2DLC


Conserved Protein Domain Family
tyrS

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TIGR00234: tyrS 
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tyrosyl-tRNA synthetase
This tyrosyl-tRNA synthetase model starts picking up tryptophanyl-tRNA synthetases at scores of 0 and below. The proteins found by this model have a deep split between two groups. One group contains bacterial and organellar eukaryotic examples. The other contains archaeal and cytosolic eukaryotic examples. [Protein synthesis, tRNA aminoacylation]
Statistics
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PSSM-Id: 272976
Aligned: 16 rows
Threshold Bit Score: 312.409
Created: 7-Oct-2014
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2DLC_X         9 PN------EAFGLITKNLQEVLNPQiIKDVLEVQKr-----HLKLYWGTAPTG-RPHCGYFVPMTKLADFLKAGCEVTVL 76  Saccharomyces c...
P22326         1 MT------NLLEDLSFRGLIQQMTD-EEGLNKQLNe----eKIRLYSGFDPTAdSLHIGHLLPILTLRRFQLAGHHPIAL 69  Bacillus subtil...
P75122         2 TK------DLLALLKERGLFVQANF-EKELKQLLNq----gSFAFYVGFDPTApSLHIGNYVLLHVAQIFQAMGHIPHVL 70  Mycoplasma pneu...
P48527        47 GTsdsrsdNILDELKQRGLVSQVSQpESFLRTKLNgn---dKIKLYCGVDPTAqSLHLGNLVPLMVLLHFYVKGHDIVTV 123 Saccharomyces c...
O29482         3 IT------EKLRLITRNAEEVVTEEeLRQLIETKEk------PRAYVGYEPSG-EIHLGHMMTVQKLMDLQEAGFEIIVL 69  Archaeoglobus f...
O27795         1 MD------DSLKTITRDVLEVITPEeLMDVLKKDE-------PVVYTGYEPSG-RIHLGHALTVRKLRELQDAGFRVKIL 66  Methanothermoba...
P36421         9 PN------EAFGLITKNLQEVLNPQiIKDVLEVQKr-----HLKLYWGTAPTG-RPHCGYFVPMTKLADFLKAGCEVTVL 76  Saccharomyces c...
WP_001569899   3 sS------NLIKQLQERGLVAQVTD-EEALAERLAq----gPIALYCGFDPTAdSLHLGHLVPLLCLKRFQQAGHKPVAL 71  Escherichia coli
WP_010869488   2 lN------NILQFLKERELYSQANF-ETELDNHLKe----kKNNFYVGFDPTAnSLHIGNYVLIHIAKLLKDMGHTPHIV 70  Mycoplasma geni...
WP_014906672  29 EV------ERQLQLYMTGAHEVIPP-EELKAKLVKsistgtPLKIKLGLDPSApDVHLGHTVVLNKLRQFQENGHIVQLL 101 Bacillus subtilis
2DLC_X        77 LADLHAFLDNMKAPLEVVNYRAK-----YYELTIKAILRSINVp-----------iE----KLKFVVGSSYQLTPDYTMD 136 Saccharomyces c...
P22326        70 VGGATGLIGDPSGKKAERTLNTAdivseWSQKIKNQLSRFLDF-------------EaaenPAVIANNFDWIGKMNVIDF 136 Bacillus subtil...
P75122        71 LGSGTALIGDPTGRMELRQMMSRetiaeNTRNIKKQIRRFLGS------------------NVVFCQNETWLKKLNYIEV 132 Mycoplasma pneu...
P48527       124 IGGATGKVGDPSGRKTERDVMENdirqsNVASISQQLQRFFKNgleyyrnrcalteDvpsgKYTPRNNFNWWKDIKMLDF 203 Saccharomyces c...
O29482        70 LADIHAYLNEKGTFEEIAEVAD--------YNKKVFIALGLDE-------------Sr----AKFVLGSEYQLSRDYVLD 124 Archaeoglobus f...
O27795        67 LADYHAYLNGKGSMERIRELAD--------YNQKCFLALGLSP-------------Er----TEFILGSSFQTEPEYTDL 121 Methanothermoba...
P36421        77 LADLHAFLDNMKAPLEVVNYRAK-----YYELTIKAILRSINV-------------Pie--kLKFVVGSSYQLTPDYTMD 136 Saccharomyces c...
