Conserved Protein Domain Family
XynC

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COG5520: XynC (this model, PSSM-Id:227807 is obsolete and has been replaced by 444271)
O-Glycosyl hydrolase [Cell wall/membrane/envelope biogenesis]
Statistics
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PSSM-Id: 227807
Aligned: 5 rows
Threshold Bit Score: 564.908
Created: 7-Oct-2002
Updated: 2-Oct-2020
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
15004821   1 MKNKIKK-IVLSVVTFS---------------------MICLPFTDGFTSIKAAS-NVMVNLASKKQVIRGFGG--MNSV 55  Clostridium acetobu...
16078876   1 MIPRIKKtICVLLVCFT---------------------MLSVMLGPGATEVLAAS-DVTVNVSAEKQVIRGFGG--MNHP 56  Bacillus subtilis
15004822   1 MNIKLKR-TLISLVAFS---------------------MTCLPFVGTGSSVKAASnDATINVAAKHQTIRGFG----ASS 54  Clostridium acetobu...
16126001   1 MRLRLLSiTVAALAATSpvlaapklrawvttgdksqllAAQAPVAASSAEALAGLpVIAVDAQERHQSIVGFGAsiTDAS 80  Caulobacter crescen...
16767672   1 MKGRLIS--SDPYRQQF----------------------LVERAVSFSHRQRDCSeLISVLPRHALQQIDGFGGs-FTEG 55  Salmonella typhimur...
15004821  56 AWAGDLT------AAQRETAFGNGNNQLGLSVVRIFVDDNK----------------NNWYKELPTAKS----------- 102 Clostridium acetobu...
16078876  57 AWAGDLT------AAQRETAFGNGQNQLGFSILRIHVDENR----------------NNWYKEVETAKS----------- 103 Bacillus subtilis
15004822  55 AWCGALS------DTCMDTLYKN----AGLDILRVRIAPNEgwnr---------gdyRAWADELSNAKK----------- 104 Clostridium acetobu...
16126001  81 AWLIQNKlkpadrDALLRELFGRGAGGLGFSFTRVTIGASDfsldhyslndtpdgapDPELKHFSLARPkqhvfptvraa 160 Caulobacter crescen...
16767672  56 AGVVFNSmsektkAQFLSLYFSAQ--EHNYTLARMPIQSCDfslgnya---yvdssaDLQQGRLSFSRDeahliplisga 130 Salmonella typhimur...
15004821 103 -AIAHGSIVFATPWNPPSSMTETFNRNGE-KAKRLRYDKYGDYAKYLNDFVSYMKNNGVNLYAISVQNEPDYG---RDWT 177 Clostridium acetobu...
16078876 104 -AVKHGAIVFASPWNPPSDMVETFNRNGDtSAKRLKYNKYAAYAQHLNDFVTFMKNNGVNLYAISVQNEPDYA---HEWT 179 Bacillus subtilis
15004822 105 -VRARGGIVFATPWTPPASMKTNNTTTGA-NKGSLKPSSYAAYAAYLKTFVKYMSDNGAPLYALSLQNEPDWAp-dYDAC 181 Clostridium acetobu...
16126001 161 lKINPELKVMASPWSAPAWMKTTGSLLKG----QLKAEAYPVYATFFARYVQEAAKVGVPTDYLSVQNEPDFEpenYPGM 236 Caulobacter crescen...
16767672 131 lRLNPHMKLMASPWSPPAFMKTNNDMNGG---GKLRRECYADWADIIINYLLEYRRHGINVQALSVQNEPVAVk-tWDSC 206 Salmonella typhimur...
15004821 178 WWTPQEVLRFMRDYAGSIN-------CRVMSPESFSY-QKNMYDPILNDPKALANMDILGTHTYGTQVKDFPYPLFKQKA 249 Clostridium acetobu...
16078876 180 WWTPQEILRFMRENAGSIN-------ARVIAPESFQY-LKNLSDPILNDPQALANMDILGTHLYGTQVSQFPYPLFKQKG 251 Bacillus subtilis
15004822 182 TWTAQQFHDFLKQYGASLSs-----tIKIIMPESLGF-NPAMSDPTLNDPTTAQYVSIIGGHLYGSPIRDYPLARNK--- 252 Clostridium acetobu...
16126001 237 RWLPQDRARFFGEHLAPVFkrd-kikTRVLDWDHNWD-QPQQPLTVLADPKARAFLTGVAWHCYAGEVSAQDKVRAAYP- 313 Caulobacter crescen...
16767672 207 LYSVEEETAFAVQYLRPRLarqgmdeMEIYIWDHDKDgLVDWAELAFADEANYKGINGLAFHWYTGDHFSQIQYLAQCLP 286 Salmonella typhimur...
15004821 250 AGKDLWMTEVYVPNSDANSADRwpEALEVANHINNAMVEGDFQAYVWWYIRRSYGLIKENGAIS--KRGYMMAHFSKFVR 327 Clostridium acetobu...
16078876 252 AGKDLWMTEVYYPNSDTNSADRwpEALDVSQHIHNAMVEGDFQAYVWWYIRRSYGPMKEDGTIS--KRGYNMAHFSKFVR 329 Bacillus subtilis
15004822 253 -GKDIWMTEHYLEGNDP-G-----TCVKLAKEIHDCMTIGNMNAYVYWWISGDQNGLYNTRTNEtyKKTYVMGQFSKFIG 325 Clostridium acetobu...
16126001 314 -DKEVFFTECSGGEWAPKFDD---SFAWMVEQLIIGSTRGGARGVLMWNLALDEKFGPHAGGCG---D--CRGVVSIDSQ 384 Caulobacter crescen...
16767672 287 DKKLLFSEGCVPMESDAGSQIR---HWHTYLHDMIGNFKSGCSGFIDWNLLLNSEGGPNHQGNL------CEAPIQYDAQ 357 Salmonella typhimur...
15004821 328 PGYVRVDATKNPVGNVYVSAYTGNNKVVIVAINKGTYPVNQSFNIQNSTVSNVSSWVTSGTLNMAKTnSNINAANGRFNA 407 Clostridium acetobu...
16078876 330 PGYVRIDATKNPNANVYVSAYKGDNKVVIVAINKSNTGVNQNFVLQNGSASNVSRWITSSSSNLQPG-TNLTVSGNHFWA 408 Bacillus subtilis
15004822 326 NGYSRVDATNSPQSNVYVSAYTGNNKVVIVAINQGTYPVNQSFNVQNSTVSNVSSWVSSGTLNMAKTnSNISAANGRFNA 405 Clostridium acetobu...
16126001 385 TG--ALTRTQEYYAFGHASRFVKPDAVRIGSPAK--VEGLRTVAFQNPDGQRVLIVLNVSTAAVDFA---IASAGARFKA 457 Caulobacter crescen...
16767672 358 ND--VLRRNHSWYGIGHFCRYVRPGARVMLSSSY--DNLLEEVGFVNPDGERVLVVYNRDVQERRCR---VLDGDKEIAL 430 Salmonella typhimur...
15004821 408 SLPAQSVTTFVADLNST 424 Clostridium acetobutylicum
16078876 409 HLPAQSVTTFVVNR--- 422 Bacillus subtilis
15004822 406 SLPAQSVTTFVADLNST 422 Clostridium acetobutylicum
16126001 458 SLPARSAGTFVW----- 469 Caulobacter crescentus CB15
16767672 431 TLPPSGASTLLWRQESI 447 Salmonella typhimurium LT2
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