1F3M,2C30,2F57,1YHV,2Q0N,2CDZ,3FXZ


Conserved Protein Domain Family
STKc_PAK

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cd06614: STKc_PAK 
Click on image for an interactive view with Cn3D
Catalytic domain of the Serine/Threonine Kinase, p21-activated kinase
STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.
Statistics
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PSSM-Id: 270789
Aligned: 29 rows
Threshold Bit Score: 374.625
Created: 18-Jul-2006
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
Conserved site includes 22 residues -Click on image for an interactive view with Cn3D
Feature 1:ATP binding site [chemical binding site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1             #####   #            # #                                  #              
1F3M_C      21 KYTRFEKIGQGASGTVYTAMDvatGQEVAIRQMNLQqqp------kkELIINEILVMRENkNPNIVNYLDSYLVG--DEL 92   human
2CDZ_A      32 YLDNFIKIGEGSTGIVCIATVrssGKLVAVKKMDLRkqq------rrELLFNEVVIMRDYqHENVVEMYNSYLVG--DEL 103  human
XP_657512  191 FYSDFEKIGEGASGEVFSAKRkadGIVVALKQMEVNnd-------neKLIATEISLMKGCkHDNVVTFYEAFYLPakKLM 263  Entamoeba histol...
XP_761161 1370 VLCNLQMIGDGESGPVFAAHDvvkKRRVAIKVVRFAsdrdeepsarlLGLGKEVGIWRRCrHVNVLDLYSTVLTN--EAI 1447 Ustilago maydis 521
XP_657576  203 LFDNWQQIGEGVSGVVFQCVDkktKEERAVKKIKIEd---------dSINLQEIKIMQTLkHPNIVGFFGCFELD--NYL 271  Entamoeba histol...
XP_656447  130 IYENLEKIGEGGVGDVFRATRkvdGCEVALKRMRITkk-------skRAIVTEVTILNQYrHENVVTYIECYLIN--EML 200  Entamoeba histol...
EAY22235   160 LLQNMQVIAEGSTCIIYTAIYn--GIEVAVKEMHLNek-------keKYLLDETRLMYTMkDEHIIRFYDAYKDG--NTL 228  Trichomonas vagi...
XP_653898  148 FYENFSKIGEGAAGEVFVAQNkqtGKDMALKKCIITsk-------neKSLINEIEIMKNCkHPNIVSFFGSYLEE--GYV 218  Entamoeba histol...
XP_651523  197 LYKDYVPIGEGMSGVVFHCYEtstNKEVAMKKILIKn---------dSVNIQEIKIMQTLnQRNIVGYLGCYELD--NYL 265  Entamoeba histol...
XP_656956  102 NYENLAKTIYGDEDEYMATRKs-dGMEVSLRRMRITkk-------tkRAVVREVVVLSKCvNDNIVKYVECYLIN--DML 171  Entamoeba histol...
Feature 1         ##### ##  #                                          ## #         ##         
1F3M_C      93 WVVMEYLAgGSLTDVVTet----cmDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGmDGSVKLTDFGFCAQITP 168  human
2CDZ_A     104 WVVMEFLEgGALTDIVTht----rmNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLThDGRVKLSDFGFCAQVSK 179  human
XP_657512  264 WMSMEYMDgGCLTDILEnhdi-iemTEPQIAYVCRETLRALNFIHGLHCIHRDIKSDNMLLTnDGHVKLADFGYAAQLNQ 342  Entamoeba histol...
XP_761161 1448 WMVHELAE-RSLADVIAwkdagvdlNESRMSRIMGDLVEALQFLHAKRVLHRDVRSDNVMISsTGVCKLGDFTHAGELSA 1526 Ustilago maydis 521
XP_657576  272 YISMEFMDrNNLTAILEffps-vamNEPQIAYVARETNEALRYVHSFHRIHRDIKSDNILINhNGEVKLADFGVSVQLTK 350  Entamoeba histol...
