2HA8,4JAL,3KTY,3ILK


Conserved Protein Domain Family
SpoU_methylase

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pfam00588: SpoU_methylase (this model, PSSM-Id:278985 is obsolete and has been replaced by 425768)
Click on image for an interactive view with Cn3D
SpoU rRNA Methylase family
This family of proteins probably use S-AdoMet.
Statistics
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PSSM-Id: 278985
Aligned: 125 rows
Threshold Bit Score: 91.0465
Created: 20-Jun-2015
Updated: 5-Aug-2015
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2HA8_B  26 RLIVVASLIDKPTNLGGLCRTCEVFGASVLVVgSLQCI--SDKQ----FQHLsVSA-EQWLP-LVEvkpPQLIDYLQQ-- 95  human
Q8F8B1   2 sLYIGLYRPEIPPNTGNIARLCVALGA-ELHIvGQASFdlSEKA----ARRAgLDY-WDKVKiYFH---SSLEEYKVA-- 70  Leptospira interrogans
Q9RXS5  10 LLHVVLFEPEKAGNVGNVARTCSVLGA-ELHLiRPFGFhlHDRE----FRRAvMDY-LQGVTlHEY---AGWSDFQAQ-- 78  Deinococcus radiodurans
Q6F190   4 QVNIVLYEPEIAQNVAAIIRTCVATNA-KLHIiEPLGFifKKEE----MNRAsAGT-FDLVEyQLY---DDWEDFCEK-- 72  Mesoplasma florum
Q98QQ8   1 MINIVLYQPEIPPNTGNIIRTCFATSS-KLHIiKPIAFdlNPRF----LKRSaAGHlLSEIQhEVH---DSYNDFLAK-- 70  Mycoplasma pulmonis
Q7NBG1   6 KINVVLYRPQDPRNAGNIARSCVGFNA-TLHLiHPFGFfiTDER----FKRAgLDY-WDHLNlKQY---ADFDDFIKQ-- 74  Mycoplasma gallisepticum
Q9PQM3   1 MLNIVLFEPEIILNTGNIARMCVGFDANLHLVrP-YGFilDKKRfhkdFIRAsTNH-LNALKlYEY---DDFNEFINK-- 73  Ureaplasma parvum
Q7M8R3   2 KLQIVLVEPRIPQNTGNIGRLCAATQS-ALHLiHPLGFtlSQKE----IKRAgMDY-WEHLElYEW---SSLEAFTEAhp 72  Wolinella succinogenes
Q729V9   1 MMHIVLYHPEIPPNTGNVARLCAATRT-RLHLiEPLGFslDDRY----LKRAgLDY-WPHVPlTVW---ASWEDFLSR-- 69  Desulfovibrio vulgari...
P74516   1 MVKLVLVNPQIPPNTGNIARTCAATGT-ELHLvGPLGFelGDRY----LKRAgLDY-WPYVDlHYH---NSCEEFITH-- 69  Synechocystis sp. PCC...
2HA8_B  96 KKTEg-YTIIGVEQtaKSLDLT-QY----CFP-------EKSLLLLGNEREGIPANLIQQLD--VCVEIPQ-QGIIRSLN 159 human
Q8F8B1  71 LPSG--TNLYLISIy-GKRSYT-NV----SYR-------KGDAFLFGNETSGVPLEIKNSWDqeRILKIPM-EDSSRCLN 134 Leptospira interrogans
Q9RXS5  79 LPDA--ARVFAFST--HAT----EYhtraGFK-------RGDYLLFGPESRGLPVWLRDALP---KLKLPQ-PGRGRSLN 139 Deinococcus radiodurans
Q6F190  73 NPS---IDLFCISR--YGEKPHsDF----DFNsy----qKPVFVMFGKESTGIPKQIIKDNYe-NTFRLPM-SPQTRSIN 137 Mesoplasma florum
Q98QQ8  71 YQNEniFYITRY----SQKSYS-DI----DFKletfdgkKDIFFVFGTESTGIPKKILSQNId-KTLRIPM-APENRSLN 139 Mycoplasma pulmonis
Q7NBG1  75 NQID--ENLFLFTK--KANNYLsNI----DFKeyl-dhdQRIYLVFGQETNGLPDQLLNKYQd-NLVKIPM-HNAIRSFN 143 Mycoplasma gallisepticum
Q9PQM3  74 NNISg-DEIYFFTR--YGTKTPcDY----QYQnii---qhnVYLVFGKESTGIDHNILKKYPh-NWIRIPT-SINLRSLN 141 Ureaplasma parvum
Q7M8R3  73 FGES--HFLLTT----KAKRAYfEA----SLP-------PSAYLYFGREDAGLPQVLLEAHPq-AMLKIPM-KEGNRSLN 133 Wolinella succinogenes
Q729V9  70 GVEG--RRLVTTSAr-GGTAVH-RF----TYA-------PDDMLVFGPETTGLPQEVLDLTP--HRVCIPI-WGEVRSIN 131 Desulfovibrio vulgari...
P74516  70 WRGQg-GNLLGFSV--TGTVNFwDY----TYQ-------STDWLMMGSETDGLPQMMRDLST--QLLCIPMpHSEVRSLN 133 Synechocystis sp. PCC...
2HA8_B 160 VHVSGALLIW 169 human
Q8F8B1 135 LSNSVAVISY 144 Leptospira interrogans
Q9RXS5 140 LSVAVGAAAF 149 Deinococcus radiodurans
Q6F190 138 VANTVGIVTY 147 Mesoplasma florum
Q98QQ8 140 LANSVVVIIY 149 Mycoplasma pulmonis
Q7NBG1 144 LANSVICALY 153 Mycoplasma gallisepticum
Q9PQM3 142 IANSVAMGIY 151 Ureaplasma parvum
Q7M8R3 134 LATATGIVLY 143 Wolinella succinogenes
Q729V9 132 LSTATGVVLY 141 Desulfovibrio vulgaris str. Hildenborough
P74516 134 LASSAAIALF 143 Synechocystis sp. PCC 6803 substr. Kazusa
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