Conserved Protein Domain Family
NIP7

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COG1374: NIP7 (this model, PSSM-Id:224293 is obsolete and has been replaced by 440985)
Rbosome biogenesis protein Nip4, contains PUA domain [Translation, ribosomal structure and biogenesis]
Statistics
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PSSM-Id: 224293
Aligned: 9 rows
Threshold Bit Score: 152.569
Created: 7-Oct-2002
Updated: 2-Oct-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
7674416   15 LHmqGEEEGLSRYRLRPPTPREERLVEGFLRAIGFKVNPYAEGMTVLDPGgkFKEVFYLPWGLRRAVERL-PLHYSAGLN 93  Aeropyrum pernix
7674401    1 ------------MAFRQPNTKELKVIRKALSYYGSGDFLSHYALLVKEGE--KKEVYGVSKELYGVIGELnPHYAGVKIG 66  Archaeoglobus fulgidus
19074676   1 MR--DLKPEEEKEVLKKLRFFIGDNVHRILSGE---DRLFLH----NQR---VMILSERMRAATSMISRKnLGMVGTVIG 68  Encephalitozoon cun...
7674436    1 ------------MKVRKLKNAEINLIEEELSKY--TDKDFVKSFKYENLI--VLEGKWLTVCYTNIETIKkLNMFQDIFS 64  Methanocaldococcus ...
20094046   1 -----MKPELKRVPREELESIANEMARKFNCERVASVVRSFHLIKLEGRWteYFVVNRVDFDPADLPERAdPFLVGRPFC 75  Methanopyrus kandle...
14520473   1 --------MSGELRVRRASSWELDLILKEAEKYGELLHEFFCVVEGKYRD--VYAVNEEVWKIIEDINMR-PYSLGTFVG 69  Pyrococcus abyssi
7674411    1 MRigKRRKMSGELRVRRVSSWEFDLILREAEKYGELSHEFFSIVEGEYRD--VYAVNESVWKLVEKLPLK-PYSLGTFVG 77  Pyrococcus horikoshii
19075218   1 MR--PLTHEETKTFFEKLAQYIGKNITHLIDRP-DDPHCFR--LQ-KDR---VYYVSERAMKMATSVARQnLMSLGICFG 71  fission yeast
13878590   1 MR--QLTEEETKVVFEKLAGYIGRNISFLVDNK-ELPHVFR--LQ-KDR---VYYVPDHVAKLATSVARPnLMSLGICLG 71  baker's yeast
7674416   94 lGSIGERGFRPSLHLARELAPLCgspVKCIRLSPRGEKLFLYS----RDVYGDNIAS-HTSGAALVVGSNGQPLGWGVGL 168 Aeropyrum pernix
7674401   67 ---EVGRRFRFSLEGTFWLLRNS---RNRVWVNERGEMLFLYGrd-iFAGSVERASEfGENSIVFVCNRFDDVLGIGRSR 139 Archaeoglobus fulgidus
19074676  69 -KFTKSGSFRLGVASLNLLSRWA---IHKVWIKNSAEMNYVYGnnalKSHVFRISEGiPINSGVFVFNQHDVPLGFGITA 144 Encephalitozoon cun...
7674436   65 vGNVFGEIKRKFRLSLEGFTLISp-nIINNYAIVNEKAEALFLy--gRDIFKESIIEvKGFGRIAVFNKNREFLGIGLFD 141 Methanocaldococcus ...
20094046  76 -ERSARGDLRIHVEGARELARRVd--EIKTYVTERAAVLFTYGrdvlPESIVEIRGPkEPRLVAVVYRDDLGEHCVGVGR 152 Methanopyrus kandle...
14520473  70 tIRVDENLVEKFYPNLEFFSLIK---LEKNYVILGPKASFLFTt--gKDAPKEAVREiKWQGSKRVVVLNDLGDIIGIGL 144 Pyrococcus abyssi
7674411   78 tIRVDDNLVEKFYPNIEFFSLVK---VTKNYAVLGPKASFLFTt--gKDVPKRAVKKlNWQGSRKILIYNDLGDIIGIGM 152 Pyrococcus horikoshii
19075218  72 -KFTKTNKFRLHITALDYIAQYA---RYKIWVKSNGEMPFLYGnhvlKAHVGRITDDtPQHQGVVIYSMNDTPLGFGVTA 147 fission yeast
13878590  72 -KFTKTGKFRLHITSLTVLAKHA---KYKIWIKPNGEMPFLYGnhvlKAHVGKMSDDiPEHAGVIVFAMNDVPLGFGVSA 147 baker's yeast
7674416  169 SR---DGLLIVKP-----LRDLGWYLRRGG 190 Aeropyrum pernix
7674401  140 HSsdeLSNLPEDKvfvenLVDRGEYLRHQK 169 Archaeoglobus fulgidus
19074676 145 LSpqgYSAAKGHAlailrQSDTGEYVRNEA 174 Encephalitozoon cuniculi
7674436  142 G------KIIKN------IKDKGWYLREGG 159 Methanocaldococcus jannaschii
20094046 153 LRfseDGRPVVDN-----VIDRGWYLRRGG 177 Methanopyrus kandleri AV19
14520473 145 INpksDRRFIKN------LKDVGEFLRR-- 166 Pyrococcus abyssi
7674411  153 INprnDEKFIKN------LKDVGEFLRR-- 174 Pyrococcus horikoshii
19075218 148 RStleLRRLEPTAivafhQADVGEYLRDED 177 fission yeast
13878590 148 KStseSRNMQPTGivafrQADIGEYLRDED 177 baker's yeast
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