1U5M


Conserved Protein Domain Family
VWC

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pfam00093: VWC 
Click on image for an interactive view with Cn3D
von Willebrand factor type C domain
The high cutoff was used to prevent overlap with pfam00094.
Statistics
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PSSM-Id: 278520
View PSSM: pfam00093
Aligned: 20 rows
Threshold Bit Score: 47.4192
Threshold Setting Gi: 116057
Created: 13-Mar-2017
Updated: 23-May-2017
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1U5M_A         10 CVQDGQRYNDKDVWKPEP--------CRICVCDT--------GTVLCDDII--CEDVkDCLSP----------------E 55
gi 117949802  318 CYHNGVQYRNNEEWTVDS--------CTECHCQN--------SVTICKKVS--CPIM-PCSNAtv--------------- 363
gi 342187084  320 CVQEGRIFAENETWVVDS--------CTTCTCKK--------FKTVCHQIT--CSPA-TCANP----------------S 364
gi 549133     326 CWQDGRVFADSESWIVDS--------CTKCTCQD--------SKIVCHQIT--CPPV-SCADPs---------------- 370
gi 2498930    941 CKVVNKVYENGQEWHPILmshg-eqkCIKCRCKD--------SKVNCDRKR--CSRS-TCQQQtrvtskrrlfekpdaaA 1008
gi 2498930    832 CRLGEQFHPAGASWHPFLppng-fdtCTTCSCDPl------tLEIRCPRLV--CPPL-QCSEKla-------------yR 888
gi 317373549 2431 CVHRSTIYPVGQFWEEG---------CDVCTCTDmedavmglRVAQCSQKP--CE-D-SCRSGft-------------yV 2484
gi 2498930    744 CFHSGRFYNESEQWRSAQd------sCQMCACLR--------GQSSCEVIK--CPAL-KCKSTeq-------------lL 793
gi 147904525  324 CLHNGVLHKNRDEWTVDS--------CTECTCQN--------SATICRKVS--CPLM-PCTNA----------------T 368
gi 2498930    102 CQFGKVLRELGSTWYADLgppfgvmyCIKCECVAipkkrrivARVQCRNIKneCPPA-KCDDP----------------I 164
                          90
                  ....*....|.
1U5M_A         56 IPFGECCP-IC 65
gi 117949802  364 -pDGECCP-RC 372
gi 342187084  365 FVEGECCP-SC 374
gi 549133     371 fIEGECCP-VC 380
gi 2498930   1009 PAIDECCStQC 1019
gi 2498930    889 PDKKACCK-IC 898
gi 317373549 2485 LHEGECCG-RC 2494
gi 2498930    794 QRDGECCP-SC 803
gi 147904525  369 IPDGECCP-RC 378
gi 2498930    165 SLPGKCCK-TC 174
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