Conserved Protein Domain Family
VirB10

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COG2948: VirB10 (this model, PSSM-Id:225499 is obsolete and has been replaced by 442191)
Type IV secretory pathway, VirB10 components [Intracellular trafficking, secretion, and vesicular transport]
Statistics
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PSSM-Id: 225499
Aligned: 23 rows
Threshold Bit Score: 254.702
Created: 7-Oct-2002
Updated: 23-Jan-2015
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
15604160   9 NNTDSLSGADLpEVQRELSKVSVSFNKNIAIVVVICAILiYIFYTLFVSTKKEEIPETKIPSNiVKPVTDVddiipeIPK 88  Rickettsia prowazekii
15644672     --------------------------------------------------------------------------------     Helicobacter pylori...
15644673     --------------------------------------------------------------------------------     Helicobacter pylori...
15892312   9 HNTGSLSGADSpEVQRELSKVSVSFNKSIAIVVVICGIFiYIFYTLFFGTEKEEIPETQIPSNiVKPVTEVddnipeIPK 88  Rickettsia conorii
17547294  13 QAGKVAPEAVA-LRAQPRPVTRLNRRTLAILAGTLSVAV-LGALMWSLQP-QRRGAGEQTELYnVERVSKSe----gLDA 85  Ralstonia solanacearum
15838642  15 SKPRSGVRRVNnLPLIIGIVALCLFALLIAKVAVKRMHN-VAVAHSDTQKVSKKNIDTSTMANeVLSGHGSglipsaMPE 93  Xylella fastidiosa ...
10956751  17 SKPRSGVRRVNnLPLIIGIVALCLFALLIAKVAIKRMNNkVAVAHSDTKKESKKNIDTSTMANeVLSGHGPglipsaMPE 96  Xylella fastidiosa ...
13488452   2 NEQDTAVEPMR-LRADPPRVTRLSRKMLAGIGFVASLGI-GGALIYALR--DADTVKQGEELYpTSNRPPAd----gLAR 73  Mesorhizobium loti
13475359  14 TPPKLDPEQLQ-LRASPRRAVRFRRGVIIAIAAVGSGAI-LGVTMMALQGPAWRIKHQAEDRYnTERKPPAe----gLEA 87  Mesorhizobium loti
13475788     --------------------------------------------------------------------------------     Mesorhizobium loti
15604160  89 LPDPPklerp--------ivspPPPPPPPVVEVPPVLPP-IAVEGNKDK------------------------TLQLPPV 135 Rickettsia prowazekii
15644672     --------------------------------------------------------------------------------     Helicobacter pylori...
15644673     --------------------------------------------------------------------------------     Helicobacter pylori...
15892312  89 LPDPPklet----------ptaPPPPPPPVVKVPPVLPPtTPVEENKDK------------------------TLPLPPV 134 Rickettsia conorii
17547294  86 LPADYsklppp-----lpasvpELGPPLPGDLGPAIVKShQPMTAAYAApgh------------------dpnDALRKEA 142 Ralstonia solanacearum
15838642  94 VPPAVsatagipiapvnnpdapPMPPHHPDSLSAPVNPDeQQLRMAKLQqfqeaikanskitlpydgsgsgstSMTSRGA 173 Xylella fastidiosa ...
10956751  97 VPPAVsgtagipiapvnnpdapPMPPHQPDSLSAPVNPDeQQLRMAKLQqfqeaikanskialpyegggsgstSMTSRGA 176 Xylella fastidiosa ...
13488452  74 LPRDYag--------------pVLGPPLPGDLGRPILDAqNRGQAVVPPpiaspa-------------ideaeQRRRAEE 126 Mesorhizobium loti
13475359  88 LPKDYsgim---------pkapVLGPPLPGDLGRPILERqRQLGIAPgqdi------------------saeeQRLAQQA 140 Mesorhizobium loti
13475788     --------------------------------------------------------------------------------     Mesorhizobium loti
15604160 136 SLPTTSGTLVESDAEKQRR------------------------EAKRKSAIVLVGGVAPKKTPEQMTEAVTFKDRGDMF- 190 Rickettsia prowazekii
15644672     --------------------------------------------------------------------------------     Helicobacter pylori...
15644673   1 ------------------------------------------------------MDNPKGIDGFTNLKEKDIATNENKLl 26  Helicobacter pylori...
