Conserved Protein Domain Family
YesR

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COG4225: YesR 
Rhamnogalacturonyl hydrolase YesR [Carbohydrate transport and metabolism]
Statistics
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PSSM-Id: 226678
Aligned: 9 rows
Threshold Bit Score: -1
Created: 7-Oct-2002
Updated: 2-Oct-2020
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
15890425  29 KRNSQMTQPSMEKDTLRTTIDNVAAAFSRLKgiqeglvsdgsdgkiqfDEWDWEVGVGLYGFLRRALAANDQKALDDLVT 108 Agrobacterium tumef...
15891801   1 -----MRKAMKATEYFDQFSRRYKHYKG--------------------GSWCYEDGCVYRGLQQLLEATGEARWNDHLHR 55  Agrobacterium tumef...
15613048   1 MSTLSVATMAVAEQACQTMMKRYEPLELPPK-----------------NRWHYHQGVFLYGMYRVWEATKKEEYLSYTKG 63  Bacillus halodurans
15613683   1 -----MKRVQFDREDVLQKIDRIVNRTFEMD-----------------HVWDWPAGVAFYGVGLAYEATKKDAYLQRLKE 58  Bacillus halodurans
16077767   1 -----MAQLIFDEEKVTSVIDRIVKRTFQMD-----------------FAWDWPGGVAFYGVAEAYEATENEEYINLLKT 58  Bacillus subtilis
16080064   6 QSIAVKSPLTYAEALANTIMNTYTVEELPPA-----------------NRWHYHQGVFLCGVLRLWEATGEKRYFEYAKA 68  Bacillus subtilis
15893650   1 -----------MQKYSKLMADSIIAKNITLT-----------------DHWGYEYGLTLDGIAKVYEWTKDKKYLDFIIK 52  Clostridium acetobu...
16765253  28 VQKVTHNLVNIKDETGEFLLRLDDGRVIDTKg---------------wAGWEWTHGVGLYGMYHYYQQTGDQTMRKIIDD 92  Salmonella typhimur...
16121148  10 TQQARETMKRVYRYQAANQTRSVIRRSGKTRf---------------iKDTDWERGVFWSCVAAAWLATDDAEYLEGVMN 74  Yersinia pestis
15891801   1 -----MRKAMKATEYFDQFSRRYKHYKG--------------------GSWCYEDGCVYRGLQQLLEATGEARWNDHLHR 55  Agrobacterium tumef...
15613048   1 MSTLSVATMAVAEQACQTMMKRYEPLELPPK-----------------NRWHYHQGVFLYGMYRVWEATKKEEYLSYTKG 63  Bacillus halodurans
15613683   1 -----MKRVQFDREDVLQKIDRIVNRTFEMD-----------------HVWDWPAGVAFYGVGLAYEATKKDAYLQRLKE 58  Bacillus halodurans
16077767   1 -----MAQLIFDEEKVTSVIDRIVKRTFQMD-----------------FAWDWPGGVAFYGVAEAYEATENEEYINLLKT 58  Bacillus subtilis
16080064   6 QSIAVKSPLTYAEALANTIMNTYTVEELPPA-----------------NRWHYHQGVFLCGVLRLWEATGEKRYFEYAKA 68  Bacillus subtilis
15893650   1 -----------MQKYSKLMADSIIAKNITLT-----------------DHWGYEYGLTLDGIAKVYEWTKDKKYLDFIIK 52  Clostridium acetobu...
16765253  28 VQKVTHNLVNIKDETGEFLLRLDDGRVIDTKg---------------wAGWEWTHGVGLYGMYHYYQQTGDQTMRKIIDD 92  Salmonella typhimur...
16121148  10 TQQARETMKRVYRYQAANQTRSVIRRSGKTRf---------------iKDTDWERGVFWSCVAAAWLATDDAEYLEGVMN 74  Yersinia pestis
15890425 109 WYGWQIDRG-------LPPRQINSSAPMLPLVILTEHVDRPDFRALVEDWADWLVHELpKTEDGGFQHVVKer--lNEGE 179 Agrobacterium tumef...
