1NJM,1P85,1VW4,1VX7,4CXD,3JYW,3J61,4CE4,3ZF7,4A17,3J21,2QEX


Conserved Protein Domain Family
Ribosomal_L16

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pfam00252: Ribosomal_L16 (this model, PSSM-Id:278672 is obsolete and has been replaced by 459733)
Click on image for an interactive view with Cn3D
Ribosomal protein L16p/L10e
Statistics
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PSSM-Id: 278672
Aligned: 549 rows
Threshold Bit Score: 63.9785
Created: 10-Jun-2015
Updated: 5-Aug-2015
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1NJM_K         4 PKRTKFRKQFrgRMTGDA-KGGDYVAFGD-----------YGLIAMEPAWIKSNQIEACRIVMSRHFR------RGG--- 62  Deinococcus rad...
Q8SR96        12 LSKKAYPKSR--FNRGVPdSKIQIFDLGRrkagvlefpllVNCISNERENLSAEALEAARICANKYMVk----hAGKdn- 84  Encephalitozoon...
EIJ89212      61 IKNKPYPKSR--FCRGVPdSKVSKYDTGKrkatvlelpicTNLVSLEREQISAEALEASRIALNKYLSt----hLEKda- 133 Nematocida pari...
KKO75322      12 LSKKAYHKSR--FCKSVPdLKIKIWDSGRrkaevldfpacINLVSHARENISEQALDAARIAAHHYMVk----tAGRdn- 84  Nosema ceranae
XP_007603725  12 ISKKAYVKSR--FCRGVPeSKIAIHDLGNrkahveafparINLVSAEKENISSEALEAARIAANKYMIk----tIGKdn- 84  Vittaforma corn...
XP_009037883  12 QKNKPYIKSR--YCRGVPdPKIRIFDCGNkkasvdqfpfvAHLVSDEKEQISSNALEAARVACNKYLIk----nCGKea- 84  Aureococcus ano...
XP_009860540  12 CKNKPYPKSR--FCRGVPdPKIRIFDLGRkradvrdfplcMHMVSDELEQLSSEALEAARICANKXVRgwnncvFFFvyf 89  vase tunicate
CDQ03292      12 IKNKPYPKSR--FYRGVPdPKIRIFDWGKkkaavd---efplyVCLMRENI----FHRKRLRQFIFVLi----nLCKel- 77  Brugia malayi
XP_004184438  53 TRGHPYPKSK--YCRGVPdPRIRLFDIGNrqasvdefpscVHIVGLEHENISSEAMEAARVSINKTLMk----yAGKdt- 125 Entamoeba invad...
XP_001303855  12 IGNKPYPKSR--FCRGVPdPRIIRYETGTktahakelpicCRLILLEHECVSSEALEAARVSSNRYMMk----tMGKdg- 84  Trichomonas vag...
1NJM_K        63 -KIYIRIFPDK-----PVTKK-----PAETRMGKGK----GAVEYWVSVVKPGRVMFEV----AgvTEEQAKEAFRLAGH 123 Deinococcus rad...
Q8SR96        85 fHLRIRVYPFH-----VLRINkmlscAGADRLQTGMrgsfGKPYGRAARVVFNQPILSIrtkeS--FRDAAVEALRRAKN 157 Encephalitozoon...
EIJ89212     134 fHFRLKVHTHH-----VVRINkmlscAGADRLQTGMrgsfGKPNGRTARVNIGQVLISVrskeG--TEEKVREGLRRAMH 206 Nematocida pari...
KKO75322      85 fHLRVNVYPFH-----VLRINkmlscAGADRLQTGMrqsfGKPEGRVARIFFDQVVMSIrtkkG--NEAAAVEALRRSKH 157 Nosema ceranae
XP_007603725  85 yHLRVCCQPIH-----ILRINkmltcAGADRLQTGMrgsfGKAYGRAARVFVGRHILSVrtkeN--FIKDAKEALRRAKN 157 Vittaforma corn...
XP_009037883  85 yHIRTRAHPFH-----VIRQNkmlscAGADRLSSGMrhsyGKPMERAARVSIGQAVLSVrakdA--NADAVLVALRRAKF 157 Aureococcus ano...
XP_009860540  90 lAFLSRTSYVFgnftxIL------------RLQTGMrgayGKPQGLVARVKIGQPIMSMrckdS--ARAHAIEALRRAKF 155 vase tunicate
CDQ03292      78 wQRRFVEHPYH-----IVRINkmlscAGADRLETGMrgdfGKPQDLVVRIDIGDILISVrvkeQ--HEEHAVEAFRRAKF 150 Brugia malayi
XP_004184438 126 yHVRVRIHPYH-----VLRINkmlscAGADRLQTGMrgawGKSYGTCARVKVNQILVSGrckkA--CLEPMIKAFRLACY 198 Entamoeba invad...
XP_001303855  85 yHIKINLHPFH-----VLRINkmlstAGADRLQTGMrhafGKPEGLVARANYNSQIMTIrttsA--GLKHALEALRRASF 157 Trichomonas vag...
1NJM_K       124 KL 125 Deinococcus radiodurans R1
Q8SR96       158 KF 159 Encephalitozoon cuniculi GB-M1
EIJ89212     207 KF 208 Nematocida parisii ERTm3
KKO75322     158 KF 159 Nosema ceranae
XP_007603725 158 KL 159 Vittaforma corneae ATCC 50505
XP_009037883 158 KF 159 Aureococcus anophagefferens
XP_009860540 156 KF 157 vase tunicate
CDQ03292     151 KF 152 Brugia malayi
XP_004184438 199 KF 200 Entamoeba invadens IP1
XP_001303855 158 KF 159 Trichomonas vaginalis G3
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