Conserved Protein Domain Family
SPT5

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COG5164: SPT5 (this model, PSSM-Id:227493 is obsolete and has been replaced by 444063)
Transcription elongation factor [Transcription]
Statistics
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PSSM-Id: 227493
Aligned: 3 rows
Threshold Bit Score: 747.22
Created: 7-Oct-2002
Updated: 23-Jan-2015
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
134853    441 TFAHRAPPQLFNPTMALRLDQANLYKRDDRHFTYKNEDYIDGYLYKSFRIQHVETKNIQPTVEELARFGSKEGA-VDLTS 519  baker's yeast
19074993   41 kltqeleekyasipedeeieeetvehgikqanlvpkntspRLFIVRVKRGSEREILMRIIENDPKNVFSIICKDgLKGYL 120  Encephalitozoon c...
19114103  382 NSATRPQARLFNESEAFKSNPSKFSKRGPRLFLFNNEEFEDGFLVKDIRISSLITEGVNPTLDEVSKFNPNNED-LDLSS 460  fission yeast
134853    520 VSQSIKKAQAAkvtFQPGDRIEVLNGEQRGSKGIVTRTTKDIATIKLNgFTTPLEFPISTLRKIFEPGDHVTVING-EHQ 598  baker's yeast
19074993  121 YVEAFQKQHVV-------DALESLRGVSRSRVSVVP-QKEMIEAMTYH--EQRICGEWGRIRNGKYKNDLAKIIESdGEM 190  Encephalitozoon c...
19114103  461 LALSVKGGHAE---FQPGDHVEVYVGEQTGVSGVVENVRGSVITMVSS-DGLRLDVPSRGLRKRFRHGDYVKVIAG-KYK 535  fission yeast
134853    599 GDAGLVLMVEQGQVTFMSTQTSREVTITANNLSKSIDTTATSSEYALHDIVELSAKNVACIIQAGHDIFKVIDETGKVST 678  baker's yeast
19074993  191 VRIRTIPRIDGEKKLFNPENFKSGSVIKSRGY----------YIYKRDTYVDGFLEKDVLKNSIDFDVEPTFEELEEFHQ 260  Encephalitozoon c...
19114103  536 DDTGMVVRISKDEVTFLSDTLMTELTVFSRDLGEASSAQAVNSAYELHDLVQLDVNTVACIFSVDRDTYKVIDQNGGVRT 615  fission yeast
134853    679 ITKGSILSKINTARARVSSVDANGNEIKIGDTIVEKVGSRREGQVLYIQTQQIFVVSKKIVENAGVFVVNPSNVEAVASK 758  baker's yeast
19074993  261 ACPISVGDKVRVTRGELIGMKGVVRSISGTIAVVESRDGKFEVQSSGLVKHFDLGETVSYKGENGVVVKIEGKDCIVATR 340  Encephalitozoon c...
19114103  616 VLASQITMRHSNRRG--VATDRNGAEIRIGDKVKEVGGEGKQGTILHIYRAFVFLHNRDIAENNGVFSARSRNVATIAAK 693  fission yeast
134853    759 DNMLSNKMDLSKMNPEIISKMGPPSSKTFQQPIqsrGGREVALGKTVRIRSAGYKGQLGIVKDVNGDKATVELHSKNKHI 838  baker's yeast
19074993  341 DFTEELKVSIDDLKAPVTVNLQNEKTNELERKK---VRRDPLINKEVQIQCGEYKGHGGVVKEVDRNICRIQLNSNMKFV 417  Encephalitozoon c...
19114103  694 GARIS--ADLTKMNPALSNGPALPPVANLKRTI----GRDKAIGATVRIRRGPMKGLLGVIKDTTDANARVELHTGNKMV 767  fission yeast
134853    839 TIDKHKLTYYNREGgEGITYDELVNRRGRVPQARMGPSYVSAPRNMATGG---IAAGAAATSSGLSGGMTPGWSsfDGGK 915  baker's yeast
19074993  418 TVEKSRIAVLGREG--------------LSKPLRYSEAIGSKTPGYKTPG-----------------YRTPGYK---TPS 463  Encephalitozoon c...
19114103  768 TIPKENLLYTTKTG-ELISYTEFIERSRGIRPGSISTADGPNVPNWAQGArtpAVANGSRTPAWNTGSRTPAWN--SGSK 844  fission yeast
134853    916 TPAVN----AHGGSGGGGVSSWGGASTWGGQGNGGASAWGGAGGGASAWG-GQGTGATSTWGGASAWGNKSSWGGASTWA 990  baker's yeast
19074993  464 ACALE----DPGIDWLDEKDNPYKGTLIHALGKELALEDYRDGLFMTKDK---AFSVSEISFVQPRKNDLVCVLDGEKKG 536  Encephalitozoon c...
19114103  845 TPAWNsgsrTPAWNSGNKTPAWNAGSRTPAWNSGNKTPAWNVGNKTPAWNsGAKTPAWNAGNKTPSWNNGTKTPAWNANQ 924  fission yeast
134853    991 SGGESNGAMSTWGGTGDRSAYGGASTWGGNNNNKSTRDGGASAWGNQDDGNRSAWnnQGNKSNYGGNST 1059 baker's yeast
19074993  537 TCGILIAINGDFG--VIRSTKGSVVHLPMNDLSRKIY-------------------------------- 571  Encephalitozoon cuniculi
19114103  925 TPMVANGTNTSWGQTPAYGGFS-ETNWDTEDNSKPYTAPTPGAWAAPTPGGWDDE--EGDSPKYVPPSP 990  fission yeast
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