XP_656447  201 WLVMEYMDgGCLTDIIDrhke-vplTEHFISFICTETLKALTYLHSFHCVHRDIKSDNLLLKkDGSIKLSDFGYAAQLTK 279  Entamoeba histol...
EAY22235   229 WIIMEYMDaGALTYVARyc----dcMEPHIAYIAREILLALKYIHSQNKIHRDIKTDNVLLSqKGHVKLADFGYAAQLTT 304  Trichomonas vagi...
XP_653898  219 WVVMEFMDsGCLTEVLTeyengfkmTEPQMAYVLREVMKGLLYLHQRHKIHRDIKSDNILISsDGSVKIGDFGYAAQLTS 298  Entamoeba histol...
XP_651523  266 YIAMEYMDrNNLTAMLDffpe-fslSERHIAYVVHESNTALKYLHSLHRIHRDIKSDNILLNhRGEIKLADFGISVQLTK 344  Entamoeba histol...
XP_656956  172 WLVTELMDaGELTNAIDlhpt-lpmKECHIAYVCKRVLQGLVYLHKMGIIHRDIKSDNILLHhKGTVKLSNFGFAAILTS 250  Entamoeba histol...
Feature 1                                                                                      
1F3M_C     169 EqskrSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPeklSAIFRD 248  human
2CDZ_A     180 EvprrKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLhkvSPSLKG 259  human
XP_657512  343 KqknrNTVVGTPYWMAPELIRGHDYGVKIDIWSLGIMVMEMAEGDPPYMEFPPLRALFLITTKGIPPLKNAekwSRDMNG 422  Entamoeba histol...
XP_761161 1527 GvstrHSVVGTPYWMAPEVIKAHKYDMRCDVWSLGVVLWEMIEGDPPRVEFPPLRAITLTATLGLPALRHAaslSHELKS 1606 Ustilago maydis 521
XP_657576  351 NkskrNTIVGTPYWMAPEVIKGKDYNCLIDVWSLGIMCREMMEGYPPYMDDPPLRALFQISTKGVPPITTGs-wSKELLD 429  Entamoeba histol...
XP_656447  280 QksnrTSIVGTPYWMAPELIRSQRYDEKVDIWSLGIMCMEMADGNPPYMDYPPMRALFLITTKGIPPLKDKekwSTLFNT 359  Entamoeba histol...
EAY22235   305 AaerrNSMVGTPFWMAPELIQRTPYSFAVDIWSLGILCRELAEGEPPYVDEPPMRATFLIVIKGIPEISDKesrSPELLD 384  Trichomonas vagi...
XP_653898  299 QrdkrNSIVGTPYWMAPEVIRNKLYDAKADIWSIGIMIMEMTEGDPPYMELPPLRALFLITTKGIPPLKERdswSPDLVK 378  Entamoeba histol...
XP_651523  345 RkskrNTVVGTPYWMAPEVIKGKDYGTNIDIWSLGIMCREMMEGVPPYIDDPPLRALFKISTKGIPPVQYGd-yTPTILD 423  Entamoeba histol...
XP_656956  251 AhpnrNSIVGTPFWMAPELIKSQNYDTKVDIWSLGITCREMADGTPPYMDFPPMKALFQITTKGIPPLEGIw--DDKFKN 328  Entamoeba histol...
Feature 1                                
1F3M_C     249 FLNRCLDMdVEKRGSAKELLQHQFLK 274  human
2CDZ_A     260 FLDRLLVRdPAQRATAAELLKHPFLA 285  human
XP_657512  423 FVARCLETiPDNRADSEELLQHPFMK 448  Entamoeba histolytica HM-1:IMSS
XP_761161 1607 FLHWATEMdAEKRPSAEMLAMSDFLA 1632 Ustilago maydis 521
XP_657576  430 YVNGCLSVnPDQRPSTESSVKNPFFQ 455  Entamoeba histolytica HM-1:IMSS
XP_656447  360 FVSDCLVLnPQLRKTSFEMIKHPFLE 385  Entamoeba histolytica HM-1:IMSS
EAY22235   385 FLDKCLRKdPKLRPTAEELLNHPFLK 410  Trichomonas vaginalis G3
XP_653898  379 LVESCLMKdPNQRPTSEQILESPFIA 404  Entamoeba histolytica HM-1:IMSS
XP_651523  424 FVDKCLTFdPTKRPDCEELDKDPFMS 449  Entamoeba histolytica HM-1:IMSS
XP_656956  329 FLNKCLNPdASKRASAEELLQDPFIS 354  Entamoeba histolytica HM-1:IMSS

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