Conserved Protein Domain Family
HigB-like_toxin

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pfam05015: HigB-like_toxin (this model, PSSM-Id:282822 is obsolete and has been replaced by 398609)
RelE-like toxin of type II toxin-antitoxin system HigB
This family carries several different examples of type II bacterial toxins of toxin-antitoxin systems including many HigB-like ones. The fold is referred to as the RelE/YoeB/Txe/Yeeu fold suggesting all examples of these are present in this family. Several plasmids with proteic killer gene-systems have been reported. All of them encode a stable toxin and an unstable antidote. Upon loss of the plasmid, the less stable inhibitor is inactivated more rapidly than the toxin, allowing the toxin to be activated. The activation of these systems results in cell filamentation and cessation of viable cell production. It has been verified that both the stable killer and the unstable inhibitor of the systems are short polypeptides. This family corresponds to the toxin.
Statistics
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PSSM-Id: 282822
Aligned: 6 rows
Threshold Bit Score: 114.45
Created: 5-May-2019
Updated: 18-Jul-2019
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q98K96          3 VGFRDGWLRAFFVDDTRsRNIPSDLESRLFRKLQMIDDATVDQDLRVpPSNHFEKLRG-NLEGFHSIRVNQQWRLIFRWD 81  Mesorhizobium ...
Q9PFE9         15 KSFRHKGIQQFFLEGST-AGIQTKHAAKLRIQLTALESAKHPKDMNA-PGWKLHSLKGaDLKGHWSIWVNGNYRLTFAFE 92  Xylella fastid...
tigr:DNO_0274  30 KSFAHKGLKRFFEDDDT-RGIQPHHAEKLRVLLYAMDIAETIQELDI-EGAELHRLKG-KLKTHWSLKVNGNWRVIFEFK 106 Dichelobacter ...
Q9KMG5          3 LEFKDKWLEQFYEDDKRhRLIPSSIENALFRKLEILDAAQAESDLRIpPGNRFEHLEG-NLKGWCSIRVNKQYRLIFQW- 80  Vibrio cholera...
Q9PCR9          3 VKFEDPSLERL----EAnQKYTAGLVKVFHRRIQFIRASPDERAFYAmKSLHYEKLKD-DPDNLYSMHLNDQWHLIMYLK 77  Xylella fastid...
P44138          7 EHFRDDYLYRFYQYGDThSKIPSNLYKVLARKLDMISASENINDLRSpPANHLELLEP-KENKIYSIRVNKQYCLIFKY- 84  Haemophilus in...
Q98K96         82 GGRGEASDi-----YLDDH 95  Mesorhizobium loti
Q9PFE9         93 GEDAILVD------YQDYH 105 Xylella fastidiosa
tigr:DNO_0274 107 DGNAYIVD------YVDYH 119 Dichelobacter nodosus VCS1703A
Q9KMG5         81 -VDGVALNt-----YLDPH 93  Vibrio cholerae O1 biovar El Tor str. N16961
Q9PCR9         78 AKEDDTRNlvvivsIVDYH 96  Xylella fastidiosa
P44138         85 -ENNEVNNl-----YLDPH 97  Haemophilus influenzae Rd KW20
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