Conserved Protein Domain Family
rplF

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PRK05498: rplF 
50S ribosomal protein L6; Validated
Statistics
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PSSM-Id: 235495
View PSSM: PRK05498
Aligned: 928 rows
Threshold Bit Score: 182.954
Threshold Setting Gi: 32491307
Created: 9-Dec-2010
Updated: 17-Jan-2013
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

PRK05498 is a member of the superfamily cl28155.
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 220906733   1 MSRIGKRPIPIPDKVAVTIDGSTVKVKGPKGELSQVLPPEVVVVQENSSLLVNRRDDSRPARQRHGLSRTLVANMVKGVT 80
gi 218702067   1 MSRVAKAPVVVPAGVDVKINGQVITIKGKNGELTRTLNDAVEVKHADNTLTFGPRDGYADGWAQAGTARALLNSMVIGVT 80
gi 218691591   1 MSRVAKAPVVVPAGVDVKINGQVITIKGKNGELTRTLNDAVEVKHADNTLTFGPRDGYADGWAQAGTARALLNSMVIGVT 80
gi 253771871   1 MSRVAKAPVVVPAGVDVKINGQVITIKGKNGELTRTLNDAVEVKHADNTLTFGPRDGYADGWAQAGTARALLNSMVIGVT 80
gi 254163233   1 MSRVAKAPVVVPAGVDVKINGQVITIKGKNGELTRTLNDAVEVKHADNTLTFGPRDGYADGWAQAGTARALLNSMVIGVT 80
gi 24114583    1 MSRVAKAPVVVPAGVDVKINGQVITIKGKNGELTRTLNDAVEVKHADNTLTFGPRDGYADGWAQAGTARALLNSMVIGVT 80
gi 30065394    1 MSRVAKAPVVVPAGVDVKINGQVITIKGKNGELTRTLNDAVEVKHADNTLTFGPRDGYADGWAQAGTARALLNSMVIGVT 80
gi 82545668    1 MSRVAKAPVVVPAGVDVKINGQVITIKGKNGELTRTLNDAVEVKHADNTLTFGPRDGYADGWAQAGTARALLNSMVIGVT 80
gi 187734172   1 MSRVAKAPVVVPAGVDVKINGQVITIKGKNGELTRTLNDAVEVKHADNTLTFGPRDGYADGWAQAGTARALLNSMVIGVT 80
gi 82778601    1 MSRVAKAPVVVPAGVDVKINGQVITIKGKNGELTRTLNDAVEVKHADNTLTFGPRDGYADGWAQAGTARALLNSMVIGVT 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 220906733  81 EGFRKNMQIVGVGYRLQVTGNKLAITAGYSHPVEIDLPKGISVEVDQKAvpiaNsksqqgfnFGVIGIDKQAVGDVAALI 160
gi 218702067  81 EGFTKKLQLVGVGYRAAVKGNVINLSLGFSHPVDHQLPAGITAECPTQT----E--------IVLKGADKQVIGQVAADL 148
gi 218691591  81 EGFTKKLQLVGVGYRAAVKGNVINLSLGFSHPVDHQLPAGITAECPTQT----E--------IVLKGADKQVIGQVAADL 148
gi 253771871  81 EGFTKKLQLVGVGYRAAVKGNVINLSLGFSHPVDHQLPAGITAECPTQT----E--------IVLKGADKQVIGQVAADL 148
gi 254163233  81 EGFTKKLQLVGVGYRAAVKGNVINLSLGFSHPVDHQLPAGITAECPTQT----E--------IVLKGADKQVIGQVAADL 148
gi 24114583   81 EGFTKKLQLVGVGYRAAVKGNVINLSLGFSHPVDHQLPAGITAECPTQT----E--------IVLKGADKQVIGQVAADL 148
gi 30065394   81 EGFTKKLQLVGVGYRAAVKGNVINLSLGFSHPVDHQLPAGITAECPTQT----E--------IVLKGADKQVIGQVAADL 148
gi 82545668   81 EGFTKKLQLVGVGYRAAVKGNVINLSLGFSHPVDHQLPAGITAECPTQT----E--------IVLKGADKQVIGQVAADL 148
gi 187734172  81 EGFTKKLQLVGVGYRAAVKGNVINLSLGFSHPVDHQLPAGITAECPTQT----E--------IVLKGADKQVIGQVAADL 148
gi 82778601   81 EGFTKKLQLVGVGYRAAVKGNVINLSLGFSHPVDHQLPAGITAECPTQT----E--------IVLKGADKQVIGQVAADL 148
                        170       180
                 ....*....|....*....|....*....
gi 220906733 161 RAVRPLEPYKGKGIRYATETLRLKAGKTG 189
gi 218702067 149 RAYRRPEPYKGKGVRYADEVVRTKEAKKK 177
gi 218691591 149 RAYRRPEPYKGKGVRYADEVVRTKEAKKK 177
gi 253771871 149 RAYRRPEPYKGKGVRYADEVVRTKEAKKK 177
gi 254163233 149 RAYRRPEPYKGKGVRYADEVVRTKEAKKK 177
gi 24114583  149 RAYRRPEPYKGKGVRYADEVVRTKEAKKK 177
gi 30065394  149 RAYRRPEPYKGKGVRYADEVVRTKEAKKK 177
gi 82545668  149 RAYRRPEPYKGKGVRYADEVVRTKEAKKK 177
gi 187734172 149 RAYRRPEPYKGKGVRYADEVVRTKEAKKK 177
gi 82778601  149 RAYRRPEPYKGKGVRYADEVVRTKEAKKK 177
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