15892312 135 SLPSTSGTLVESDAEKQRR------------------------EAKRKSAIVLIGGVEPKKTPEQITAETTFKDRGDMS- 189 Rickettsia conorii
17547294 143 EAAAASSVFFRLGSQAAPVaqtqvaaap------dfaanaafdRLAAGPASTAAQPADPTAVQNLQDQKEAFQKAG-NTe 215 Ralstonia solanacearum
15838642 174 SATATPQSREEMLAQIAKVrrqidenaaggdltssyqaqlariRASLGNGDGGSESSPHLLQVSASSSNKDFSQFANNGq 253 Xylella fastidiosa ...
10956751 177 SATATPQSREEMLAQIAKVrrqidenaaggdltnsyqaqlariRASLDNGDGGSESSPHLLQVSAPSSNKDFSQFANNGq 256 Xylella fastidiosa ...
13488452 127 EAARTSRVFFQTAQDDT--------------------------RTAEASAPTGNDLAGQNNQRNAQDRQLSFLSAAADRr 180 Mesorhizobium loti
13475359 141 IEARESQVLFRIDNRPRQTdvagggps---------aqqpseaLPQSGATRTSASVAPAEGDQNNQQRKLDFVSQR-NTs 210 Mesorhizobium loti
13475788     --------------------------------------------------------------------------------     Mesorhizobium loti
15604160 191 ----------------LLLGRGKLIDAVLETGINSDLGGEIRAIISRDVFS-EKGKVILIPKGSKIFGKYAtSTSSDSYG 253 Rickettsia prowazekii
15644672   1 ----------------------------------------------------------------------M-NKWLKGAI 9   Helicobacter pylori...
15644673  27 ----------------rTITADKMIPAFLITPISSQIAGKVIAQVESDIFA-HMGKAVLIPKGSKVIGYYS-NNNKMGEY 88  Helicobacter pylori...
15892312 190 ----------------LVLGRGKLIDAVLETAINSDLGGEIRAIISRDVFS-EKDKVILIPKGSKIFGKYAtSTSSDSYG 252 Rickettsia conorii
17547294 216 trnsgn---ltlpaspYQVMAGTVVAGALVTGIKSDLPGDVIATVTEPVYDtATGRFLLIPQGSRILGKYN-SQVSYGQS 291 Ralstonia solanacearum
15838642 254 gdrwkldqeiqaprssFEIRAGGVIPGVMISGVNSDLPGQIMGQVAQDVYDtATGKYLLIPQGTRLVGMYN-SNVGYGQG 332 Xylella fastidiosa ...
10956751 257 gdrwkldqeiqaprssFEIRAGGVIPGVMISGVNSDLPGQIMGQVAQDVYDtATGKYLLIPQGTRLVGMYN-SNVGYGQG 335 Xylella fastidiosa ...
13488452 181 tvapdh---vtppaspYVLQAGAVIPAALITGIRSDLPGQISAQVTENIYDsPTGRSLLIPQGTRAIGQYD-NAVGSGQR 256 Mesorhizobium loti
13475359 211 giynpha--lqtpaspYQLMAGSVIAASLVTGINSDLPGLVVAQVTENVHDtVTGSIVLIPQGSRLIGTYD-SVVAFGQR 287 Mesorhizobium loti
13475788   1 ------------------------------MRKIAYIVAVFKGVMTENVYDsPTGRSLLIPQGTRVIGQYD-NGVGFGQR 49  Mesorhizobium loti
15604160 254 RVSIIWDRVDLTNGYTIEFD-SPAVDNLGRPG----LQGRVDNKYKEQFANAVLQSGFNIGLAKILDKLVPPPIDSQAAA 328 Rickettsia prowazekii
15644672  10 VFVGGFATIIT---ISLIYHqKPKAPLNNQPs----LLNDDEVKY--PLQDYTFTQ-----NPQPTNTESSKDATIKALQ 75  Helicobacter pylori...
15644673  89 RLDIVWSRIITPHGINIMLTnAKGADIKGYNGlvgeLIERNFQRYGVPLLLSTLTNGLLIGITSALNNRGNKEGATNFFG 168 Helicobacter pylori...