WP_001569899  72 VGGATGLIGDPSFKAAERKLNTEetvqeWVDKIRKQVAPFLDF-------------DcgenSAIAANNYDWFGNMNVLTF 138 Escherichia coli
WP_010869488  71 LGSATALIGDPTGRIELRKILEEkeivkNTKTIKKQIKQFLG-------------------DVIIHENKVWLEKLNYIEV 131 Mycoplasma geni...
WP_014906672 102 IGDFTGKIGDPTGKSAARKQLTDeevqhNAKTYFEQFGKVLDP-------------E----KVELHYNSKWLKTLNLEDV 164 Bacillus subtilis
2DLC_X       137 IFRLSNIVSQNDAKRAGADVVKQVAn---PLLSGLIYPLMQALDEQFLDVD----CQFGGVDQ----RKIFVLAEENLPS 205 Saccharomyces c...
P22326       137 LRDVGKNFGINYMLAKDTVSSRIESg---ISYTEFSYMILQSYDFLNLYRDknckLQIGGSDQwgniTAGLELIRKSEEE 213 Bacillus subtil...
P75122       133 IRELGPCFSVNKMLATDAFSARWERg---LTLMELNYMVLQAYDFYYLNQKygvqLQIGGSDQwaniLAGADLIRRKTQK 209 Mycoplasma pneu...
P48527       204 LADFGRHIRVQSMLARDSISSRLQTkn-gLGFNEFTYQVLQAYDFYHLYKEenvtIQVGGNDQwgniTAGIDLINRIQPI 282 Saccharomyces c...
O29482       125 VLKMARITTLNRARRSMDEVSRRKEd---PMVSQMIYPLMQALDIAHLGVd----LAVGGIDQ----RKIHMLARENLPR 193 Archaeoglobus f...
O27795       122 VYRLALITTLLRAKRSMAQITRESRd---HKVAEVIYPLMQVIDMVYLGVd----VALGGMEQ----RKIHMLARENLPR 190 Methanothermoba...
P36421       137 IFRLSNIVSQNDAKRAGADVVKQVAn---PLLSGLIYPLMQALDEQFLDVd----CQFGGVDQ----RKIFVLAEENLPS 205 Saccharomyces c...
WP_001569899 139 LRDIGKHFSVNQMINKEAVKQRLNRedqgISFTEFSYNLLQGYDFACLNKQygvvLQIGGSDQwgniTSGIDLTRRLHQN 218 Escherichia coli
WP_010869488 132 IRELGAFFSVNKMLSTDAFSARWEKg---LTLMELNYMILQAYDFYYLHKNhnvtLQIGGSDQwaniLAGANLIKRKNNA 208 Mycoplasma geni...
WP_014906672 165 IELAGKI-TVARLMERDDFEERIAMqk-pISLHEFFYPLMQGYDSVVLESD----IELGGTDQhfnvLMGRHFQERYNKE 238 Bacillus subtilis
2DLC_X       206 ----LGYKKRAHLMNP----MVPGLAQGGKMSASDP-----NSKIDLLEEPKQVKKKINSAFCSPGN------------- 259 Saccharomyces c...
P22326       214 g--aKAFGLTIPLVTKad-gTKFGKTEGGAIWLDKEktspyEFYQFWINTDDRDVVKYLKYFTFLSKeeieayaek-tet 289 Bacillus subtil...
P75122       210 ----QVYGMTTNLLVKan-gEKMGKSASGALWLDPQktspyDFYQYWINLDDASLQKVFLMLTKLDTkaietlcn---lk 281 Mycoplasma pneu...
P48527       283 knkgLPFGITVPLLTTat-gEKFGKSAGNAVFIDPSintayDVYQFFYNTLDADVPKFLKIFTFLNSseikkivet-hik 360 Saccharomyces c...
O29482       194 l----gYSSPVCLHTP----ILVGLDGQ-KMSSSKG------NYISVRDPPEEVERKIRKAYCPAGV------------- 245 Archaeoglobus f...
O27795       191 l----gFDAPVCIHTP----LLHGTDGSEKMSSSKG------NFIAVDDSPDEIREKVKKSYCPMGE------------- 243 Methanothermoba...
P36421       206 l----gYKKRAHLMNP----MVPGLAQGGKMSASDP-----NSKIDLLEEPKQVKKKINSAFCSPGN------------- 259 Saccharomyces c...