15891801  56 LADPQIGADgtlagydPQEYNIDHILAGRILFPLSAQTGDARYLAAAGHLAGQLRSHP-RTNAGNYWHKKR-----YPHQ 129 Agrobacterium tumef...
15613048  64 YVDGLIDEHgn---fyFARDELDAIQAGLLLFPLYEKTKDSRYEVAARKLRQLLTTIN-RTSEGGYWHKDK-----YPYQ 134 Bacillus halodurans
15613683  59 WFDEYMDYG-------IPPMCVNIVSMGHTLLTLYQHTGEEKYLQLAIEKADYLLHDApRFAEGVFQHTVGggvsvFPEQ 131 Bacillus halodurans
16077767  59 WVDEQLEDG-------LPPLSINGVSIGHTLLFLHKVTGDDVYLETAAEMAEYVLHKApRFGEGILQHTVNaaeyvFPEQ 131 Bacillus subtilis
16080064  69 YADLLIDDNgn---llFRRDELDAIQAGLILFPLYEQTKDERYVKAAKRLRSLYGTLN-RTSEGGFWHKDG-----YPYQ 139 Bacillus subtilis
15893650  53 TMDTFINEDgtingykLEEYNIDHLNNGKILITLFKETGKEKYRKALINLRKQIDNHP-RTKENVFWHKNI-----YPHQ 126 Clostridium acetobu...
16765253  93 WFADRFAEG-------ATTKNVNTMAPFLTLAYRYEETRNPAYLPWLETWAEWAMNEMpRTDHGGMQHITLae--eNHQQ 163 Salmonella typhimur...
16121148  75 YTLHTGFRPg------PNLRFADDLICCQAYLDVWPQIAVPEALEPTIKAVSAMVDEP---KPG------------REDW 133 Yersinia pestis
15891801  56 LADPQIGADgtlagydPQEYNIDHILAGRILFPLSAQTGDARYLAAAGHLAGQLRSHP-RTNAGNYWHKKR-----YPHQ 129 Agrobacterium tumef...
15613048  64 YVDGLIDEHgn---fyFARDELDAIQAGLLLFPLYEKTKDSRYEVAARKLRQLLTTIN-RTSEGGYWHKDK-----YPYQ 134 Bacillus halodurans
15613683  59 WFDEYMDYG-------IPPMCVNIVSMGHTLLTLYQHTGEEKYLQLAIEKADYLLHDApRFAEGVFQHTVGggvsvFPEQ 131 Bacillus halodurans
16077767  59 WVDEQLEDG-------LPPLSINGVSIGHTLLFLHKVTGDDVYLETAAEMAEYVLHKApRFGEGILQHTVNaaeyvFPEQ 131 Bacillus subtilis
16080064  69 YADLLIDDNgn---llFRRDELDAIQAGLILFPLYEQTKDERYVKAAKRLRSLYGTLN-RTSEGGFWHKDG-----YPYQ 139 Bacillus subtilis
15893650  53 TMDTFINEDgtingykLEEYNIDHLNNGKILITLFKETGKEKYRKALINLRKQIDNHP-RTKENVFWHKNI-----YPHQ 126 Clostridium acetobu...
16765253  93 WFADRFAEG-------ATTKNVNTMAPFLTLAYRYEETRNPAYLPWLETWAEWAMNEMpRTDHGGMQHITLae--eNHQQ 163 Salmonella typhimur...
16121148  75 YTLHTGFRPg------PNLRFADDLICCQAYLDVWPQIAVPEALEPTIKAVSAMVDEP---KPG------------REDW 133 Yersinia pestis
15890425 180 LWDDTLFMACLFLARAGVVCKRQDWIDEAVYQFMIHARYLSDPVTGLWY--HGWTFNG----RHNFAD---AFWARGNSW 250 Agrobacterium tumef...
15891801 130 VWLDGLYMGLPFQIEYGQTTGRPELIEDALRQFSAALALTADAG-GLYV--HGYDESRnqrwANPASGkspAIWARAVGW 206 Agrobacterium tumef...