15892312 253 RVSIIWDRIDLTSGYTIEFD-SPAVDNLGRPG----LQGRVDNKYKEQFANAVLQSGFNIGLAKVLDKLVPPPIASQAAA 327 Rickettsia conorii
17547294 292 RVQVVWNRIILPDTSSLTLDnLAGTDPAGYAG----LEDDVDYHWGRIFAGAALTTLLGVGAELAAPENRQDGNRIVIAG 367 Ralstonia solanacearum
15838642 333 AILIAWQRLVFPDGKALDISaMPGADNAGYAG----FRDQANHHYTRIFGSALLMSGVTAASSYAMDRNRNNGG-IYSQP 407 Xylella fastidiosa ...
10956751 336 AILIAWQRLVFPDGKALDISaMPGADNAGYAG----FRDQANHHYTRIFGSALLMSGVTAASSYATDRNRNNSG-IYSQP 410 Xylella fastidiosa ...
13488452 257 RVLLVWNRLIFPNGRSIVLErQPGADAQGYAG----LEDGVDYHWGELFKAAALSTVLSVGAQAGSSDQDSD---IVRAL 329 Mesorhizobium loti
13475359 288 RALLVWQRIILPDGSSIEIDnLPATDTAGYAG----LEDKVDFHTWQLIKGVALATLLGVGTELSFGENESD---LVKAI 360 Mesorhizobium loti
13475788  50 RVLLVWSRLVFPNGRSIVLErQPGTDAQGYAG----LEDGVDYHWGELFNAAALTTILSVGAEAGSSGQESD---IVRAL 122 Mesorhizobium loti
15604160 329 TNsatatqilNVAQTISSNTAMDv-nTRIVTICTNILAAITDKTSIAYAtmtqacttaqnassahtseqrlqtliqavnt 407 Rickettsia prowazekii
15644672  76 EQl-------KAALKALNSKEMNhskEETFKN-----PPIDLKQ-TQ--------------------------------- 109 Helicobacter pylori...
15644673 169 DYl-------LMQLMRQSGMGINqvvNQILRDKSKIAPIVVIREGSRVF------------------------------- 210 Helicobacter pylori...
15892312 328 TNsatakqllNIAQTIASNTAMDa-nTRIVTICTNILAAITDKTSTAYTtmtqacttaqtassantaeqrlqtlvqavnt 406 Rickettsia conorii
17547294 368 RD--------SAQDSIN---QVG---QEMTRRNMNIQPTLTERPGLPVR------------------------------- 402 Ralstonia solanacearum
15838642 408 TA--------SSELSQALGQQLGnvtAQMISKNLNIAPTLQIRPGYRFN------------------------------- 448 Xylella fastidiosa ...
10956751 411 TA--------SSELSQALGQQLGnvtAQMISKNLNIAPTLQIRPGYRFN------------------------------- 451 Xylella fastidiosa ...
13488452 330 RS--------GASDSVS---QVG---QQVVQQQLDMAPTLTVRPGFPVR------------------------------- 364 Mesorhizobium loti
13475359 361 RE--------STQQNIS---QAG---QRITEKNLNIQPTIIVRPGWPLR------------------------------- 395 Mesorhizobium loti
13475788 123 RG--------GASDSLS---QVG---QQIVQRQLNIAPTLTIRPGVNVR------------------------------- 157 Mesorhizobium loti
15604160 408 aasnLLTTTSIASTPTQAQQAS 429 Rickettsia prowazekii
15644672 110 ----T-PLKKTFL---QSNGIY 123 Helicobacter pylori 26695
15644673 211 ----ISPNTDIFFPIPRENEVI 228 Helicobacter pylori 26695
15892312 407 aassLLTTTSIASTPTQAQQAS 428 Rickettsia conorii
17547294 403 ----IIVNRDL-VLRPYQPLFF 419 Ralstonia solanacearum
15838642 449 ----IIIVKDLNFTKPYKSFDY 466 Xylella fastidiosa 9a5c
10956751 452 ----IIIVKDLNFTKPYKSFDY 469 Xylella fastidiosa 9a5c
13488452 365 ----VLVTRDL-VLEPYGG--- 378 Mesorhizobium loti
13475359 396 ----VIVHKDL-VLRPYPT--- 409 Mesorhizobium loti
13475788 158 ----VVVTRDL-MLEPYGG--- 171 Mesorhizobium loti
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