WP_001569899 219 ----QVFGLTVPLITKad-gTKFGKTEGGAVWLDPKktspyKFYQFWINTADADVYRFLKFFTFMSIeeinaleee-dkn 292 Escherichia coli
WP_010869488 209 ----SVFGLTANLLVKan-gEKMGKTSSGALWLDENktsvfDFYQYWINLDDQSLKKTFLMLTMLDKkvidelcn---lk 280 Mycoplasma geni...
WP_014906672 239 ----KQVVILMPLLEGldgvEKMSKSKHNYIGINEhp---nDMYGKTMSLPDSLMKKYIHLATDLELeekkqlvkdletg 311 Bacillus subtilis
2DLC_X       260 ------VEENGLLSFVQYVIAPIQELKF----------G-----------TN-----------HFeFFIDRPEKFGGpIT 301 Saccharomyces c...
P22326       290 apekreAQKRLAEEVTSLVHGREALEQAinisqalfsgNikelsaqdvkvGF-----------KD-VPSMEVDSTQE-LS 356 Bacillus subtil...
P75122       282 gaaikeAKAKLAFELTDAIHGTKAALVAqaksa-------------rifaFQ-----------PD-TETKTVRAG---TR 333 Mycoplasma pneu...
P48527       361 spslryGQTLLAKEVTDMLYGVGSGSDSealsniifgrYdgtl---saakLV-----------DLcKKARILQYADReID 426 Saccharomyces c...
O29482       246 ------VEENPILDIAKYHILPRFGk----------------------------------------IVVERDAKFGGdVE 279 Archaeoglobus f...
O27795       244 ------TEGNPIIEIVKYFIMPEYGm----------------------------------------MTIRRPEKFGGdLE 277 Methanothermoba...
P36421       260 ------VEENGLLSFVQYVIAPIQELKFg---------------------TN-----------HFeFFIDRPEKFGGpIT 301 Saccharomyces c...
WP_001569899 293 sgkaprAQYVLAEQVTRLVHGEEGLQAAkriteclfsgS-----------LSalseadfeqlaQDgVPMVEMEKG---VD 358 Escherichia coli
WP_010869488 281 gpkikqTKQMLAFLITELIHGTKKAKEAqqrse--------------lifsN-----------QPdLDIKLVKTS---TN 332 Mycoplasma geni...
WP_014906672 312 avhprdAKMLLARTIVRMYHGEKAAEAAehsfktvfqeN-----------SL-----------PEdIPAVNWKGEKT-IA 368 Bacillus subtilis
2DLC_X       302 YKSFEEMKLAFKEEKLSPPDLKIG---VADAINELLEPIRQEFA-----------NN 344 Saccharomyces cerevisiae S288c
P22326       357 LVDVLVQSKLSPSKRQAREDIQNGavyINGERQTEINYTLSGEDr---------iEN 404 Bacillus subtilis subsp. subtilis str....
P75122       334 LVDVIVDLGLVVSRSEARRVIQQGgltINQEKVTDVEMVLQASS-----------Qp 379 Mycoplasma pneumoniae M129
P48527       427 LIKLICK-LVNCSVSEARRKLSQGsvyLHHSKSKVNENISNLAPfl--------iDD 474 Saccharomyces cerevisiae S288c
O29482       280 YASFEELAEDFKSGQLHPLDLKIA---VAKYLNMLLEDARKRLGvsv---------- 323 Archaeoglobus fulgidus DSM 4304
O27795       278 LELDELLEMYSSS-ELHPLDLKNA---VSDYLVDMLEPVREYMEgv----------- 319 Methanothermobacter thermautotrophicus...
P36421       302 YKSFEEMKLAFKEEKLSPPDLKIG---VADAINELLEPIRQEFAnnkefqeasekGY 355 Saccharomyces cerevisiae S288c
WP_001569899 359 LMQALVDSELQPSRGQARKTIASNaitINGEKQSDPEYFFKEEDr---------lFG 406 Escherichia coli
WP_010869488 333 LIDYLVETKFIKSKSEARRLISQKgltINNKHVLDLNQIIEWKE-----------EL 378 Mycoplasma genitalium
WP_014906672 369 MIDLLVKLKLLSSKSEARRMIQNGgvrIDGEKVTDVH---AKAE-----------IR 411 Bacillus subtilis
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