15613048 135 MWLDGLYMAGPFKMKFAQMFNEPELVDHVLYQEQLMRRHTRDPETGLYY--HAWDEKKqmpwADPNTGrsqEVWGRSIGW 212 Bacillus halodurans
15613683 132 AWVDTLFMAGYFLIRMGDALNNQAYMDEGIRQFRGHEKYLQDPETNFYY--HGWDHLS----QSNMSG---IFWARGNAW 202 Bacillus halodurans
16077767 132 AWADTLMMAGLFMLRIGRVMEREDYFEDGLRQFHGHEDVLQDPVTNLYY--HAWDNKA----QNHLSG---IYWGRANGW 202 Bacillus subtilis
16080064 140 MWLDGLYMGGPFALKYANLKQETELFDQVVLQESLMRKHTKDAKTGLFY--HAWDEAKkmpwANEETGcspEFWARSIGW 217 Bacillus subtilis
15893650 127 IWLDGLYMGATFYAKYVKEFGEEKEFDDITHQFIITEKNLKDNKTGLLY--HAYDESKtepwSNSETGlspHFWGRAMGW 204 Clostridium acetobu...
16765253 164 MWDDTLMMTVLPLAKIGKLLNRPEYVEEATYQFLLHVQNLMDKETGLWF--HGWSYDG----HHNFAN---ARWARGNSW 234 Salmonella typhimur...
16121148 134 WWCDSLFMAPATFAALSQRTGDARYLAYMDTAFWDAVDYLRDPDSGLFYrdHRYIPDGtgteLREENGe-kVFWSRGIGW 212 Yersinia pestis
15891801 130 VWLDGLYMGLPFQIEYGQTTGRPELIEDALRQFSAALALTADAG-GLYV--HGYDESRnqrwANPASGkspAIWARAVGW 206 Agrobacterium tumef...
15613048 135 MWLDGLYMAGPFKMKFAQMFNEPELVDHVLYQEQLMRRHTRDPETGLYY--HAWDEKKqmpwADPNTGrsqEVWGRSIGW 212 Bacillus halodurans
15613683 132 AWVDTLFMAGYFLIRMGDALNNQAYMDEGIRQFRGHEKYLQDPETNFYY--HGWDHLS----QSNMSG---IFWARGNAW 202 Bacillus halodurans
16077767 132 AWADTLMMAGLFMLRIGRVMEREDYFEDGLRQFHGHEDVLQDPVTNLYY--HAWDNKA----QNHLSG---IYWGRANGW 202 Bacillus subtilis
16080064 140 MWLDGLYMGGPFALKYANLKQETELFDQVVLQESLMRKHTKDAKTGLFY--HAWDEAKkmpwANEETGcspEFWARSIGW 217 Bacillus subtilis
15893650 127 IWLDGLYMGATFYAKYVKEFGEEKEFDDITHQFIITEKNLKDNKTGLLY--HAYDESKtepwSNSETGlspHFWGRAMGW 204 Clostridium acetobu...
16765253 164 MWDDTLMMTVLPLAKIGKLLNRPEYVEEATYQFLLHVQNLMDKETGLWF--HGWSYDG----HHNFAN---ARWARGNSW 234 Salmonella typhimur...
16121148 134 WWCDSLFMAPATFAALSQRTGDARYLAYMDTAFWDAVDYLRDPDSGLFYrdHRYIPDGtgteLREENGe-kVFWSRGIGW 212 Yersinia pestis
15890425 251 ITVAIPELFELVPTLAGk-DKRFLANVLSSQVRSLRKYQR-EDGMFHTLLDD---PTSPVETSATAGIAYGILRGIEAGI 325 Agrobacterium tumef...
15891801 207 LAMALVDALVILPDDS---ATAELRERTRRLLAGIIARQT-QAGLWMQVLDNqglAGNYAETSASAMFAYALLRAARLGL 282 Agrobacterium tumef...
