Yvp------------------------aCLR 132 chicken
XP_009390401 172 kKQVKST---------------------L--G-----------------Srnr---------------------vrkKDM 190 wild Malaysian ...
XP_002298556 118 -KLESNG---------------------LvaE-----------------EveaelkssqggakkkkknkkkqnkveeIIS 158 black cottonwood
XP_004231834 139 -EAAKKTdskanrrd-----kkknkkkeI--E-----------------Das------------------------kVIS 169 tomato
XP_002521492 123 kEDSKSS---------------------A--DgpkkkkkktkkkekeekPie------------------------eIIS 155 castor bean
XP_003548118 129 lHESKSAdggkkdrmmkkkknkknkvkeI--D-----------------Eek------------------------sQVS 165 soybean

P09926       130 HKRKKRE---DQTNSdelpgqrtgFWEPASsde----edALSDDSM-----TDLY---------PPELFTkRELGKPKND 188 house mouse
XP_005337024 130 HKKRRVEs---QVDGnqppglreaFWEPLSsde----sgALSDDSM-----TDLY---------PPELFTrKDPGGPEDL 188 thirteen-lined ...
XP_007475288 134 QKRRKRE---DLIDSdqqp-rkkdFWQPESsde----edQ-SDDSM-----TDLY---------PPELFSeKNPGKNGDV 190 gray short-tail...
XP_003757497 134 QKKRRQk---DLIDGdqhsrkkedFWKPDSsde----edK-SDDSM-----TDLY---------PPELFTeKNSGENGDG 191 Tasmanian devil
NP_001039294 133 QKQQRRQhadDQMDGsrqphrteeFWEPNSprtdededgEETDDSM-----SDLY---------PPGLFPeKSPAAPQNT 198 chicken
XP_009390401 191 NMNDSHTkktKADDDddmv--epeFWVPPVg-------sRWDLDDG-----KDRW---------DPQT----NMVDEADD 243 wild Malaysian ...
XP_002298556 159 QVRDSSDkdsDLEETd--------FWIPPAge-------rwDFDDG-----GDRW---------GSDAESe-HESQEENp 208 black cottonwood
XP_004231834 170 EIRDSSGknsGSEDDd-------eFWMPPVg-------aRWDNDDG-----GDRW---------GSGSESeEEEEDAIg- 220 tomato
XP_002521492 156 EVRDSSDkdsDTEELd--------FWMPPVge-------rwDFDDG-----GDRW---------GSDGEl-EQETEKENG 205 castor bean
XP_003548118 166 KSADGAKkdrMKKENnkdkgieevISEVRKssn----enSDTEEDFwmppaGDRWdnddggdrwGSESESe-QGTEEGDV 240 soybean

P09926       189 DtpeDFLTDQQ-------------D---------------EkpehseeksfrereearvghKR--G-----------R-- 225 house mouse
XP_005337024 189 DgadAFLTDQE-------------N---------------Eel-----------------kSPrmKgtgdrreakvdL-- 221 thirteen-lined ...
XP_007475288 191 Eg--SYLTDNE-------------DntqpsrengivgrgeKme-----------------vDRpiC-----------N-- 225 gray short-tail...
XP_003757497 192 SrshLTDTEDNtqpsrenginsrgE---------------Kme-----------------vDRpmC-----------R-- 226 Tasmanian devil
NP_001039294 199 EandGFATDSE-------------D---------------Dga-----------------kLSreN-----------Sdv 222 chicken
XP_009390401 244 GsglDGISEKD-------------D---------------P--------------------ETieL-----------S-- 262 wild Malaysian ...
XP_002298556 209 ---aDDAVEDN-------------G---------------E--------------------ESkeL-----------S-- 224 black cottonwood
XP_004231834 221 ---qDGGTEEE-------------Nh-----------------------------------DTgeL-----------S-- 236 tomato
XP_002521492 206 a---DDAVDEN-------------G---------------K--------------------ESeeL-----------S-- 221 castor bean
XP_003548118 241 I---DGDAAED-------------C---------------K--------------------ESeeL-----------S-- 256 soybean

P09926       226 --------------KLRKKQL---TSLTKKFKS 241 house mouse
XP_005337024 222 --------------KRKKKHL---HSLTKKLKN 237 thirteen-lined ground squirrel
XP_007475288 226 --------------KRTKQ------SASVKFKN 238 gray short-tailed opossum
XP_003757497 227 --------------KRTKK------SASMKFKN 239 Tasmanian devil
NP_001039294 223 ngdggrmevsraagKRGKKQS---GPSKKKFKS 252 chicken
XP_009390401 263 --------------NRTKRMSivvGPSSFASRK 281 wild Malaysian banana
XP_002298556 225 --------------TRAKRMSieigpsssasrk 243 black cottonwood
XP_004231834 237 --------------KRAKRMSleiGPSSFASRK 255 tomato
XP_002521492 222 --------------KRTKRMSieigpssfaskk 240 castor bean
XP_003548118 257 --------------SRTKRMSieiGPSSFATRK 275 soybean
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap