Conserved Protein Domain Family
NTR_netrin-1_like

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cd03579: NTR_netrin-1_like 
NTR domain, Netrin-1-like subfamily; The C-terminal NTR domain of netrins is also called domain C in the context of C. elegans netrin UNC-6. Netrins are secreted proteins that function as tropic cues in the direction of axon growth and cell migration during neural development. These proteins may be chemoattractive to some neurons and chemorepellant for others. In the case of netrin-1, attraction and repulsion responses are mediated by the DCC and UNC-5 receptor families. The biological activities of C. elegans UNC-6, which may either attract or repel migrating cells or axons, are mediated by its different domains. The C-terminal NTR domain of UNC-6 has been shown to inhibit axon branching activity.
Statistics
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PSSM-Id: 239634
Aligned: 25 rows
Threshold Bit Score: -1
Created: 29-Mar-2006
Updated: 2-Oct-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
AAD09221     487 MKKYCKkDYAVQIHILKADKAG------------------------------------------------------DWWK 512 human
AAY23350     514 FKKYCRkDAVLLVTMQSREQHG------------------------------------------------------EMAR 539 Schmidtea medit...
NP_511154    545 LNKFCKrDYAIMAKVIGRDTSSeavsrevqrramdpdvadyemdqvqpgsarspitgvyefqaadypnpnpnprgsEMER 624 fruit fly
P34710       490 QKKFCKrDHAVQMVVVSREMVD------------------------------------------------------GWAK 515 Caenorhabditis ...
2497608      661 LNKFCMeDYAILAKVIGHDRASqdistek----------------------------------------fsierqnEIYK 700 fruit fly
EAL41255      63 LNKFCKrDYAIMAKVIGKDTKPsdsgtgkgs-------------------------------------tgsgnpsqPYQP 105 Anopheles gambi...
BAB68352     555 LGKFCRmGYAVVVQVTGKLTLR------------------------------------------------------RKTR 580 Ciona savignyi
XP_969939    504 LNKYCKrDYAIMARVLSRMEGNedq------------------------------------------------htkGWTR 535 red flour beetle
EAT45711     509 LSKFCKrDYVIMAKVTAKDTKPdnanlksn--------------------------------------pnhspnsnDVVK 550 yellow fever mo...
XP_001120123  14 LNKYCKrDYAILGRITDRHKKNdgssag------------------------------------------tsvsgsVWIR 51  honey bee
AAY23350     514 FKKYCRkDAVLLVTMQSREQHG------------------------------------------------------EMAR 539 Schmidtea medit...
NP_511154    545 LNKFCKrDYAIMAKVIGRDTSSeavsrevqrramdpdvadyemdqvqpgsarspitgvyefqaadypnpnpnprgsEMER 624 fruit fly
P34710       490 QKKFCKrDHAVQMVVVSREMVD------------------------------------------------------GWAK 515 Caenorhabditis ...
2497608      661 LNKFCMeDYAILAKVIGHDRASqdistek----------------------------------------fsierqnEIYK 700 fruit fly
EAL41255      63 LNKFCKrDYAIMAKVIGKDTKPsdsgtgkgs-------------------------------------tgsgnpsqPYQP 105 Anopheles gambi...
BAB68352     555 LGKFCRmGYAVVVQVTGKLTLR------------------------------------------------------RKTR 580 Ciona savignyi
XP_969939    504 LNKYCKrDYAIMARVLSRMEGNedq------------------------------------------------htkGWTR 535 red flour beetle
EAT45711     509 LSKFCKrDYVIMAKVTAKDTKPdnanlksn--------------------------------------pnhspnsnDVVK 550 yellow fever mo...
XP_001120123  14 LNKYCKrDYAILGRITDRHKKNdgssag------------------------------------------tsvsgsVWIR 51  honey bee
AAD09221     513 FTVNIISVYKQGTs-------------------rIRRGDQSLWIRs-rDIACKCPKIKPLKKYLLLGNAEdsp----dqs 568 human
AAY23350     540 FEMKVNYVYRIDTskftemhpdflasmngimsnqFIHSTFPMWIKe-tDLKCKCPSLQLGMTYLVILKLHaiky--lers 616 Schmidtea medit...
NP_511154    625 FDLQIQAVFKRSRpgessgagn----vygmpnttLKRGPMTWIIPt-kDLECRCPRIRVNRSYLILGRDSeap-----pg 694 fruit fly
P34710       516 YKIVVESVFKRGTe-------------------nMQRGETSLWISp-qGVICKCPKLRVGRRYLLLGKNDsdh----erd 571 Caenorhabditis ...
2497608      701 YEINIQTIFKRNPmsgt-------------tsslLGRGNMMLLVPr-kSIECQCPKIKLNKSYLILGRDSeaa-----pg 761 fruit fly
EAL41255     106 PPPRVQKVFKRSRspasp------------lakaSKWSDVPYIVSa-hDLDCRCPKLKVHRSYLILGNESegp-----ag 167 Anopheles gambi...