15613048 213 YGMALVDIIEDLPEGHP--SRHELTKVVTDYVDTISRYQDpDHGYWYQIVDKgerKENWPESSGTCLFLYTIAKGMNLGI 290 Bacillus halodurans
15613683 203 AAYTMAASLRMIDVKEP--AFMEIHGSLRDLMSALLNVQS-EQGLWHTILTD---PSSYEETSGSAGIAAALVL---QGA 273 Bacillus halodurans
16077767 203 AALTMAKALPLIEVTHP--SFMIIDGSLRDQLSALVRLQD-ESGLWHTILDD---PDSYLEVSASAGIASALMS---SGK 273 Bacillus subtilis
16080064 218 YVMSLADMIEELPKKHP--NRHVWKNTLQDMIKSICRYQDkETGLWYQIVDKgdrSDNWLESSGSCLYMYAIAKGINKGY 295 Bacillus subtilis
15893650 205 YVMALADTIEVLPKNHK--DRNALIKILNNCVTALLKVQDnASKVWYQVLDEgerKGNYLEASGSSMIVYALLKGVRLGY 282 Clostridium acetobu...
16765253 235 LTIVIPDFLELLDLPENnaVRRYLVQVLNAQIAALAKCQD-ESGLWHTLLDD---PHSYLEASATAGFAYGILKAVRKRY 310 Salmonella typhimur...
16121148 213 VLAAIPRLLARMPEDYT--GRQRYLDLFTDLADNVIRYQQ-ADGLWRTSLLDp-qRFPAPESSATALFCYGLSWGINQGI 288 Yersinia pestis
15891801 207 LAMALVDALVILPDDS---ATAELRERTRRLLAGIIARQT-QAGLWMQVLDNqglAGNYAETSASAMFAYALLRAARLGL 282 Agrobacterium tumef...
15613048 213 YGMALVDIIEDLPEGHP--SRHELTKVVTDYVDTISRYQDpDHGYWYQIVDKgerKENWPESSGTCLFLYTIAKGMNLGI 290 Bacillus halodurans
15613683 203 AAYTMAASLRMIDVKEP--AFMEIHGSLRDLMSALLNVQS-EQGLWHTILTD---PSSYEETSGSAGIAAALVL---QGA 273 Bacillus halodurans
16077767 203 AALTMAKALPLIEVTHP--SFMIIDGSLRDQLSALVRLQD-ESGLWHTILDD---PDSYLEVSASAGIASALMS---SGK 273 Bacillus subtilis
16080064 218 YVMSLADMIEELPKKHP--NRHVWKNTLQDMIKSICRYQDkETGLWYQIVDKgdrSDNWLESSGSCLYMYAIAKGINKGY 295 Bacillus subtilis
15893650 205 YVMALADTIEVLPKNHK--DRNALIKILNNCVTALLKVQDnASKVWYQVLDEgerKGNYLEASGSSMIVYALLKGVRLGY 282 Clostridium acetobu...
16765253 235 LTIVIPDFLELLDLPENnaVRRYLVQVLNAQIAALAKCQD-ESGLWHTLLDD---PHSYLEASATAGFAYGILKAVRKRY 310 Salmonella typhimur...
16121148 213 VLAAIPRLLARMPEDYT--GRQRYLDLFTDLADNVIRYQQ-ADGLWRTSLLDp-qRFPAPESSATALFCYGLSWGINQGI 288 Yersinia pestis
15890425 326 LGEENR----PHAERALKAVLGNIDDEGVVHGVSDGTPMGHDLDFYRR----------IPNLPTPYGQALTMLLLIDVFL 391 Agrobacterium tumef...
15891801 283 LRGEEAkaalSAGRQALAALLETRLELDEQGVARLTGIVHVAGLGGFDgnyrdgtpdyYLTEPVVSDDAKGVGPLMMAYA 362 Agrobacterium tumef...
