2WCK,1DQE,1TUJ,3Q8I,2H8V


Conserved Protein Domain Family
PBP_GOBP

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pfam01395: PBP_GOBP (this model, PSSM-Id:279703 is obsolete and has been replaced by 396118)
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PBP/GOBP family
The olfactory receptors of terrestrial animals exist in an aqueous environment, yet detect odorants that are primarily hydrophobic. The aqueous solubility of hydrophobic odorants is thought to be greatly enhanced via odorant binding proteins which exist in the extracellular fluid surrounding the odorant receptors. This family is composed of pheromone binding proteins (PBP), which are male-specific and associate with pheromone-sensitive neurons and general-odorant binding proteins (GOBP).
Statistics
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PSSM-Id: 279703
View PSSM: pfam01395
Aligned: 222 rows
Threshold Bit Score: 38.2215
Threshold Setting Gi: 78100778
Created: 22-Jun-2015
Updated: 5-Aug-2015
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2WCK_A         1 TAEVMSHVTAHFGKTLEECR-EESG--LSVD--I---LDEFKHfwsddfdvvH------REL-GCAIICMSNKFSLMDDD 65  domestic silkworm
Q0IF93       166 yqEKGVKIKQKEQSLFMHC--EALNypKGSP--QrkdLCGIRKyqm-----------gsGIVfERHMECIFKGLRYMTSK 230 yellow fever mo...
Q2M0N3         1 ELSPTMKKQVGKLKDRCIKQ-TGAS--AERM--L---QAKKDQv--------Lpdd-paFKC-FLHCMFDMLGLIDSHNV 62  Drosophila pseu...
Q28YE8         1 LTDTQKAELKERAKACAGQE-GVTK--EQAL--A---LRAGNF---------Edad-pkVKCfANCFLEKAGFVVDG-QI 61  Drosophila pseu...
Q1W633        15 GALTLEELQIGLRAVIPVCR-IDSG--IDEK--K---EDDFRNg--------Iidv-enEKV-QLFSECLIKKFNAYDDG 76  honey bee
NP_001035295  15 gAMTHEELKTGIQTLQPICV-GETG--TSQK--I---IDEVYN---------GnvnvedENV-QSYVECMMKKFNVVDEN 76  honey bee
NP_001035297  15 SAMTLDELKSGLHTVQSVCM-KEIG--TAQQ--I---IDDINE---------GkinmddENV-LLFIECTMKKFNVVDEN 76  honey bee
XP_001845869  19 qARHTNEQIQMIQPHYDMCV-ERNG--LQDApkI---ADAGLA---------Elvt-rtDDVsKKVIQCVLLRLNLIDCQ 82  southern house ...
XP_317190    160 IYAAMPQIKQKGESFFAYCA-KKIWggYNKK--E---WKRGRNyel-----------sgSSQfKKVIDCIFRGLRYMDDS 222 Anopheles gambi...
XP_001606430  17 NALFGPKLKEKLLEREDACLrETGNtlLSID--H---VRRTKTlp------------edGSL-DKFALCLLKKHRIVNDD 78  jewel wasp
2WCK_A        66 vRMHHVNMDEYIKSFPNgqvlaEKMVKLIHNCekQFDTETD--DCTRVVKVAACFKED 121 domestic silkworm
Q0IF93       231 nELDVDEIARDFIVVKKk---pDAMKAMMKTCk-ANLKEKN--PGKIAVHYYKCLMND 282 yellow fever mosquito
Q2M0N3        63 mQLESLIEVLPEEIHPE-----INALVGNCGT--QKGIDGC--DTAFLTVKCYLSVNK 111 Drosophila pseudoobscura
Q28YE8        62 kPDVVLAKLGPIAGVDKv----NAVQAKCDSL----KGADKceTSYELYKCYYQNRAE 111 Drosophila pseudoobscura
Q1W633        77 gNFNEVVVREIAEIYLDe----NEVNKLITEC--SAISDAD--IHLKSSKLIKCFAKY 126 honey bee
NP_001035295  77 gNFNEKNTRDIVQAVLDd----NETDQLIVEC--SPISDAN--VHIKISKIFQCFMKY 126 honey bee
NP_001035297  77 aNFNEKISSDIVRAVLNd----NEADQLLAEC--SPISDPN--ALIKISKILECFFKY 126 honey bee
XP_001845869  83 gTVKRKRFEAFYEDGHEv----DTLPGVINGC--TQRKGT---ALEKTFNFYKCFFEQ 131 southern house mosquito
XP_317190    223 -GLKVKEIVRDYELTETl---dEASKNSIEECarNASEKDD--IPKRSLAMYSCLLDg 274 Anopheles gambiae str. PEST
XP_001606430  79 dTVNKDKHRYYLILDDG------RKKEYAEDCv-LSSGGSN--NGEIARHLLSCLLKT 127 jewel wasp
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