BAB68352     581 FTLQLHKTYKRGVv-------------------rFRKKERVDVEVrdrIVHCLCPKLQVKKTYLLIGKYNrsg----gep 637 Ciona savignyi
XP_969939    536 FMVNIEFIYKKSRds------------------qIRKGTMPMVVPt-aDLACKCPKLKPSKSYLFLGREKddspggvltg 596 red flour beetle
EAT45711     551 FTLSVQKVFKRSPspnsp------------lalsLRRSTHVRLVVevkDLECRCPRIKVNKSYLILGRDTegp-----pg 613 yellow fever mo...
XP_001120123  52 FTLNVDFIYKKSPns------------------rIRRGDVFLYVHs-aDLACRCPKIKPNRSYLILGQESdgg----gqg 108 honey bee
AAY23350     540 FEMKVNYVYRIDTskftemhpdflasmngimsnqFIHSTFPMWIKe-tDLKCKCPSLQLGMTYLVILKLHaiky--lers 616 Schmidtea medit...
NP_511154    625 FDLQIQAVFKRSRpgessgagn----vygmpnttLKRGPMTWIIPt-kDLECRCPRIRVNRSYLILGRDSeap-----pg 694 fruit fly
P34710       516 YKIVVESVFKRGTe-------------------nMQRGETSLWISp-qGVICKCPKLRVGRRYLLLGKNDsdh----erd 571 Caenorhabditis ...
2497608      701 YEINIQTIFKRNPmsgt-------------tsslLGRGNMMLLVPr-kSIECQCPKIKLNKSYLILGRDSeaa-----pg 761 fruit fly
EAL41255     106 PPPRVQKVFKRSRspasp------------lakaSKWSDVPYIVSa-hDLDCRCPKLKVHRSYLILGNESegp-----ag 167 Anopheles gambi...
BAB68352     581 FTLQLHKTYKRGVv-------------------rFRKKERVDVEVrdrIVHCLCPKLQVKKTYLLIGKYNrsg----gep 637 Ciona savignyi
XP_969939    536 FMVNIEFIYKKSRds------------------qIRKGTMPMVVPt-aDLACKCPKLKPSKSYLFLGREKddspggvltg 596 red flour beetle
EAT45711     551 FTLSVQKVFKRSPspnsp------------lalsLRRSTHVRLVVevkDLECRCPRIKVNKSYLILGRDTegp-----pg 613 yellow fever mo...
XP_001120123  52 FTLNVDFIYKKSPns------------------rIRRGDVFLYVHs-aDLACRCPKIKPNRSYLILGQESdgg----gqg 108 honey bee
AAD09221     569 GIVADKSSLVIQWRDTWARRLRKFQQREkkgKC 601 human
AAY23350     617 ELLLDQKSVALPWQKTWERRMKKFSNKEhqgLC 649 Schmidtea mediterranea
NP_511154    695 YLGIGPHSIVIEWKEDWYRRMKRFQRRAr--TC 725 fruit fly
P34710       572 GLMVNPQTVLVEWEDDIMDKVLRFSKKDklgQC 604 Caenorhabditis elegans
2497608      762 YLAIGPSSVVLEWKDEWSLRMKRFQRRAr--KC 792 fruit fly
EAL41255     168 TLGVGPRTILIEWRDEWHRRLRKFQRQAd-rTC 199 Anopheles gambiae str. PEST
BAB68352     638 RLAIDKGTIVMEWKNKYKRRLRSLQRRArrrKC 670 Ciona savignyi
XP_969939    597 SLGVTERSIVIEWRDEWDQRMRRFRRRAr--KC 627 red flour beetle
EAT45711     614 ALGIGPRSIVIEWRDEWHRRLRKFQRQAa-rTC 645 yellow fever mosquito
XP_001120123 109 GLTVTQRSIVIEWRDEWHRRMRRFQRRAk--SC 139 honey bee
AAY23350     617 ELLLDQKSVALPWQKTWERRMKKFSNKEhqgLC 649 Schmidtea mediterranea
NP_511154    695 YLGIGPHSIVIEWKEDWYRRMKRFQRRAr--TC 725 fruit fly
P34710       572 GLMVNPQTVLVEWEDDIMDKVLRFSKKDklgQC 604 Caenorhabditis elegans
2497608      762 YLAIGPSSVVLEWKDEWSLRMKRFQRRAr--KC 792 fruit fly
EAL41255     168 TLGVGPRTILIEWRDEWHRRLRKFQRQAd-rTC 199 Anopheles gambiae str. PEST
BAB68352     638 RLAIDKGTIVMEWKNKYKRRLRSLQRRArrrKC 670 Ciona savignyi
XP_969939    597 SLGVTERSIVIEWRDEWDQRMRRFRRRAr--KC 627 red flour beetle
EAT45711     614 ALGIGPRSIVIEWRDEWHRRLRKFQRQAa-rTC 645 yellow fever mosquito
XP_001120123 109 GLTVTQRSIVIEWRDEWHRRMRRFQRRAk--SC 139 honey bee
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