15613048 291 FDHRYV----TQLRKGYQGLVDHFVKIDKDGNVTISGICIGTSCGVYDy---------YVGRETSENDLHGVGAFLLASV 357 Bacillus halodurans
15613683 274 NTPKGH----HAAQRAFDALLEKVDARGTVLGVSTGTAVMNHADGYRMt---------PNRRIEGWGQGLALTFFSHVLM 340 Bacillus halodurans
16077767 274 LYTK-------YVQKSLAAILDAVEEDGRVSRVSAGTAVMKNAEGYKQv---------PYKRIQGWGQGLALTFLADVLK 337 Bacillus subtilis
16080064 296 LDRAYE----TTLLKAYQGLIQHKTETSEDGAFLVKDICVGTSAGFYDy---------YVSRERSTNDLHGAGAFILAMT 362 Bacillus subtilis
15893650 283 LPESLK----ETAKEAYKGLINEFILETKDGLINLNKICYVAGLGGKDkrdg--sfayYISEPIVSNEPKGLGPFLLASY 356 Clostridium acetobu...
16765253 311 VERHYA----QVAEKAIRGIVKHISPEGELLQTSFGTGMGHDLDFYRH----------IPLTSMPYGQAMAMLCLTEYLR 376 Salmonella typhimur...
16121148 289 LAPETYl---PVVEKAWDALQGCIHDNGMMGWVQLPAFNPRDVKFEHN-------------------MDYGAGAYLLAAS 346 Yersinia pestis
15891801 283 LRGEEAkaalSAGRQALAALLETRLELDEQGVARLTGIVHVAGLGGFDgnyrdgtpdyYLTEPVVSDDAKGVGPLMMAYA 362 Agrobacterium tumef...
15613048 291 FDHRYV----TQLRKGYQGLVDHFVKIDKDGNVTISGICIGTSCGVYDy---------YVGRETSENDLHGVGAFLLASV 357 Bacillus halodurans
15613683 274 NTPKGH----HAAQRAFDALLEKVDARGTVLGVSTGTAVMNHADGYRMt---------PNRRIEGWGQGLALTFFSHVLM 340 Bacillus halodurans
16077767 274 LYTK-------YVQKSLAAILDAVEEDGRVSRVSAGTAVMKNAEGYKQv---------PYKRIQGWGQGLALTFLADVLK 337 Bacillus subtilis
16080064 296 LDRAYE----TTLLKAYQGLIQHKTETSEDGAFLVKDICVGTSAGFYDy---------YVSRERSTNDLHGAGAFILAMT 362 Bacillus subtilis
15893650 283 LPESLK----ETAKEAYKGLINEFILETKDGLINLNKICYVAGLGGKDkrdg--sfayYISEPIVSNEPKGLGPFLLASY 356 Clostridium acetobu...
16765253 311 VERHYA----QVAEKAIRGIVKHISPEGELLQTSFGTGMGHDLDFYRH----------IPLTSMPYGQAMAMLCLTEYLR 376 Salmonella typhimur...
16121148 289 LAPETYl---PVVEKAWDALQGCIHDNGMMGWVQLPAFNPRDVKFEHN-------------------MDYGAGAYLLAAS 346 Yersinia pestis
15890425 392 KRPKAS 397 Agrobacterium tumefaciens str. C58 (Cereon)
15891801 363 ESLLLA 368 Agrobacterium tumefaciens str. C58 (Cereon)
15613048 358 ECARAL 363 Bacillus halodurans
15613683 341 RYTETE 346 Bacillus halodurans
16077767 338 TKKRLY 343 Bacillus subtilis
16080064 363 ELEPLF 368 Bacillus subtilis
15893650 357 EYETL- 361 Clostridium acetobutylicum
16765253 377 NYF--- 379 Salmonella typhimurium LT2
16121148 347 EMLRLA 352 Yersinia pestis
15891801 363 ESLLLA 368 Agrobacterium tumefaciens str. C58 (Cereon)
15613048 358 ECARAL 363 Bacillus halodurans
15613683 341 RYTETE 346 Bacillus halodurans
16077767 338 TKKRLY 343 Bacillus subtilis
16080064 363 ELEPLF 368 Bacillus subtilis
15893650 357 EYETL- 361 Clostridium acetobutylicum
16765253 377 NYF--- 379 Salmonella typhimurium LT2
16121148 347 EMLRLA 352 Yersinia pestis
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