3FY4,3UMV,1DNP,1OWL


Conserved Protein Domain Family
DNA_photolyase

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pfam00875: DNA_photolyase (this model, PSSM-Id:279247 is obsolete and has been replaced by 334295)
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DNA photolyase
This domain binds a light harvesting cofactor.
Statistics
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PSSM-Id: 279247
View PSSM: pfam00875
Aligned: 89 rows
Threshold Bit Score: 94.2051
Threshold Setting Gi: 364506185
Created: 7-Jul-2015
Updated: 5-Aug-2015
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3FY4_C         7 SLIWFRKGLRVHDNPALE----YA----SKGSEFMYPVFVIDPHyMESDpsafspgssraGVNRIR--FLLESLKDLDSS 76  thale cress
P12769        22 VVYWMQASVRSHWNHALEyaieTA----NSLKKPLIVVFGLTDDf--------------pNANSRHyrFLIEGLRDVRSN 83  Methanothermoba...
Q9Q8H4        20 VVYWMYREHRIRDNWGLYyaqqKA----IRHAVPLYVCVCLT-Sf--------------hLTTSRHvtFLLEGLRDVEDE 80  Myxoma virus
Q3B5H5        20 VIYWMSRDQRVEQNRALHyarfRA----VADGAPLIVAFTLSPSf--------------iGATFRQydFMLRGLMEVERR 81  Chlorobium lute...
3UMV_A        40 VVYWMLRDQRLADNWALL----HAaglaAASASPLAVAFALFPR-PFLL-----------SARRRQlgFLLRGLRRLAAD 103
Q8TIS6        19 VAYWMSRDQRVEDNWALLfaqvIA----QEANVPVVVVFCLIEGf--------------lGAGRRHyeFMLKGLQELEEA 80  Methanosarcina ...
Q6AK21        27 VVYWVSRDQRVRDNWALLwaqqEA----ISRQKGLLVVFCLVPDy--------------lGAKSSQylFMLRGLARMQKK 88  Desulfotalea ps...
Q72FV1        19 VLYWMHREHRAHDNWALV----HAigeaKAAGAPLAVVWCLSPR-FLDA-----------AYRQFH--FLLRGMRGTAET 80  Desulfovibrio v...
XP_001417095  29 VVYWLSRDQRVRDNWALLracdVA----RANDAPVVIAFNLLTKf--------------lGAGARQfgFMLRGLRELEGA 90  Ostreococcus lu...
NP_039121     39 VLYWMFRDQRVQDNWALI----YAqrlaLKLKIPLRICFCVVPK-FHTT-----------TSRHFM--FLISGLKEVAEE 100 Fowlpox virus
3FY4_C        77 LKKLGSRLLVFKG-EPGEVLVRCLQEWKVKRLCFEYDTDPYYQALDVKVKDYAS-ST--GVEVFSPVSHTLFNPAHIiEK 152 thale cress
P12769        84 LRERGIQLVVERD-SPPSVLLKY--ADDAAAAVTDRGYLDIQKEWVDEAAGALH------IPLTQVESNVIVPVETA--S 152 Methanothermoba...
Q9Q8H4        81 CVKRSFGFVVRYG-RPEVVLPEEVKKRNARWVFVDFYPLRVPEKDISNVVESLK-D---VATVIQVDSHNIVPCWIT--S 153 Myxoma virus
Q3B5H5        82 LRELEIGFVLLEG-DPAEAIVRFRESIGSGCVVTDYSPLRISRRWKATAAAALP------VLFIEVDAHNIVPCLMA--S 152 Chlorobium lute...
3UMV_A       104 AAARHLPFFLFTG-GPAE-IPALVQRLGASTLVADFSPLRPVREALDAVVGDLR-REapGVAVHQVDAHNVVPVWTA-SA 179
Q8TIS6        81 LSRKKIPFYFLRG-DPGQKIPEFVKEYEVGTLITDFSPLRIKAEWVGKIISAIE------IPFFEVDAHNVVPCWEA--S 151 Methanosarcina ...
Q6AK21        89 LHEMNIHFTLFEQ-SPDDILPGFLRQIDAHLLVSDFDPLRIKRQWTEQLIAQVV------TPIYQVDTHNIIPAWMV--S 159 Desulfotalea ps...
Q72FV1        81 LREHGIPFFLLQG-DPADEVPRFAATHGTGLVVTDFDVLRLKRAWLGQVREALA------CPLHEVDGRNVVPCRMA-SD 152 Desulfovibrio v...
XP_001417095  91 AKAKNVTFAMTYGdEPAIAIDALAKKIGAKTIVCDFSPLRDGLKWRKELAALCEaR---SAHCEECDAHNVVPCWEA--S 165 Ostreococcus lu...
NP_039121    101 CKRLCIGFSLIYG-VPKVIIPCIVKKYRVGVIITDFFPLRVPERLMKQTVISLP-D---NIPFIQVDAHNIVPCWEA-SD 174 Fowlpox virus
3FY4_C       153 NGG-KPPLSYQSFLK-VAG---EPSCA--KS 176 thale cress
P12769       153 DKEeYSAGTFKPKIKrHLKrfmVPLRMrtLK 183 Methanothermobacter thermautotrophicus str. Delta H
Q9Q8H4       154 SKQeYSARTFRLKIQkLLTtylTKFPN--IG 182 Myxoma virus
Q3B5H5       153 PKQeYSARTFRPKVNrLLGeflIALPP--VE 181 Chlorobium luteolum DSM 273
3UMV_A       180 KME-YSAKTFRGKVSkVMDeylVEFPE--LP 207
Q8TIS6       152 PKQeYAAHTFRPKLYgHLSeflEEFPElePN 182 Methanosarcina acetivorans
Q6AK21       160 DKKeYAAYTIRPKIKrLLDdflTDIPP--LQ 188 Desulfotalea psychrophila
Q72FV1       153 KRE-YAARTLRPKIHrLLPeylDPFPSlate 182 Desulfovibrio vulgaris str. Hildenborough
XP_001417095 166 DKLeVGARTLRGRLAkRYPeflHEFPE--VP 194 Ostreococcus lucimarinus CCE9901
NP_039121    175 KEE-YGARTLRKKIFdKLYeymtefpvvrkh 204 Fowlpox virus
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