1NHY


Conserved Protein Domain Family
GST_N_EF1Bgamma

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cd03044: GST_N_EF1Bgamma 
Click on image for an interactive view with Cn3D
GST_N family, Gamma subunit of Elongation Factor 1B (EFB1gamma) subfamily; EF1Bgamma is part of the eukaryotic translation elongation factor-1 (EF1) complex which plays a central role in the elongation cycle during protein biosynthesis. EF1 consists of two functionally distinct units, EF1A and EF1B. EF1A catalyzes the GTP-dependent binding of aminoacyl-tRNA to the ribosomal A site concomitant with the hydrolysis of GTP. The resulting inactive EF1A:GDP complex is recycled to the active GTP form by the guanine-nucleotide exchange factor EF1B, a complex composed of at least two subunits, alpha and gamma. Metazoan EFB1 contain a third subunit, beta. The EF1B gamma subunit contains a GST fold consisting of an N-terminal TRX-fold domain and a C-terminal alpha helical domain. The GST-like domain of EF1Bgamma is believed to mediate the dimerization of the EF1 complex, which in yeast is a dimer of the heterotrimer EF1A:EF1Balpha:EF1Bgamma. In addition to its role in protein biosynthesis, EF1Bgamma may also display other functions. The recombinant rice protein has been shown to possess GSH conjugating activity. The yeast EF1Bgamma binds membranes in a calcium dependent manner and is also part of a complex that binds to the msrA (methionine sulfoxide reductase) promoter suggesting a function in the regulation of its gene expression.
Statistics
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PSSM-Id: 239342
Aligned: 34 rows
Threshold Bit Score: 73.0571
Created: 1-Mar-2005
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
Conserved site includes 6 residues -Click on image for an interactive view with Cn3D
Feature 1:putative GSH binding site (G-site) [chemical binding site]
Evidence:
  • Comment:The GST active site is composed of a GSH binding site (G-site), common to all GSTs, and a xenobiotic binding site (H-site), which varies between different classes and isotypes. Residues from the N-terminal TRX-fold domain form the G-site while the H-site is comprised mainly of residues from the C-terminal alpha helical domain.
  • Comment:Based on similarity with other GST family members.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                 #                                          ###           ##         
1NHY_A      4 GTLYANFR---IRTWVPRGLVKALKLDVKVVTPdaa-------aeQFARDF-PLKKVPAFVGPkGYKLTEAXAINYYLVK 72  baker's yeast
P40921      4 GTVYGKIGs--PRVLFCVSVAAVAGVEVEHVDVqphn-----fpaDLAAKF-PLQKMPVFVGKdGFPLSETLAIAFYLAS 75  fission yeast
CAA21082    4 GTLYSFKTn--TRTVCLLELAKLLDLQVDLVETyphk-----fsaDLAAKF-PLQKLPVFIGAdGFELSEVIAIVKYFYE 75  fission yeast
CAC35543    3 YKLLAPLHpesARAQKIMVAAAYANVDVELKVCqygqe---netpEFARNCsPCMRFPSMQTE-EGYLFESNAIMRHIAR 78  Leishmania infantum
O04487      3 LVLHTYKGn--KSAEKALIAAEYVGVQIDVPSDfqmgv--tnktpAFLKMN-PIGKVPVLETP-EGSVFESNAIARYVSR 76  thale cress
Q9ZRI7      3 LVLHTFDGn--KNAFKALIAAEYSGVKVELAKNfqmgv--snktpEYLKMN-PIGKVPILETP-DGPVFESNAIARYVTR 76  rice
NP_705282  26 YKLLAPKNd--VRTLKVQTVASFCNVKLNMPNFelgkd---nktaDFLKHS-PLGRLPVLVTS-HGSIFESNAVCKYLCS 98  Plasmodium falcipa...
EAA57903    4 GKLYGRPDn--TRTIAVLVAAKHNDLELELVETqanpaadfnksdAYTKIQ-PLGKIPAFEGAnGFTLSEVIAIAVYVTS 80  Aspergillus nidula...
AAS55635    3 LTLYTGAHpenARSQKVCVAAAFAGLDLDIHYCtygve---netvDFARNLsPCMRFPAMQTE-EGAIFESNAIMRHIAR 78  Crithidia fasciculata
EAK83480    5 GQIYGFAGh--FKVNRVLAAAAYNGVELEIVETqamkg--dtkkpEFTALF-PYGKIPAFKGTdGFSLTEGRAIARYVAG 79  Ustilago maydis 521
Feature 1      
1NHY_A     73 L 73  baker's yeast
P40921     76 L 76  fission yeast
CAA21082   76 K 76  fission yeast
CAC35543   79 V 79  Leishmania infantum
O04487     77 L 77  thale cress
Q9ZRI7     77 S 77  rice
NP_705282  99 I 99  Plasmodium falciparum 3D7
EAA57903   81 Q 81  Aspergillus nidulans FGSC A4
AAS55635   79 C 79  Crithidia fasciculata
EAK83480   80 L 80  Ustilago maydis 521

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